WP_TGFBETA_SIGNALING_IN_THYROID_CELLS_FOR_EPITHELIALMESENCHYMAL_TRANSITION Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 FN1 Fibronectin [1] 0.91[2] 0.88[3] 0.89[4] 0.49[5] 0.68[6] 0.79[7]
2 VIM Vimentin [8] -10.92[9] -10.88[10] -5.11[11] 0.17[12] -0.42[13] -2.74[14]
3 AKT1 RAC-alpha serine/threonine-protein kinase [15] -2.50[16] -2.24[17] -3.20[18] -2.48[19] -2.47[20] -1.75[21]
4 ID1 DNA-binding protein inhibitor ID-1 [22] -0.60[23] -0.85[24] -1.13[25] -2.11[26] -1.88[27] -2.69[28]
5 CDH2 Cadherin-2 [29] -2.44[30] -3.89[31] -2.95[32] -0.64[33] -2.27[34] -1.54[35]
6 CDH1 Cadherin-1 [36] -1.46[37] -0.49[38] 0.16[39] -5.60[40] -9.86[41] 0.06[42]
7 MAPK1 Mitogen-activated protein kinase 1 [43] -0.87[44] -0.24[45] -0.30[46] -0.58[47] -0.94[48] 0.27[49]
8 SMAD3 Mothers against decapentaplegic homolog 3 [50] -0.65[51] -0.76[52] -0.42[53] -0.63[54] 0.24[55] -1.29[56]
9 MAPK3 Mitogen-activated protein kinase 3 [57] -0.73[58] -0.19[59] -0.04[60] -2.00[61] -1.99[62] -2.54[63]
10 SMAD4 Mothers against decapentaplegic homolog 4 [64] -1.18[65] -0.07[66] 0.02[67] -0.52[68] -0.16[69] 1.29[70]
11 SNAI2 Zinc finger protein SNAI2 [71] -7.79[72] -8.27[73] -9.86[74] -2.33[75] 0.67[76] -2.11[77]
12 SMAD2 Mothers against decapentaplegic homolog 2 [78] -0.56[79] 0.19[80] -0.19[81] -0.05[82] 0.13[83] 1.07[84]
13 TNC Tenascin [85] -9.39[86] -8.55[87] -7.54[88] 1.96[89] 1.18[90] -1.45[91]
14 TGFB1 Transforming growth factor beta-1 [92] 0.89[93] 0.34[94] -2.29[95] 1.41[96] 0.63[97] -2.73[98]
15 CDH16 Cadherin-16 [99] -1.44[100] 1.95[101] -8.27[102] -4.73[103] -11.18[104] -8.56[105]
16 SNAI1 Zinc finger protein SNAI1 [106] 0.49[107] -0.70[108] 1.48[109] 0.59[110] -0.14[111] -0.45[112]
17 CDH6 Cadherin-6 [113] -6.13[114] -4.96[115] -3.05[116] 3.60[117] -4.95[118] 0.98[119]
18 RUNX2 Runt-related transcription factor 2 [120] -3.43[121] -3.29[122] 1.89[123] 4.69[124] 6.64[125] 2.12[126]
[1]
ref_hepatocyte FN1
Mean 152
Standard deviation 1.4e+02
Values 27 3.8e+02 1.7e+02 1.3e+02 57
[2]
HepG2 FN1
Mean 3.78e+03
Standard deviation 3.9e+02
Values 3.5e+03 4.1e+03
[3]
HepG2.C3A FN1
Mean 2.34e+03
Standard deviation 1.3e+03
Values 1.4e+03 3.2e+03
[4]
HuH.7 FN1
Mean 2.08e+03
Standard deviation 9.6e+02
Values 1.3e+03 3.1e+03 1.8e+03
[5]
SNU475 FN1
Mean 2.11e+03
Standard deviation 1.4e+02
Values 2.2e+03 2e+03
[6]
THLE FN1
Mean 2.73e+03
Standard deviation 1.5e+03
Values 1.7e+03 3.8e+03
[7]
liver FN1
Mean 1.06e+03
Standard deviation 3.8e+02
Values 1.4e+03 1.3e+03 5.9e+02 9.3e+02
[8]
ref_hepatocyte VIM
Mean 54.6
Standard deviation 63
Values 1.3e+02 14 12 0.056 1.2e+02
[9]
HepG2 VIM
Mean 0.371
Standard deviation 0.34
Values 0.13 0.61
[10]
HepG2.C3A VIM
Mean 0.244
Standard deviation 0.11
Values 0.32 0.17
[11]
HuH.7 VIM
Mean 11.7
Standard deviation 9.3
Values 5.1 22 7.7
[12]
SNU475 VIM
Mean 609
Standard deviation 37
Values 5.8e+02 6.4e+02
[13]
THLE VIM
Mean 455
Standard deviation 1.6e+02
Values 3.4e+02 5.7e+02
[14]
liver VIM
Mean 32.8
Standard deviation 5.9
Values 24 35 37 35
[15]
ref_hepatocyte AKT1
Mean 37.6
Standard deviation 15
Values 19 32 31 55 50
[16]
HepG2 AKT1
Mean 87.8
Standard deviation 2.3
Values 86 89
[17]
HepG2.C3A AKT1
Mean 66.6
Standard deviation 2.4
Values 68 65
[18]
HuH.7 AKT1
Mean 30.2
Standard deviation 6.6
Values 35 23 33
[19]
SNU475 AKT1
Mean 66.6
Standard deviation 14
Values 57 76
[20]
THLE AKT1
Mean 75.8
Standard deviation 6.1
Values 72 80
[21]
liver AKT1
Mean 45.1
Standard deviation 25
Values 79 48 34 20
[22]
ref_hepatocyte ID1
Mean 25.6
Standard deviation 18
Values 6 19 54 18 32
[23]
HepG2 ID1
Mean 223
Standard deviation 36
Values 2e+02 2.5e+02
[24]
HepG2.C3A ID1
Mean 119
Standard deviation 49
Values 1.5e+02 85
[25]
HuH.7 ID1
Mean 86.7
Standard deviation 43
Values 1.2e+02 39 97
[26]
SNU475 ID1
Mean 58.5
Standard deviation 3.9
Values 56 61
[27]
THLE ID1
Mean 77.8
Standard deviation 7.4
Values 73 83
[28]
liver ID1
Mean 15.9
Standard deviation 2
Values 18 13 16 16
[29]
ref_hepatocyte CDH2
Mean 22
Standard deviation 20
Values 13 11 5.8 24 57
[30]
HepG2 CDH2
Mean 53.5
Standard deviation 16
Values 65 42
[31]
HepG2.C3A CDH2
Mean 12.4
Standard deviation 2.2
Values 11 14
[32]
HuH.7 CDH2
Mean 21
Standard deviation 4.1
Values 17 25 21
[33]
SNU475 CDH2
Mean 139
Standard deviation 40
Values 1.1e+02 1.7e+02
[34]
THLE CDH2
Mean 50.8
Standard deviation 21
Values 36 65
[35]
liver CDH2
Mean 30.4
Standard deviation 3.9
Values 32 34 30 25
[36]
ref_hepatocyte CDH1
Mean 11.8
Standard deviation 5.8
Values 5.3 11 9.8 21 12
[37]
HepG2 CDH1
Mean 56.4
Standard deviation 15
Values 67 46
[38]
HepG2.C3A CDH1
Mean 70.2
Standard deviation 25
Values 52 88
[39]
HuH.7 CDH1
Mean 97
Standard deviation 24
Values 76 1.2e+02 91
[40]
SNU475 CDH1
Mean 2.4
Standard deviation 1.6
Values 1.3 3.5
[41]
THLE CDH1
Mean 0.141
Standard deviation 0.026
Values 0.16 0.12
[42]
liver CDH1
Mean 49.4
Standard deviation 8.2
Values 60 45 41 52
[43]
ref_hepatocyte MAPK1
Mean 10.7
Standard deviation 3.7
Values 13 7.4 6.1 14 13
[44]
HepG2 MAPK1
Mean 77.6
Standard deviation 22
Values 93 62
[45]
HepG2.C3A MAPK1
Mean 76.1
Standard deviation 7.2
Values 81 71
[46]
HuH.7 MAPK1
Mean 64.8
Standard deviation 7.4
Values 61 60 73
[47]
SNU475 MAPK1
Mean 71.1
Standard deviation 8
Values 65 77
[48]
THLE MAPK1
Mean 62.4
Standard deviation 14
Values 53 72
[49]
liver MAPK1
Mean 52.3
Standard deviation 14
Values 61 68 39 41
[50]
ref_hepatocyte SMAD3
Mean 5.99
Standard deviation 4.6
Values 13 2.2 1.9 4.8 8.4
[51]
HepG2 SMAD3
Mean 50.4
Standard deviation 14
Values 40 60
[52]
HepG2.C3A SMAD3
Mean 29.5
Standard deviation 11
Values 22 37
[53]
HuH.7 SMAD3
Mean 33.2
Standard deviation 6.9
Values 28 41 31
[54]
SNU475 SMAD3
Mean 38.2
Standard deviation 2.7
Values 36 40
[55]
THLE SMAD3
Mean 78.9
Standard deviation 8.4
Values 73 85
[56]
liver SMAD3
Mean 9.85
Standard deviation 3
Values 13 7.4 12 7.1
[57]
ref_hepatocyte MAPK3
Mean 4.16
Standard deviation 1.3
Values 3.6 3.3 6 5.1 2.8
[58]
HepG2 MAPK3
Mean 33.1
Standard deviation 5.2
Values 29 37
[59]
HepG2.C3A MAPK3
Mean 30.4
Standard deviation 12
Values 22 39
[60]
HuH.7 MAPK3
Mean 30
Standard deviation 4.8
Values 32 25 34
[61]
SNU475 MAPK3
Mean 10.2
Standard deviation 2.4
Values 8.5 12
[62]
THLE MAPK3
Mean 11.6
Standard deviation 1.1
Values 11 12
[63]
liver MAPK3
Mean 2.87
Standard deviation 2.4
Values 0.82 0.81 5 4.8
[64]
ref_hepatocyte SMAD4
Mean 3.16
Standard deviation 0.71
Values 4.2 3.4 2.4 2.9 2.8
[65]
HepG2 SMAD4
Mean 18.3
Standard deviation 3.2
Values 21 16
[66]
HepG2.C3A SMAD4
Mean 25.2
Standard deviation 3
Values 23 27
[67]
HuH.7 SMAD4
Mean 23.6
Standard deviation 3.4
Values 20 27 24
[68]
SNU475 SMAD4
Mean 21.8
Standard deviation 2.7
Values 20 24
[69]
THLE SMAD4
Mean 31.4
Standard deviation 1.4
Values 30 32
[70]
liver SMAD4
Mean 31
Standard deviation 13
Values 44 40 23 16
[71]
ref_hepatocyte SNAI2
Mean 2.6
Standard deviation 2.6
Values 5.6 0.99 0.6 0.56 5.3
[72]
HepG2 SNAI2
Mean 0.155
Standard deviation 0.041
Values 0.18 0.13
[73]
HepG2.C3A SNAI2
Mean 0.0706
Standard deviation 0.024
Values 0.054 0.087
[74]
HuH.7 SNAI2
Mean 0.0207
Standard deviation 0.026
Values 0 0.013 0.049
[75]
SNU475 SNAI2
Mean 5.1
Standard deviation 1.7
Values 6.3 3.9
[76]
THLE SNAI2
Mean 46.3
Standard deviation 2.1
Values 45 48
[77]
liver SNAI2
Mean 2.42
Standard deviation 1.9
Values 0.44 1.4 3.2 4.6
[78]
ref_hepatocyte SMAD2
Mean 2.54
Standard deviation 1.2
Values 1.9 1.6 1.9 4.5 2.8
[79]
HepG2 SMAD2
Mean 22.7
Standard deviation 2.3
Values 24 21
[80]
HepG2.C3A SMAD2
Mean 24.2
Standard deviation 1.1
Values 23 25
[81]
HuH.7 SMAD2
Mean 16.4
Standard deviation 1.6
Values 15 18 17
[82]
SNU475 SMAD2
Mean 24.3
Standard deviation 3.3
Values 22 27
[83]
THLE SMAD2
Mean 31
Standard deviation 0.65
Values 31 32
[84]
liver SMAD2
Mean 21.4
Standard deviation 6.7
Values 25 29 17 15
[85]
ref_hepatocyte TNC
Mean 2.48
Standard deviation 3.4
Values 7.4 0.15 0.17 0 4.7
[86]
HepG2 TNC
Mean 0.0487
Standard deviation 0.045
Values 0.017 0.08
[87]
HepG2.C3A TNC
Mean 0.0555
Standard deviation 0.018
Values 0.043 0.068
[88]
HuH.7 TNC
Mean 0.0987
Standard deviation 0.059
Values 0.037 0.1 0.16
[89]
SNU475 TNC
Mean 95.1
Standard deviation 21
Values 1.1e+02 81
[90]
THLE TNC
Mean 62.8
Standard deviation 42
Values 33 92
[91]
liver TNC
Mean 3.65
Standard deviation 2.7
Values 6.2 5.5 0.28 2.6
[92]
ref_hepatocyte TGFB1
Mean 2.22
Standard deviation 1.8
Values 0.92 2.3 1.3 5.3 1.3
[93]
HepG2 TGFB1
Mean 54.4
Standard deviation 32
Values 32 77
[94]
HepG2.C3A TGFB1
Mean 23.6
Standard deviation 8.3
Values 18 29
[95]
HuH.7 TGFB1
Mean 3.37
Standard deviation 1.4
Values 3.7 1.8 4.5
[96]
SNU475 TGFB1
Mean 58.3
Standard deviation 7.8
Values 53 64
[97]
THLE TGFB1
Mean 38.3
Standard deviation 9.8
Values 31 45
[98]
liver TGFB1
Mean 1.34
Standard deviation 0.71
Values 2.3 1.4 1.1 0.62
[99]
ref_hepatocyte CDH16
Mean 0.552
Standard deviation 1.2
Values 0 0.033 0 2.7 0
[100]
HepG2 CDH16
Mean 2.69
Standard deviation 1.2
Values 1.9 3.5
[101]
HepG2.C3A CDH16
Mean 17.9
Standard deviation 9
Values 12 24
[102]
HuH.7 CDH16
Mean 0.0133
Standard deviation 0.0053
Values 0.019 0.013 0.0082
[103]
SNU475 CDH16
Mean 0.206
Standard deviation 0.15
Values 0.096 0.32
[104]
THLE CDH16
Mean 0.00266
Standard deviation 0.0038
Values 0 0.0053
[105]
liver CDH16
Mean 0.00588
Standard deviation 0.012
Values 0 0 0.024 0
[106]
ref_hepatocyte SNAI1
Mean 0.237
Standard deviation 0.094
Values 0.31 0.15 0.25 0.35 0.14
[107]
HepG2 SNAI1
Mean 4.39
Standard deviation 2.9
Values 2.4 6.4
[108]
HepG2.C3A SNAI1
Mean 1.22
Standard deviation 0.059
Values 1.2 1.3
[109]
HuH.7 SNAI1
Mean 4.9
Standard deviation 1
Values 4.4 4.2 6
[110]
SNU475 SNAI1
Mean 3.53
Standard deviation 0.26
Values 3.7 3.4
[111]
THLE SNAI1
Mean 2.41
Standard deviation 0.054
Values 2.4 2.4
[112]
liver SNAI1
Mean 0.697
Standard deviation 0.85
Values 0.38 0.1 0.35 2
[113]
ref_hepatocyte CDH6
Mean 0.19
Standard deviation 0.31
Values 0.74 0.0081 0.12 0 0.083
[114]
HepG2 CDH6
Mean 0.0358
Standard deviation 0.039
Values 0.0086 0.063
[115]
HepG2.C3A CDH6
Mean 0.0511
Standard deviation 0.0036
Values 0.054 0.049
[116]
HuH.7 CDH6
Mean 0.17
Standard deviation 0.044
Values 0.16 0.22 0.13
[117]
SNU475 CDH6
Mean 22.8
Standard deviation 1.7
Values 22 24
[118]
THLE CDH6
Mean 0.0689
Standard deviation 0.03
Values 0.047 0.09
[119]
liver CDH6
Mean 1.51
Standard deviation 0.46
Values 1.3 1.5 2.2 1.1
[120]
ref_hepatocyte RUNX2
Mean 0.0228
Standard deviation 0.051
Values 0 0.11 0 0 0
[121]
HepG2 RUNX2
Mean 0.0279
Standard deviation 0.033
Values 0.0043 0.052
[122]
HepG2.C3A RUNX2
Mean 0.0194
Standard deviation 0.027
Values 0 0.039
[123]
HuH.7 RUNX2
Mean 0.624
Standard deviation 0.22
Values 0.46 0.87 0.54
[124]
SNU475 RUNX2
Mean 5.82
Standard deviation 3.1
Values 8 3.6
[125]
THLE RUNX2
Mean 25.4
Standard deviation 0.45
Values 26 25
[126]
liver RUNX2
Mean 0.398
Standard deviation 0.22
Values 0.4 0.29 0.71 0.21