WP_RETT_SYNDROME_CAUSING_GENES Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 GPS2 G protein pathway suppressor 2 [1] -2.86[2] -3.64[3] -4.55[4] -3.46[5] -3.54[6] -3.70[7]
2 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 [8] -0.63[9] -0.46[10] 0.49[11] -2.14[12] -1.62[13] -3.14[14]
3 HDAC1 Histone deacetylase 1 [15] -0.32[16] -0.57[17] -0.41[18] -0.33[19] -0.45[20] -1.35[21]
4 SMARCA1 Probable global transcription activator SNF2L1 [22] -0.45[23] 0.98[24] 0.77[25] -1.86[26] -1.12[27] -0.96[28]
5 CRK Adapter molecule crk [29] -1.03[30] -1.36[31] -1.82[32] -1.22[33] -0.73[34] -0.05[35]
6 CHD4 Chromodomain-helicase-DNA-binding protein 4 [36] 1.22[37] 0.47[38] 0.01[39] 1.01[40] 0.97[41] 0.68[42]
7 EIF2B2 Translation initiation factor eIF-2B subunit beta [43] -0.92[44] -1.26[45] -2.80[46] -1.30[47] -1.22[48] -1.87[49]
8 XAB2 Pre-mRNA-splicing factor SYF1 [50] -0.77[51] -1.10[52] -0.66[53] -1.40[54] -0.83[55] -1.75[56]
9 SMARCA4 Transcription activator BRG1 [57] 1.57[58] 0.12[59] 0.71[60] 0.42[61] 0.94[62] -0.36[63]
10 NCOR1 Nuclear receptor corepressor 1 [64] 0.26[65] 0.49[66] 0.62[67] 0.59[68] 0.73[69] 1.91[70]
11 HDAC8 Histone deacetylase 8 [71] -1.80[72] -2.27[73] -2.52[74] -1.75[75] -1.42[76] -1.25[77]
12 SMARCA2 Probable global transcription activator SNF2L2 [78] -0.83[79] -0.88[80] -1.01[81] -1.06[82] -0.13[83] 0.51[84]
13 MECP2 Methyl-CpG-binding protein 2 [85] -0.10[86] -0.08[87] -0.39[88] 0.61[89] 0.81[90] -0.06[91]
14 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 [92] 0.26[93] 0.53[94] 0.65[95] 1.43[96] 1.09[97] 1.98[98]
15 SMC1A Structural maintenance of chromosomes protein 1A [99] 1.28[100] 0.87[101] 1.36[102] 2.04[103] 2.97[104] 1.55[105]
16 SYNE2 Nesprin-2 [106] -2.48[107] -0.77[108] -0.67[109] -0.41[110] -0.38[111] 2.97[112]
17 TBL1X F-box-like/WD repeat-containing protein TBL1X [113] 0.52[114] 0.65[115] 1.69[116] -5.38[117] 0.20[118] 0.86[119]
18 KDM5B Lysine-specific demethylase 5B [120] 1.84[121] 1.13[122] 0.98[123] 2.94[124] 1.88[125] 0.71[126]
19 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha [127] -7.25[128] -9.10[129] -8.78[130] -3.56[131] -7.33[132] -0.41[133]
20 NCOR2 Nuclear receptor corepressor 2 [134] 2.53[135] 0.64[136] 0.23[137] 3.17[138] 2.76[139] 1.00[140]
21 HDAC5 Histone deacetylase 5 [141] 1.86[142] 2.42[143] 1.25[144] 0.68[145] 0.16[146] 0.31[147]
22 TAF1B TATA box-binding protein-associated factor RNA polymerase I subunit B -0.40[148] 0.23[149] -0.75[150] 0.82[151] -0.69[152] -0.99[153]
23 HTT Huntingtin [154] 2.67[155] 2.43[156] 2.68[157] 2.82[158] 2.17[159] 2.94[160]
24 HIVEP2 Transcription factor HIVEP2 [161] 1.46[162] 0.99[163] 0.21[164] 2.63[165] 2.33[166] 0.98[167]
25 TRRAP Transformation/transcription domain-associated protein [168] 3.22[169] 2.49[170] 3.14[171] 3.17[172] 2.77[173] 3.34[174]
26 BRAF Serine/threonine-protein kinase B-raf [175] -0.57[176] -1.12[177] 0.40[178] -0.23[179] -0.45[180] 0.96[181]
27 SHANK3 SH3 and multiple ankyrin repeat domains protein 3 [182] 2.32[183] 1.85[184] 1.43[185] 0.07[186] -1.13[187] 2.09[188]
28 RHOBTB2 Rho-related BTB domain-containing protein 2 [189] 2.27[190] 1.54[191] -0.03[192] 1.06[193] 1.62[194] 0.56[195]
29 SATB2 DNA-binding protein SATB2 [196] 0.40[197] 1.59[198] 0.67[199] 0.12[200] 1.23[201] -0.02[202]
30 STXBP1 Syntaxin-binding protein 1 [203] 0.91[204] 1.05[205] 0.95[206] 3.22[207] 3.17[208] -0.05[209]
31 CECR2 Cat eye syndrome critical region protein 2 [210] -6.39[211] -7.34[212] 1.97[213] -4.26[214] -2.89[215] 2.00[216]
32 TCF4 Transcription factor 4 [217] -3.06[218] -2.39[219] 3.45[220] 4.35[221] 3.91[222] 4.43[223]
33 CDKL5 Cyclin-dependent kinase-like 5 [224] 0.57[225] -0.98[226] 0.17[227] -1.39[228] 0.06[229] 1.85[230]
34 SCN8A Sodium channel protein type 8 subunit alpha [231] 0.49[232] -3.73[233] 2.20[234] 3.97[235] 2.65[236] 4.21[237]
35 SYNGAP1 Ras/Rap GTPase-activating protein SynGAP [238] 2.37[239] 2.06[240] 1.60[241] 3.91[242] 4.43[243] 0.99[244]
36 MEF2C Myocyte-specific enhancer factor 2C [245] -3.93[246] -3.07[247] 1.37[248] 4.64[249] 0.71[250] 4.40[251]
37 SRRM3 Serine/arginine repetitive matrix protein 3 [252] 0.39[253] -0.31[254] 1.69[255] 1.70[256] 1.71[257] -4.82[258]
38 SCN2A Sodium channel protein type 2 subunit alpha [259] -1.20[260] 1.17[261] 0.87[262] 1.32[263] 3.61[264] 1.11[265]
39 SCN1A Sodium channel protein type 1 subunit alpha [266] 1.99[267] 9.34[268] -2.60[269] 0.59[270] -0.57[271] -0.30[272]
40 GABRD Gamma-aminobutyric acid receptor subunit delta [273] -3.37[274] -5.04[275] -6.14[276] -5.89[277] -5.76[278] -1.95[279]
41 GRIN2B Glutamate receptor ionotropic, NMDA 2B [280] -3.28[281] [282] [283] 0.11[284] -2.61[285] 0.97[286]
42 HAP1 Huntingtin-associated protein 1 [287] 3.50[288] 0.93[289] 0.92[290] 1.16[291] 3.53[292] -0.85[293]
43 KCNJ10 ATP-sensitive inward rectifier potassium channel 10 [294] 7.36[295] 0.20[296] -1.31[297] 1.46[298] 0.01[299] 3.74[300]
44 GABBR2 Gamma-aminobutyric acid type B receptor subunit 2 [301] 2.52[302] 0.25[303] 0.86[304] 1.16[305] 5.57[306] 3.55[307]
45 GRIN2A Glutamate receptor ionotropic, NMDA 2A [308] [309] [310] -2.22[311] 8.08[312] 0.70[313] 7.14[314]
46 MIR5004 [315] [316] [317] [318] [319] [320] [321]
47 FOXG1 Forkhead box protein G1 [322] [323] [324] [325] [326] [327] [328]
48 GABRA3 Gamma-aminobutyric acid receptor subunit alpha-3 [329] [330] [331] [332] [333] [334] [335]
49 ACTL6B Actin-like protein 6B [336] [337] [338] [339] [340] [341] [342]
[1]
ref_hepatocyte GPS2
Mean 53.3
Standard deviation 32
Values 49 14 33 77 93
[2]
HepG2 GPS2
Mean 28.8
Standard deviation 2.4
Values 30 27
[3]
HepG2.C3A GPS2
Mean 18
Standard deviation 4.4
Values 21 15
[4]
HuH.7 GPS2
Mean 13.2
Standard deviation 2.2
Values 15 11 14
[5]
SNU475 GPS2
Mean 17.5
Standard deviation 6.1
Values 22 13
[6]
THLE GPS2
Mean 17.4
Standard deviation 0.2
Values 18 17
[7]
liver GPS2
Mean 10.8
Standard deviation 9.1
Values 2.9 3.2 21 16
[8]
ref_hepatocyte IMPDH2
Mean 45.4
Standard deviation 20
Values 61 15 38 52 62
[9]
HepG2 IMPDH2
Mean 115
Standard deviation 9.1
Values 1.1e+02 1.2e+02
[10]
HepG2.C3A IMPDH2
Mean 139
Standard deviation 31
Values 1.2e+02 1.6e+02
[11]
HuH.7 IMPDH2
Mean 368
Standard deviation 41
Values 4.2e+02 3.4e+02 3.5e+02
[12]
SNU475 IMPDH2
Mean 37.3
Standard deviation 14
Values 47 28
[13]
THLE IMPDH2
Mean 56.1
Standard deviation 6.5
Values 51 61
[14]
liver IMPDH2
Mean 13.5
Standard deviation 5.2
Values 7.8 13 13 20
[15]
ref_hepatocyte HDAC1
Mean 20.8
Standard deviation 4.1
Values 19 18 18 22 28
[16]
HepG2 HDAC1
Mean 65.4
Standard deviation 11
Values 58 73
[17]
HepG2.C3A HDAC1
Mean 58.9
Standard deviation 2.3
Values 60 57
[18]
HuH.7 HDAC1
Mean 90.9
Standard deviation 22
Values 1.1e+02 68 94
[19]
SNU475 HDAC1
Mean 59.8
Standard deviation 8
Values 54 65
[20]
THLE HDAC1
Mean 57.8
Standard deviation 6.8
Values 53 63
[21]
liver HDAC1
Mean 21.5
Standard deviation 6.8
Values 14 18 25 29
[22]
ref_hepatocyte SMARCA1
Mean 20.2
Standard deviation 22
Values 1.8 15 7.7 58 19
[23]
HepG2 SMARCA1
Mean 57.7
Standard deviation 30
Values 79 36
[24]
HepG2.C3A SMARCA1
Mean 168
Standard deviation 17
Values 1.6e+02 1.8e+02
[25]
HuH.7 SMARCA1
Mean 199
Standard deviation 12
Values 1.9e+02 2.1e+02 2e+02
[26]
SNU475 SMARCA1
Mean 20
Standard deviation 5.3
Values 16 24
[27]
THLE SMARCA1
Mean 35.2
Standard deviation 4.6
Values 38 32
[28]
liver SMARCA1
Mean 27.4
Standard deviation 5.4
Values 25 33 30 21
[29]
ref_hepatocyte CRK
Mean 18.5
Standard deviation 12
Values 19 8.5 11 16 38
[30]
HepG2 CRK
Mean 35.5
Standard deviation 2.8
Values 38 34
[31]
HepG2.C3A CRK
Mean 30.2
Standard deviation 5.3
Values 34 27
[32]
HuH.7 CRK
Mean 30.3
Standard deviation 2.4
Values 28 32 32
[33]
SNU475 CRK
Mean 28.8
Standard deviation 1.2
Values 28 30
[34]
THLE CRK
Mean 42.5
Standard deviation 6.6
Values 38 47
[35]
liver CRK
Mean 47.1
Standard deviation 5.8
Values 47 55 41 45
[36]
ref_hepatocyte CHD4
Mean 15
Standard deviation 6.6
Values 15 7.2 10 20 23
[37]
HepG2 CHD4
Mean 136
Standard deviation 2.4
Values 1.4e+02 1.3e+02
[38]
HepG2.C3A CHD4
Mean 87.4
Standard deviation 1.3
Values 87 88
[39]
HuH.7 CHD4
Mean 87.1
Standard deviation 26
Values 87 61 1.1e+02
[40]
SNU475 CHD4
Mean 109
Standard deviation 3.4
Values 1.1e+02 1.1e+02
[41]
THLE CHD4
Mean 111
Standard deviation 24
Values 94 1.3e+02
[42]
liver CHD4
Mean 63.1
Standard deviation 23
Values 75 89 46 42
[43]
ref_hepatocyte EIF2B2
Mean 10
Standard deviation 6.4
Values 20 5.8 12 3.9 8.6
[44]
HepG2 EIF2B2
Mean 20.8
Standard deviation 0.41
Values 20 21
[45]
HepG2.C3A EIF2B2
Mean 17.6
Standard deviation 1.4
Values 19 17
[46]
HuH.7 EIF2B2
Mean 8.34
Standard deviation 1.6
Values 9.5 6.6 9
[47]
SNU475 EIF2B2
Mean 14.7
Standard deviation 1.7
Values 16 14
[48]
THLE EIF2B2
Mean 16.4
Standard deviation 0.082
Values 16 16
[49]
liver EIF2B2
Mean 7.22
Standard deviation 2.9
Values 4 6.2 7.8 11
[50]
ref_hepatocyte XAB2
Mean 9.13
Standard deviation 3.1
Values 13 10 10 4.7 7.7
[51]
HepG2 XAB2
Mean 20.9
Standard deviation 3.5
Values 18 23
[52]
HepG2.C3A XAB2
Mean 17.9
Standard deviation 4.7
Values 15 21
[53]
HuH.7 XAB2
Mean 33.3
Standard deviation 2.6
Values 34 30 35
[54]
SNU475 XAB2
Mean 12.5
Standard deviation 1.9
Values 14 11
[55]
THLE XAB2
Mean 19.5
Standard deviation 0.94
Values 19 20
[56]
liver XAB2
Mean 7.15
Standard deviation 1.4
Values 9.1 7.1 5.9 6.5
[57]
ref_hepatocyte SMARCA4
Mean 7.57
Standard deviation 3.6
Values 8 3.3 4.5 11 11
[58]
HepG2 SMARCA4
Mean 87.8
Standard deviation 16
Values 76 99
[59]
HepG2.C3A SMARCA4
Mean 34.6
Standard deviation 2
Values 33 36
[60]
HuH.7 SMARCA4
Mean 71.6
Standard deviation 30
Values 70 43 1e+02
[61]
SNU475 SMARCA4
Mean 36.4
Standard deviation 0.56
Values 36 37
[62]
THLE SMARCA4
Mean 55.3
Standard deviation 15
Values 45 66
[63]
liver SMARCA4
Mean 15.5
Standard deviation 2.3
Values 18 15 17 13
[64]
ref_hepatocyte NCOR1
Mean 7.02
Standard deviation 2.9
Values 5.5 5.1 4.3 10 10
[65]
HepG2 NCOR1
Mean 32.8
Standard deviation 11
Values 41 25
[66]
HepG2.C3A NCOR1
Mean 41.3
Standard deviation 1.3
Values 42 40
[67]
HuH.7 NCOR1
Mean 62.2
Standard deviation 16
Values 46 63 78
[68]
SNU475 NCOR1
Mean 38.2
Standard deviation 4.6
Values 35 42
[69]
THLE NCOR1
Mean 44.2
Standard deviation 1.4
Values 43 45
[70]
liver NCOR1
Mean 69.4
Standard deviation 14
Values 70 68 87 52
[71]
ref_hepatocyte HDAC8
Mean 6.58
Standard deviation 1.5
Values 5.7 5.2 5.6 7.9 8.5
[72]
HepG2 HDAC8
Mean 7.4
Standard deviation 0.71
Values 7.9 6.9
[73]
HepG2.C3A HDAC8
Mean 5.73
Standard deviation 0.42
Values 6 5.4
[74]
HuH.7 HDAC8
Mean 6.64
Standard deviation 0.89
Values 7.6 5.8 6.5
[75]
SNU475 HDAC8
Mean 7.07
Standard deviation 0.15
Values 7 7.2
[76]
THLE HDAC8
Mean 9.31
Standard deviation 0.96
Values 8.6 10
[77]
liver HDAC8
Mean 7.29
Standard deviation 1.6
Values 5.6 6.7 7.6 9.3
[78]
ref_hepatocyte SMARCA2
Mean 6.58
Standard deviation 1.9
Values 4.7 9.3 4.8 6.8 7.3
[79]
HepG2 SMARCA2
Mean 14.4
Standard deviation 2.7
Values 16 13
[80]
HepG2.C3A SMARCA2
Mean 15
Standard deviation 1.6
Values 14 16
[81]
HuH.7 SMARCA2
Mean 18.9
Standard deviation 4.6
Values 17 16 24
[82]
SNU475 SMARCA2
Mean 11.4
Standard deviation 1.5
Values 10 12
[83]
THLE SMARCA2
Mean 22.8
Standard deviation 4.3
Values 20 26
[84]
liver SMARCA2
Mean 24.7
Standard deviation 10
Values 34 32 21 12
[85]
ref_hepatocyte MECP2
Mean 4.65
Standard deviation 3.2
Values 9 3.6 6.8 0.97 2.9
[86]
HepG2 MECP2
Mean 17
Standard deviation 0.35
Values 17 17
[87]
HepG2.C3A MECP2
Mean 18.5
Standard deviation 2.1
Values 17 20
[88]
HuH.7 MECP2
Mean 20.4
Standard deviation 2.7
Values 19 19 24
[89]
SNU475 MECP2
Mean 25.6
Standard deviation 3.5
Values 23 28
[90]
THLE MECP2
Mean 30.9
Standard deviation 2.7
Values 29 33
[91]
liver MECP2
Mean 11.7
Standard deviation 2.4
Values 14 9.6 14 9.8
[92]
ref_hepatocyte TBL1XR1
Mean 4.61
Standard deviation 1.6
Values 3.3 6 3.1 4.2 6.5
[93]
HepG2 TBL1XR1
Mean 21.5
Standard deviation 5.1
Values 25 18
[94]
HepG2.C3A TBL1XR1
Mean 27.8
Standard deviation 0.088
Values 28 28
[95]
HuH.7 TBL1XR1
Mean 41.7
Standard deviation 12
Values 33 55 37
[96]
SNU475 TBL1XR1
Mean 45
Standard deviation 0.79
Values 44 46
[97]
THLE TBL1XR1
Mean 37.2
Standard deviation 0.85
Values 38 37
[98]
liver TBL1XR1
Mean 47.9
Standard deviation 6.3
Values 48 56 46 41
[99]
ref_hepatocyte SMC1A
Mean 4.41
Standard deviation 2.5
Values 3.3 2.2 2.6 6.3 7.7
[100]
HepG2 SMC1A
Mean 41.7
Standard deviation 10
Values 49 35
[101]
HepG2.C3A SMC1A
Mean 33.9
Standard deviation 11
Values 41 26
[102]
HuH.7 SMC1A
Mean 65.2
Standard deviation 32
Values 64 34 98
[103]
SNU475 SMC1A
Mean 65.4
Standard deviation 7.5
Values 71 60
[104]
THLE SMC1A
Mean 132
Standard deviation 23
Values 1.2e+02 1.5e+02
[105]
liver SMC1A
Mean 34.1
Standard deviation 5.1
Values 34 28 40 35
[106]
ref_hepatocyte SYNE2
Mean 4.36
Standard deviation 4.6
Values 1.4 6.8 11 1.5 0.74
[107]
HepG2 SYNE2
Mean 3.04
Standard deviation 1.3
Values 3.9 2.2
[108]
HepG2.C3A SYNE2
Mean 10.7
Standard deviation 1.3
Values 12 9.8
[109]
HuH.7 SYNE2
Mean 15.9
Standard deviation 5.8
Values 9.2 19 19
[110]
SNU475 SYNE2
Mean 11.8
Standard deviation 2.1
Values 10 13
[111]
THLE SYNE2
Mean 12.7
Standard deviation 5
Values 16 9.2
[112]
liver SYNE2
Mean 89.9
Standard deviation 68
Values 1.1e+02 1.8e+02 29 42
[113]
ref_hepatocyte TBL1X
Mean 4.34
Standard deviation 1.4
Values 2.8 4 3.5 6.3 5.1
[114]
HepG2 TBL1X
Mean 24.3
Standard deviation 2.7
Values 26 22
[115]
HepG2.C3A TBL1X
Mean 28.6
Standard deviation 4.5
Values 25 32
[116]
HuH.7 TBL1X
Mean 80.9
Standard deviation 15
Values 63 92 88
[117]
SNU475 TBL1X
Mean 0.377
Standard deviation 0.13
Values 0.47 0.28
[118]
THLE TBL1X
Mean 19
Standard deviation 0.42
Values 19 19
[119]
liver TBL1X
Mean 20.7
Standard deviation 8.5
Values 13 18 33 19
[120]
ref_hepatocyte KDM5B
Mean 2.77
Standard deviation 1.4
Values 2.8 1.4 1.3 4.6 3.7
[121]
HepG2 KDM5B
Mean 38.8
Standard deviation 2.4
Values 40 37
[122]
HepG2.C3A KDM5B
Mean 25.5
Standard deviation 7.6
Values 20 31
[123]
HuH.7 KDM5B
Mean 31.6
Standard deviation 8.6
Values 23 40 32
[124]
SNU475 KDM5B
Mean 76.6
Standard deviation 13
Values 67 86
[125]
THLE KDM5B
Mean 38.7
Standard deviation 5.5
Values 35 43
[126]
liver KDM5B
Mean 12
Standard deviation 2.3
Values 12 15 12 9.2
[127]
ref_hepatocyte GNAO1
Mean 2.68
Standard deviation 3
Values 1.5 6.9 4.6 0 0.37
[128]
HepG2 GNAO1
Mean 0.0687
Standard deviation 0.024
Values 0.051 0.086
[129]
HepG2.C3A GNAO1
Mean 0.0204
Standard deviation 0.0014
Values 0.021 0.019
[130]
HuH.7 GNAO1
Mean 0.0351
Standard deviation 0.024
Values 0.0094 0.039 0.057
[131]
SNU475 GNAO1
Mean 0.821
Standard deviation 0.00018
Values 0.82 0.82
[132]
THLE GNAO1
Mean 0.063
Standard deviation 0.036
Values 0.089 0.037
[133]
liver GNAO1
Mean 5.32
Standard deviation 1.4
Values 6.3 6.7 4.4 3.9
[134]
ref_hepatocyte NCOR2
Mean 2.59
Standard deviation 0.92
Values 4.1 1.7 2.4 2.5 2.2
[135]
HepG2 NCOR2
Mean 58.1
Standard deviation 18
Values 46 71
[136]
HepG2.C3A NCOR2
Mean 17
Standard deviation 4.1
Values 14 20
[137]
HuH.7 NCOR2
Mean 17.5
Standard deviation 6.7
Values 13 14 25
[138]
SNU475 NCOR2
Mean 84.3
Standard deviation 15
Values 73 95
[139]
THLE NCOR2
Mean 66.6
Standard deviation 7.4
Values 61 72
[140]
liver NCOR2
Mean 13.6
Standard deviation 4.9
Values 20 14 11 8.8
[141]
ref_hepatocyte HDAC5
Mean 2.45
Standard deviation 0.87
Values 3 3.2 2.2 2.8 1.1
[142]
HepG2 HDAC5
Mean 34.7
Standard deviation 8.4
Values 29 41
[143]
HepG2.C3A HDAC5
Mean 55.1
Standard deviation 31
Values 33 77
[144]
HuH.7 HDAC5
Mean 33.8
Standard deviation 12
Values 25 48 28
[145]
SNU475 HDAC5
Mean 14.1
Standard deviation 1.6
Values 13 15
[146]
THLE HDAC5
Mean 10.4
Standard deviation 0.35
Values 10 11
[147]
liver HDAC5
Mean 7.98
Standard deviation 1.2
Values 9.1 8.5 7.9 6.4
[148]
ref_hepatocyte TAF1B
Mean 2.29
Standard deviation 1.4
Values 2.3 0.49 1.4 4 3.3
[149]
HepG2 TAF1B
Mean 6.79
Standard deviation 1.8
Values 8 5.5
[150]
HepG2.C3A TAF1B
Mean 11.3
Standard deviation 3.9
Values 14 8.5
[151]
HuH.7 TAF1B
Mean 7.89
Standard deviation 1.7
Values 8.8 5.9 9
[152]
SNU475 TAF1B
Mean 14.6
Standard deviation 0.96
Values 14 15
[153]
THLE TAF1B
Mean 5.4
Standard deviation 0.19
Values 5.3 5.5
[154]
liver TAF1B
Mean 3.05
Standard deviation 0.8
Values 2.2 3 2.9 4.1
[155]
ref_hepatocyte HTT
Mean 2.27
Standard deviation 0.72
Values 2.1 1.8 1.6 3.5 2.3
[156]
HepG2 HTT
Mean 56.3
Standard deviation 7.8
Values 62 51
[157]
HepG2.C3A HTT
Mean 51.5
Standard deviation 0.11
Values 52 51
[158]
HuH.7 HTT
Mean 83.9
Standard deviation 22
Values 68 74 1.1e+02
[159]
SNU475 HTT
Mean 57.8
Standard deviation 12
Values 49 66
[160]
THLE HTT
Mean 38.8
Standard deviation 6.7
Values 34 44
[161]
liver HTT
Mean 45.8
Standard deviation 18
Values 62 62 31 28
[162]
ref_hepatocyte HIVEP2
Mean 1.36
Standard deviation 1.5
Values 3.8 0.52 0.3 0.47 1.7
[163]
HepG2 HIVEP2
Mean 14.6
Standard deviation 0.17
Values 15 14
[164]
HepG2.C3A HIVEP2
Mean 11.3
Standard deviation 5
Values 7.8 15
[165]
HuH.7 HIVEP2
Mean 9.05
Standard deviation 5.9
Values 4.3 16 7.2
[166]
SNU475 HIVEP2
Mean 30.3
Standard deviation 4.1
Values 27 33
[167]
THLE HIVEP2
Mean 26
Standard deviation 1.5
Values 25 27
[168]
liver HIVEP2
Mean 7.04
Standard deviation 4.9
Values 13 8.5 3.3 3.1
[169]
ref_hepatocyte TRRAP
Mean 1.1
Standard deviation 0.22
Values 0.8 1.2 1.2 1.4 0.98
[170]
HepG2 TRRAP
Mean 40.2
Standard deviation 6
Values 44 36
[171]
HepG2.C3A TRRAP
Mean 26
Standard deviation 0.77
Values 27 25
[172]
HuH.7 TRRAP
Mean 56.3
Standard deviation 19
Values 39 54 76
[173]
SNU475 TRRAP
Mean 35.9
Standard deviation 5.2
Values 32 40
[174]
THLE TRRAP
Mean 28.5
Standard deviation 8
Values 23 34
[175]
liver TRRAP
Mean 29.4
Standard deviation 20
Values 46 48 13 11
[176]
ref_hepatocyte BRAF
Mean 1.07
Standard deviation 0.72
Values 2.3 0.67 0.67 0.56 1.2
[177]
HepG2 BRAF
Mean 2.8
Standard deviation 0.62
Values 3.2 2.4
[178]
HepG2.C3A BRAF
Mean 2.07
Standard deviation 0.66
Values 2.5 1.6
[179]
HuH.7 BRAF
Mean 8.12
Standard deviation 5.8
Values 3.4 15 6.4
[180]
SNU475 BRAF
Mean 3.28
Standard deviation 0.16
Values 3.4 3.2
[181]
THLE BRAF
Mean 2.97
Standard deviation 0.38
Values 2.7 3.2
[182]
liver BRAF
Mean 5.48
Standard deviation 2.9
Values 7.9 8 3.1 2.9
[183]
ref_hepatocyte SHANK3
Mean 0.765
Standard deviation 0.34
Values 1 0.76 1.1 0.76 0.22
[184]
HepG2 SHANK3
Mean 14.9
Standard deviation 2.9
Values 13 17
[185]
HepG2.C3A SHANK3
Mean 11.6
Standard deviation 4
Values 8.7 14
[186]
HuH.7 SHANK3
Mean 11.9
Standard deviation 4.2
Values 8.5 17 11
[187]
SNU475 SHANK3
Mean 2.89
Standard deviation 0.8
Values 2.3 3.5
[188]
THLE SHANK3
Mean 1.33
Standard deviation 0.27
Values 1.5 1.1
[189]
liver SHANK3
Mean 8.57
Standard deviation 6.4
Values 16 12 4.1 2.6
[190]
ref_hepatocyte RHOBTB2
Mean 0.713
Standard deviation 0.23
Values 0.61 0.5 0.93 0.99 0.53
[191]
HepG2 RHOBTB2
Mean 13.5
Standard deviation 0.24
Values 14 13
[192]
HepG2.C3A RHOBTB2
Mean 8.7
Standard deviation 0.4
Values 9 8.4
[193]
HuH.7 RHOBTB2
Mean 4.04
Standard deviation 0.33
Values 3.7 4.3 4.2
[194]
SNU475 RHOBTB2
Mean 5.35
Standard deviation 0.74
Values 5.9 4.8
[195]
THLE RHOBTB2
Mean 8.33
Standard deviation 0.36
Values 8.1 8.6
[196]
liver RHOBTB2
Mean 2.77
Standard deviation 0.97
Values 3.8 2.7 3.1 1.5
[197]
ref_hepatocyte SATB2
Mean 0.689
Standard deviation 0.41
Values 1.1 0.12 0.51 1 0.64
[198]
HepG2 SATB2
Mean 3.54
Standard deviation 0.76
Values 4.1 3
[199]
HepG2.C3A SATB2
Mean 8.73
Standard deviation 0.44
Values 8.4 9
[200]
HuH.7 SATB2
Mean 6.33
Standard deviation 1.5
Values 4.6 6.9 7.5
[201]
SNU475 SATB2
Mean 2.7
Standard deviation 0.11
Values 2.8 2.6
[202]
THLE SATB2
Mean 6.13
Standard deviation 0.47
Values 6.5 5.8
[203]
liver SATB2
Mean 1.78
Standard deviation 0.41
Values 1.4 2.2 2 1.5
[204]
ref_hepatocyte STXBP1
Mean 0.658
Standard deviation 0.63
Values 0.69 0.065 0.22 1.7 0.64
[205]
HepG2 STXBP1
Mean 4.83
Standard deviation 0.73
Values 4.3 5.4
[206]
HepG2.C3A STXBP1
Mean 5.71
Standard deviation 0.79
Values 5.1 6.3
[207]
HuH.7 STXBP1
Mean 7.36
Standard deviation 1.4
Values 6.7 6.5 8.9
[208]
SNU475 STXBP1
Mean 22.1
Standard deviation 0.72
Values 22 23
[209]
THLE STXBP1
Mean 22.4
Standard deviation 6
Values 18 27
[210]
liver STXBP1
Mean 1.67
Standard deviation 0.8
Values 0.91 1.1 2 2.6
[211]
ref_hepatocyte CECR2
Mean 0.601
Standard deviation 0.42
Values 1 0.62 0.41 0 0.97
[212]
HepG2 CECR2
Mean 0.0279
Standard deviation 0.015
Values 0.039 0.017
[213]
HepG2.C3A CECR2
Mean 0.0156
Standard deviation 0.0083
Values 0.021 0.0097
[214]
HuH.7 CECR2
Mean 13.6
Standard deviation 5.8
Values 6.9 17 17
[215]
SNU475 CECR2
Mean 0.113
Standard deviation 0.13
Values 0.21 0.019
[216]
THLE CECR2
Mean 0.309
Standard deviation 0.06
Values 0.27 0.35
[217]
liver CECR2
Mean 6.32
Standard deviation 5
Values 11 10 2.2 1.7
[218]
ref_hepatocyte TCF4
Mean 0.191
Standard deviation 0.17
Values 0.41 0.3 0.16 0 0.085
[219]
HepG2 TCF4
Mean 0.0894
Standard deviation 0.086
Values 0.15 0.029
[220]
HepG2.C3A TCF4
Mean 0.153
Standard deviation 0.0038
Values 0.15 0.16
[221]
HuH.7 TCF4
Mean 12.1
Standard deviation 4
Values 7.8 16 13
[222]
SNU475 TCF4
Mean 14.1
Standard deviation 2.2
Values 13 16
[223]
THLE TCF4
Mean 10.9
Standard deviation 0.72
Values 10 11
[224]
liver TCF4
Mean 10.8
Standard deviation 2.4
Values 9.7 14 9.7 9.6
[225]
ref_hepatocyte CDKL5
Mean 0.181
Standard deviation 0.25
Values 0.17 0.089 0 0.61 0.034
[226]
HepG2 CDKL5
Mean 1.05
Standard deviation 0.76
Values 1.6 0.51
[227]
HepG2.C3A CDKL5
Mean 0.385
Standard deviation 0.21
Values 0.54 0.23
[228]
HuH.7 CDKL5
Mean 1.18
Standard deviation 0.7
Values 0.4 1.4 1.8
[229]
SNU475 CDKL5
Mean 0.248
Standard deviation 0.12
Values 0.33 0.16
[230]
THLE CDKL5
Mean 0.713
Standard deviation 0.26
Values 0.53 0.89
[231]
liver CDKL5
Mean 1.72
Standard deviation 0.46
Values 2.1 2 1.8 1.1
[232]
ref_hepatocyte SCN8A
Mean 0.161
Standard deviation 0.13
Values 0.052 0.24 0.2 0 0.31
[233]
HepG2 SCN8A
Mean 0.887
Standard deviation 0.14
Values 0.98 0.79
[234]
HepG2.C3A SCN8A
Mean 0.0511
Standard deviation 0.0036
Values 0.054 0.049
[235]
HuH.7 SCN8A
Mean 4.28
Standard deviation 1.3
Values 2.8 5.4 4.7
[236]
SNU475 SCN8A
Mean 9.15
Standard deviation 0.16
Values 9 9.3
[237]
THLE SCN8A
Mean 3.85
Standard deviation 1.8
Values 5.1 2.6
[238]
liver SCN8A
Mean 7.88
Standard deviation 3.9
Values 11 11 6.1 3.2
[239]
ref_hepatocyte SYNGAP1
Mean 0.133
Standard deviation 0.074
Values 0.16 0.15 0.22 0.12 0.018
[240]
HepG2 SYNGAP1
Mean 2.69
Standard deviation 0.51
Values 2.3 3
[241]
HepG2.C3A SYNGAP1
Mean 2.34
Standard deviation 0.047
Values 2.3 2.4
[242]
HuH.7 SYNGAP1
Mean 2.33
Standard deviation 0.42
Values 2.1 2.8 2.1
[243]
SNU475 SYNGAP1
Mean 7.21
Standard deviation 0.98
Values 6.5 7.9
[244]
THLE SYNGAP1
Mean 10.9
Standard deviation 3.2
Values 13 8.6
[245]
liver SYNGAP1
Mean 0.695
Standard deviation 0.34
Values 1 0.97 0.47 0.33
[246]
ref_hepatocyte MEF2C
Mean 0.12
Standard deviation 0.15
Values 0.19 0.34 0.069 0 0
[247]
HepG2 MEF2C
Mean 0.0308
Standard deviation 0.011
Values 0.039 0.023
[248]
HepG2.C3A MEF2C
Mean 0.0598
Standard deviation 0.039
Values 0.032 0.087
[249]
HuH.7 MEF2C
Mean 1.79
Standard deviation 0.19
Values 1.6 1.8 2
[250]
SNU475 MEF2C
Mean 10.8
Standard deviation 1
Values 12 10
[251]
THLE MEF2C
Mean 0.747
Standard deviation 0.16
Values 0.63 0.86
[252]
liver MEF2C
Mean 6.67
Standard deviation 1.2
Values 5.4 8 7.3 6
[253]
ref_hepatocyte SRRM3
Mean 0.109
Standard deviation 0.095
Values 0.19 0.089 0.043 0 0.23
[254]
HepG2 SRRM3
Mean 0.557
Standard deviation 0.41
Values 0.27 0.85
[255]
HepG2.C3A SRRM3
Mean 0.369
Standard deviation 0.097
Values 0.3 0.44
[256]
HuH.7 SRRM3
Mean 2.03
Standard deviation 0.062
Values 2 2 2.1
[257]
SNU475 SRRM3
Mean 1.28
Standard deviation 0.22
Values 1.4 1.1
[258]
THLE SRRM3
Mean 1.36
Standard deviation 0.27
Values 1.2 1.5
[259]
liver SRRM3
Mean 0.0102
Standard deviation 0.013
Values 0.026 0.014 0 0
[260]
ref_hepatocyte SCN2A
Mean 0.0658
Standard deviation 0.12
Values 0 0.033 0 0.27 0.026
[261]
HepG2 SCN2A
Mean 0.112
Standard deviation 0.061
Values 0.15 0.069
[262]
HepG2.C3A SCN2A
Mean 0.62
Standard deviation 0.63
Values 0.17 1.1
[263]
HuH.7 SCN2A
Mean 0.695
Standard deviation 0.2
Values 0.5 0.9 0.69
[264]
SNU475 SCN2A
Mean 0.592
Standard deviation 0.044
Values 0.62 0.56
[265]
THLE SCN2A
Mean 3.06
Standard deviation 0.13
Values 3 3.1
[266]
liver SCN2A
Mean 0.374
Standard deviation 0.19
Values 0.6 0.44 0.31 0.15
[267]
ref_hepatocyte SCN1A
Mean 0.0454
Standard deviation 0.069
Values 0.038 0.024 0 0.16 0
[268]
HepG2 SCN1A
Mean 0.707
Standard deviation 0.38
Values 0.98 0.44
[269]
HepG2.C3A SCN1A
Mean 123
Standard deviation 19
Values 1.1e+02 1.4e+02
[270]
HuH.7 SCN1A
Mean 0.0433
Standard deviation 0.0072
Values 0.037 0.051 0.041
[271]
SNU475 SCN1A
Mean 0.246
Standard deviation 0.13
Values 0.34 0.15
[272]
THLE SCN1A
Mean 0.116
Standard deviation 0.036
Values 0.14 0.09
[273]
liver SCN1A
Mean 0.0974
Standard deviation 0.084
Values 0.12 0.2 0.071 0
[274]
ref_hepatocyte GABRD
Mean 0.038
Standard deviation 0.085
Values 0.19 0 0 0 0
[275]
HepG2 GABRD
Mean 0.0143
Standard deviation 0.02
Values 0 0.029
[276]
HepG2.C3A GABRD
Mean 0.00486
Standard deviation 0.0069
Values 0 0.0097
[277]
HuH.7 GABRD
Mean 0.00312
Standard deviation 0.0054
Values 0.0094 0 0
[278]
SNU475 GABRD
Mean 0.00232
Standard deviation 0.0033
Values 0 0.0046
[279]
THLE GABRD
Mean 0.00266
Standard deviation 0.0038
Values 0 0.0053
[280]
liver GABRD
Mean 0.0259
Standard deviation 0.021
Values 0 0.029 0.024 0.051
[281]
ref_hepatocyte GRIN2B
Mean 0.0213
Standard deviation 0.039
Values 0 0.089 0.017 0 0
[282]
HepG2 GRIN2B
Mean 0.00858
Standard deviation 0.012
Values 0.017 0
[283]
HepG2.C3A GRIN2B
Mean 0
Standard deviation 0
Values 0 0
[284]
HuH.7 GRIN2B
Mean 0
Standard deviation 0
Values 0 0 0
[285]
SNU475 GRIN2B
Mean 0.0833
Standard deviation 0.046
Values 0.051 0.12
[286]
THLE GRIN2B
Mean 0.0133
Standard deviation 0.019
Values 0 0.027
[287]
liver GRIN2B
Mean 0.11
Standard deviation 0.05
Values 0.17 0.1 0.12 0.051
[288]
ref_hepatocyte HAP1
Mean 0.0211
Standard deviation 0.02
Values 0.038 0.024 0.043 0 0
[289]
HepG2 HAP1
Mean 0.934
Standard deviation 0.93
Values 0.27 1.6
[290]
HepG2.C3A HAP1
Mean 0.169
Standard deviation 0.12
Values 0.086 0.25
[291]
HuH.7 HAP1
Mean 0.23
Standard deviation 0.047
Values 0.22 0.19 0.28
[292]
SNU475 HAP1
Mean 0.17
Standard deviation 0.17
Values 0.29 0.051
[293]
THLE HAP1
Mean 0.929
Standard deviation 0.12
Values 1 0.85
[294]
liver HAP1
Mean 0.0309
Standard deviation 0.027
Values 0.013 0.014 0.071 0.026
[295]
ref_hepatocyte KCNJ10
Mean 0.0171
Standard deviation 0.034
Values 0 0.0081 0.078 0 0
[296]
HepG2 KCNJ10
Mean 11
Standard deviation 7.5
Values 16 5.7
[297]
HepG2.C3A KCNJ10
Mean 0.0828
Standard deviation 0.035
Values 0.11 0.058
[298]
HuH.7 KCNJ10
Mean 0.04
Standard deviation 0.017
Values 0.037 0.058 0.025
[299]
SNU475 KCNJ10
Mean 0.171
Standard deviation 0.038
Values 0.2 0.14
[300]
THLE KCNJ10
Mean 0.0657
Standard deviation 0.033
Values 0.089 0.043
[301]
liver KCNJ10
Mean 0.605
Standard deviation 0.19
Values 0.66 0.81 0.35 0.59
[302]
ref_hepatocyte GABBR2
Mean 0.00488
Standard deviation 0.011
Values 0 0.024 0 0 0
[303]
HepG2 GABBR2
Mean 0.11
Standard deviation 0.088
Values 0.047 0.17
[304]
HepG2.C3A GABBR2
Mean 0.0243
Standard deviation 0.034
Values 0 0.049
[305]
HuH.7 GABBR2
Mean 0.0511
Standard deviation 0.034
Values 0.075 0.013 0.066
[306]
SNU475 GABBR2
Mean 0.0395
Standard deviation 0.023
Values 0.056 0.023
[307]
THLE GABBR2
Mean 0.879
Standard deviation 0.31
Values 0.66 1.1
[308]
liver GABBR2
Mean 0.15
Standard deviation 0.064
Values 0.24 0.11 0.094 0.15
[309]
ref_hepatocyte GRIN2A
Mean 0.00172
Standard deviation 0.0039
Values 0 0 0.0086 0 0
[310]
HepG2 GRIN2A
Mean 0
Standard deviation 0
Values 0 0
[311]
HepG2.C3A GRIN2A
Mean 0
Standard deviation 0
Values 0 0
[312]
HuH.7 GRIN2A
Mean 0.00214
Standard deviation 0.0037
Values 0 0.0064 0
[313]
SNU475 GRIN2A
Mean 1.69
Standard deviation 0.46
Values 2 1.4
[314]
THLE GRIN2A
Mean 0.0106
Standard deviation 0.015
Values 0 0.021
[315]
liver GRIN2A
Mean 0.641
Standard deviation 0.48
Values 1.3 0.74 0.28 0.26
[316]
ref_hepatocyte MIR5004
Missing
[317]
HepG2 MIR5004
Mean 0
Standard deviation 0
Values 0 0
[318]
HepG2.C3A MIR5004
Mean 0
Standard deviation 0
Values 0 0
[319]
HuH.7 MIR5004
Mean 0.00214
Standard deviation 0.0037
Values 0 0.0064 0
[320]
SNU475 MIR5004
Mean 0
Standard deviation 0
Values 0 0
[321]
THLE MIR5004
Mean 0.00266
Standard deviation 0.0038
Values 0 0.0053
[322]
liver MIR5004
Mean 0
Standard deviation 0
Values 0 0 0 0
[323]
ref_hepatocyte FOXG1
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[324]
HepG2 FOXG1
Mean 0.0122
Standard deviation 0.001
Values 0.013 0.011
[325]
HepG2.C3A FOXG1
Mean 0.00536
Standard deviation 0.0076
Values 0.011 0
[326]
HuH.7 FOXG1
Mean 5.07
Standard deviation 0.98
Values 6.2 4.7 4.4
[327]
SNU475 FOXG1
Mean 18.8
Standard deviation 1.9
Values 17 20
[328]
THLE FOXG1
Mean 0.0228
Standard deviation 0.0096
Values 0.03 0.016
[329]
liver FOXG1
Mean 0
Standard deviation 0
Values 0 0 0 0
[330]
ref_hepatocyte GABRA3
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[331]
HepG2 GABRA3
Mean 0.0308
Standard deviation 0.011
Values 0.039 0.023
[332]
HepG2.C3A GABRA3
Mean 0
Standard deviation 0
Values 0 0
[333]
HuH.7 GABRA3
Mean 0.00761
Standard deviation 0.0083
Values 0 0.0064 0.016
[334]
SNU475 GABRA3
Mean 3.04
Standard deviation 0.91
Values 2.4 3.7
[335]
THLE GABRA3
Mean 0.0213
Standard deviation 0.03
Values 0 0.043
[336]
liver GABRA3
Mean 0.00331
Standard deviation 0.0066
Values 0.013 0 0 0
[337]
ref_hepatocyte ACTL6B
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[338]
HepG2 ACTL6B
Mean 0.00501
Standard deviation 0.001
Values 0.0043 0.0057
[339]
HepG2.C3A ACTL6B
Mean 0
Standard deviation 0
Values 0 0
[340]
HuH.7 ACTL6B
Mean 0.00701
Standard deviation 0.0065
Values 0 0.013 0.0082
[341]
SNU475 ACTL6B
Mean 0
Standard deviation 0
Values 0 0
[342]
THLE ACTL6B
Mean 0.00532
Standard deviation 0.0075
Values 0 0.011
[343]
liver ACTL6B
Mean 0.00642
Standard deviation 0.013
Values 0 0 0 0.026