WP_NUCLEOTIDE_EXCISION_REPAIR_IN_XERODERMA_PIGMENTOSUM | Return to index | ||||||||
Order | Gene | Description | ref_hepatocyte | HepG2 | HepG2.C3A | HuH.7 | SNU475 | THLE | liver |
1 | HMGN1 | Non-histone chromosomal protein HMG-14 | [1] | -2.35[2] | -2.41[3] | -2.78[4] | -2.47[5] | -2.41[6] | -3.07[7] |
2 | RBX1 | E3 ubiquitin-protein ligase RBX1 | [8] | -1.75[9] | -1.42[10] | -1.76[11] | -2.38[12] | -2.04[13] | -1.19[14] |
3 | CETN2 | Centrin-2 | [15] | -2.30[16] | -2.02[17] | -3.42[18] | -2.34[19] | -2.85[20] | -2.58[21] |
4 | PARP1 | Poly [ADP-ribose] polymerase 1 | [22] | 0.44[23] | 0.09[24] | 0.60[25] | 0.85[26] | 0.28[27] | 0.50[28] |
5 | PCNA | Proliferating cell nuclear antigen | [29] | 1.20[30] | 1.08[31] | -0.56[32] | 0.11[33] | 0.30[34] | -2.16[35] |
6 | RAD23B | UV excision repair protein RAD23 homolog B | [36] | 0.92[37] | 0.67[38] | 0.74[39] | 0.89[40] | 1.31[41] | 0.94[42] |
7 | POLD2 | DNA polymerase delta subunit 2 | [43] | -0.29[44] | -0.22[45] | 0.06[46] | -0.54[47] | -0.26[48] | 0.79[49] |
8 | POLD4 | DNA polymerase delta subunit 4 | [50] | -1.82[51] | -2.27[52] | -0.42[53] | 1.77[54] | -1.91[55] | 0.44[56] |
9 | RAD23A | UV excision repair protein RAD23 homolog A | [57] | -0.10[58] | -0.28[59] | 0.56[60] | -0.61[61] | 0.25[62] | 0.48[63] |
10 | DDB1 | DNA damage-binding protein 1 | [64] | 1.92[65] | 1.18[66] | 2.09[67] | 1.17[68] | 1.11[69] | 1.51[70] |
11 | POLE3 | DNA polymerase epsilon subunit 3 | [71] | -0.48[72] | -0.72[73] | -0.65[74] | -0.73[75] | 0.22[76] | -0.66[77] |
12 | POLE4 | DNA polymerase epsilon subunit 4 | [78] | -0.74[79] | -0.10[80] | -3.78[81] | -1.30[82] | -1.86[83] | -0.89[84] |
13 | RPA2 | Replication protein A 32 kDa subunit | [85] | -1.15[86] | -1.18[87] | -0.84[88] | -0.42[89] | -0.43[90] | -1.49[91] |
14 | GPS1 | COP9 signalosome complex subunit 1 | [92] | 0.89[93] | 0.80[94] | -0.19[95] | 0.14[96] | -0.03[97] | 0.73[98] |
15 | CUL4A | Cullin-4A | [99] | 0.54[100] | 0.72[101] | -0.20[102] | 0.26[103] | -0.02[104] | 1.49[105] |
16 | CCNH | Cyclin-H | [106] | -1.36[107] | -0.61[108] | -1.44[109] | -1.45[110] | -0.15[111] | -0.01[112] |
17 | ERCC3 | TFIIH basal transcription factor complex helicase XPB subunit | [113] | 0.19[114] | 0.34[115] | -0.47[116] | -0.12[117] | 0.24[118] | 0.21[119] |
18 | USP7 | Ubiquitin carboxyl-terminal hydrolase 7 | [120] | 1.87[121] | 1.57[122] | 0.72[123] | 0.42[124] | 0.71[125] | 1.45[126] |
19 | ERCC1 | DNA excision repair protein ERCC-1 | [127] | -0.18[128] | -0.43[129] | -0.49[130] | -0.33[131] | 0.00[132] | -0.15[133] |
20 | CDK7 | Cyclin-dependent kinase 7 | [134] | -0.34[135] | 0.57[136] | 0.07[137] | -0.24[138] | -0.65[139] | -1.44[140] |
21 | CHD1L | Chromodomain-helicase-DNA-binding protein 1-like | [141] | 1.40[142] | 1.38[143] | 0.80[144] | 1.30[145] | -0.15[146] | 0.98[147] |
22 | RFC4 | Replication factor C subunit 4 | [148] | -0.66[149] | -0.14[150] | 0.22[151] | -0.64[152] | 0.60[153] | -1.84[154] |
23 | GTF2H2 | General transcription factor IIH subunit 2 | [155] | -5.09[156] | -4.25[157] | -4.69[158] | -4.86[159] | -6.19[160] | -3.76[161] |
24 | RFC1 | Replication factor C subunit 1 | [162] | 0.45[163] | 1.63[164] | 1.79[165] | 0.65[166] | 1.40[167] | 1.69[168] |
25 | XAB2 | Pre-mRNA-splicing factor SYF1 | [169] | 0.36[170] | 0.20[171] | 0.93[172] | -0.10[173] | 0.29[174] | 0.05[175] |
26 | RFC2 | Replication factor C subunit 2 | [176] | 0.04[177] | -0.20[178] | -0.38[179] | 0.50[180] | 0.88[181] | 0.14[182] |
27 | RPA1 | Replication protein A 70 kDa DNA-binding subunit | [183] | 1.62[184] | 1.25[185] | 1.30[186] | 2.18[187] | 2.11[188] | 0.92[189] |
28 | RPA3 | Replication protein A 14 kDa subunit | [190] | -0.06[191] | 0.64[192] | 1.13[193] | -0.58[194] | -0.38[195] | 0.22[196] |
29 | GTF2H1 | General transcription factor IIH subunit 1 | [197] | 0.53[198] | 0.61[199] | 0.33[200] | 0.92[201] | 0.39[202] | 1.08[203] |
30 | GTF2H4 | General transcription factor IIH subunit 4 | [204] | 0.06[205] | 0.43[206] | 0.29[207] | 0.64[208] | -0.22[209] | -0.75[210] |
31 | XPA | DNA repair protein complementing XP-A cells | [211] | -2.03[212] | -1.25[213] | -1.81[214] | -1.60[215] | -1.52[216] | 0.23[217] |
32 | CUL4B | Cullin-4B | [218] | 0.21[219] | 1.50[220] | 2.75[221] | 2.64[222] | 3.49[223] | 1.79[224] |
33 | DDB2 | DNA damage-binding protein 2 | [225] | 1.39[226] | 0.81[227] | -0.73[228] | -1.28[229] | -0.79[230] | -0.61[231] |
34 | RFC5 | Replication factor C subunit 5 | [232] | 0.44[233] | 0.80[234] | 0.77[235] | 0.59[236] | 1.03[237] | 0.04[238] |
35 | MNAT1 | CDK-activating kinase assembly factor MAT1 | [239] | -0.31[240] | 0.89[241] | -0.15[242] | 0.71[243] | 0.16[244] | -0.04[245] |
36 | XPC | DNA repair protein complementing XP-C cells | [246] | 1.22[247] | 0.88[248] | 1.54[249] | 0.77[250] | 0.93[251] | 2.16[252] |
37 | GTF2H3 | General transcription factor IIH subunit 3 | [253] | 1.51[254] | 1.83[255] | 1.57[256] | 1.68[257] | 1.37[258] | 1.04[259] |
38 | ERCC2 | TFIIH basal transcription factor complex helicase XPD subunit | [260] | 1.43[261] | 1.38[262] | 1.59[263] | 1.64[264] | 1.47[265] | 0.08[266] |
39 | GTF2H2C | General transcription factor IIH subunit 2-like protein | [267] | -6.36[268] | -5.66[269] | -5.10[270] | -5.59[271] | -6.67[272] | -5.42[273] |
40 | XRCC1 | DNA repair protein XRCC1 | [274] | 0.94[275] | 1.03[276] | 1.88[277] | 1.09[278] | 0.99[279] | -0.01[280] |
41 | RFC3 | Replication factor C subunit 3 | [281] | 1.48[282] | 2.24[283] | 2.16[284] | 1.58[285] | 2.09[286] | 0.04[287] |
42 | LIG3 | DNA ligase 3 | [288] | 1.48[289] | 1.42[290] | 2.28[291] | 1.40[292] | 0.37[293] | 1.78[294] |
43 | LIG1 | DNA ligase 1 | [295] | 1.94[296] | 1.86[297] | 2.27[298] | 0.83[299] | 1.49[300] | 0.54[301] |
44 | GTF2H5 | General transcription factor IIH subunit 5 | [302] | 1.90[303] | 2.20[304] | 1.80[305] | 1.60[306] | 1.68[307] | 1.94[308] |
45 | POLD1 | DNA polymerase delta catalytic subunit | [309] | 2.16[310] | 2.29[311] | 2.88[312] | 2.15[313] | 2.82[314] | 1.58[315] |
46 | POLK | DNA polymerase kappa | [316] | -0.54[317] | 0.84[318] | 0.87[319] | 2.16[320] | 1.80[321] | 3.01[322] |
47 | POLH | DNA polymerase eta | [323] | 2.42[324] | 1.81[325] | 0.15[326] | 2.32[327] | 2.03[328] | 2.25[329] |
48 | ERCC8 | DNA excision repair protein ERCC-8 | [330] | 1.09[331] | 2.11[332] | 1.03[333] | -0.09[334] | 1.13[335] | 0.97[336] |
49 | BRCA1 | Breast cancer type 1 susceptibility protein | [337] | 1.98[338] | 3.12[339] | 3.29[340] | 2.47[341] | 2.91[342] | 2.59[343] |
50 | POLD3 | DNA polymerase delta subunit 3 | [344] | 1.48[345] | 1.25[346] | 2.00[347] | 2.44[348] | 2.84[349] | 1.90[350] |
51 | POLE | DNA polymerase epsilon catalytic subunit A | [351] | 3.35[352] | 3.87[353] | 3.70[354] | 3.06[355] | 3.99[356] | 3.85[357] |
52 | POLE2 | DNA polymerase epsilon subunit 2 | [358] | 1.01[359] | 1.71[360] | 2.47[361] | 1.48[362] | 1.93[363] | -0.24[364] |
53 | RAD18 | E3 ubiquitin-protein ligase RAD18 | [365] | 1.46[366] | 2.55[367] | 3.51[368] | 2.69[369] | 3.17[370] | 1.92[371] |
54 | ERCC4 | DNA repair endonuclease XPF | [372] | 2.52[373] | 2.10[374] | 2.04[375] | 2.55[376] | 2.61[377] | 3.33[378] |
55 | ERCC6 | DNA excision repair protein ERCC-6 | [379] | 1.60[380] | 2.27[381] | 0.19[382] | 3.64[383] | 2.63[384] | 4.14[385] |
56 | SLX4 | Structure-specific endonuclease subunit SLX4 | [386] | 3.22[387] | 3.29[388] | 3.62[389] | 3.42[390] | 3.56[391] | 3.18[392] |
57 | H4C11 | [393] | [394] | [395] | [396] | [397] | [398] | [399] | |
58 | H4-16 | [400] | [401] | [402] | [403] | [404] | [405] | [406] | |
59 | SLX4IP | Protein SLX4IP | [407] | [408] | [409] | [410] | [411] | [412] | [413] |
60 | H2AC6 | [414] | [415] | [416] | [417] | [418] | [419] | [420] | |
61 | H3-3A | [421] | [422] | [423] | [424] | [425] | [426] | [427] | |
62 | H4C8 | [428] | [429] | [430] | [431] | [432] | [433] | [434] | |
63 | H4C15 | [435] | [436] | [437] | [438] | [439] | [440] | [441] | |
64 | H4C2 | [442] | [443] | [444] | [445] | [446] | [447] | [448] | |
65 | H4C13 | [449] | [450] | [451] | [452] | [453] | [454] | [455] | |
66 | H4C4 | [456] | [457] | [458] | [459] | [460] | [461] | [462] | |
67 | H4C12 | [463] | [464] | [465] | [466] | [467] | [468] | [469] | |
68 | UVSSA | UV-stimulated scaffold protein A | [470] | [471] | [472] | [473] | [474] | [475] | [476] |
69 | H4C5 | [477] | [478] | [479] | [480] | [481] | [482] | [483] | |
70 | H3-3B | [484] | [485] | [486] | [487] | [488] | [489] | [490] | |
71 | H4C1 | [491] | [492] | [493] | [494] | [495] | [496] | [497] | |
72 | MIR4738 | [498] | [499] | [500] | [501] | [502] | [503] | [504] | |
73 | H4C6 | [505] | [506] | [507] | [508] | [509] | [510] | [511] | |
74 | H4C3 | [512] | [513] | [514] | [515] | [516] | [517] | [518] | |
75 | H4C14 | [519] | [520] | [521] | [522] | [523] | [524] | [525] | |
76 | H4C9 | [526] | [527] | [528] | [529] | [530] | [531] | [532] |