WP_IMMUNE_RESPONSE_TO_TUBERCULOSIS Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 PSMB8 Proteasome subunit beta type-8 [1] -2.04[2] -2.48[3] -9.48[4] -0.94[5] -1.55[6] -2.36[7]
2 IFITM1 Interferon-induced transmembrane protein 1 [8] -5.00[9] -2.54[10] -7.23[11] -5.63[12] -3.80[13] -1.34[14]
3 IFNGR1 Interferon gamma receptor 1 [15] 1.36[16] 0.50[17] -0.76[18] -0.63[19] -0.20[20] -0.58[21]
4 STAT1 Signal transducer and activator of transcription 1-alpha/beta [22] 0.51[23] -0.16[24] 1.15[25] 2.28[26] 0.68[27] 0.68[28]
5 IFNGR2 Interferon gamma receptor 2 [29] 0.55[30] 1.36[31] -0.47[32] -1.62[33] 0.34[34] -0.85[35]
6 JAK1 Tyrosine-protein kinase JAK1 [36] 1.09[37] 0.83[38] 1.21[39] 0.37[40] 1.69[41] 1.26[42]
7 IFI35 Interferon-induced 35 kDa protein [43] -0.94[44] -0.46[45] -0.68[46] -1.21[47] -1.41[48] -1.41[49]
8 IRF9 Interferon regulatory factor 9 [50] -0.23[51] -1.80[52] -1.34[53] -0.62[54] -0.98[55] -0.36[56]
9 IFNAR2 Interferon alpha/beta receptor 2 [57] -0.63[58] -0.72[59] 0.16[60] -1.64[61] -0.98[62] -1.05[63]
10 MX1 Interferon-induced GTP-binding protein Mx1 [64] -1.96[65] -4.46[66] -6.30[67] -3.24[68] -1.95[69] -0.45[70]
11 OAS1 2'-5'-oligoadenylate synthase 1 [71] -0.04[72] -2.68[73] -8.29[74] -3.00[75] -3.78[76] -0.69[77]
12 TAP1 Antigen peptide transporter 1 [78] 0.46[79] -0.30[80] -3.81[81] 1.33[82] 0.38[83] -0.94[84]
13 IFIT3 Interferon-induced protein with tetratricopeptide repeats 3 [85] -3.28[86] -5.20[87] -2.49[88] -1.39[89] -0.88[90] -0.77[91]
14 IFIT1 Interferon-induced protein with tetratricopeptide repeats 1 [92] -2.84[93] -4.47[94] -1.06[95] -2.14[96] -2.24[97] -0.90[98]
15 PTPN2 Tyrosine-protein phosphatase non-receptor type 2 [99] -0.27[100] 1.29[101] 1.87[102] -0.81[103] 0.00[104] -0.52[105]
16 IFNAR1 Interferon alpha/beta receptor 1 [106] 0.64[107] 1.37[108] 1.27[109] 0.73[110] 1.40[111] 2.17[112]
17 IRF1 Interferon regulatory factor 1 [113] 0.07[114] -0.15[115] 0.19[116] 1.00[117] 0.68[118] 0.57[119]
18 STAT2 Signal transducer and activator of transcription 2 [120] 0.61[121] 2.23[122] 1.58[123] 1.28[124] 1.40[125] 2.76[126]
19 TYK2 Non-receptor tyrosine-protein kinase TYK2 [127] 1.72[128] 2.33[129] 2.66[130] 0.49[131] 2.09[132] 1.72[133]
20 PIAS1 E3 SUMO-protein ligase PIAS1 [134] 0.63[135] 1.14[136] 2.24[137] 0.62[138] 1.02[139] 0.92[140]
21 MED14 Mediator of RNA polymerase II transcription subunit 14 [141] 2.14[142] 2.58[143] 3.66[144] 2.88[145] 3.37[146] 1.70[147]
22 SOCS1 Suppressor of cytokine signaling 1 [148] -0.87[149] 0.25[150] 0.72[151] -2.05[152] -2.75[153] -1.73[154]
23 JAK2 Tyrosine-protein kinase JAK2 [155] 0.81[156] 1.06[157] 0.81[158] 0.51[159] 1.78[160] 2.44[161]
[1]
ref_hepatocyte PSMB8
Mean 50
Standard deviation 23
Values 23 49 53 41 85
[2]
HepG2 PSMB8
Mean 17.9
Standard deviation 0.68
Values 17 18
[3]
HepG2.C3A PSMB8
Mean 9.87
Standard deviation 0.25
Values 10 9.7
[4]
HuH.7 PSMB8
Mean 0.0647
Standard deviation 0.041
Values 0.019 0.077 0.098
[5]
SNU475 PSMB8
Mean 56.9
Standard deviation 13
Values 48 66
[6]
THLE PSMB8
Mean 26.2
Standard deviation 0.55
Values 26 27
[7]
liver PSMB8
Mean 16.7
Standard deviation 11
Values 6.7 7.1 24 29
[8]
ref_hepatocyte IFITM1
Mean 31.1
Standard deviation 37
Values 11 67 75 0 2
[9]
HepG2 IFITM1
Mean 1.43
Standard deviation 1.4
Values 0.43 2.4
[10]
HepG2.C3A IFITM1
Mean 5.9
Standard deviation 2.5
Values 4.2 7.7
[11]
HuH.7 IFITM1
Mean 0.191
Standard deviation 0.071
Values 0.13 0.27 0.17
[12]
SNU475 IFITM1
Mean 1.37
Standard deviation 0.3
Values 1.6 1.2
[13]
THLE IFITM1
Mean 3.42
Standard deviation 0.92
Values 2.8 4.1
[14]
liver IFITM1
Mean 21
Standard deviation 20
Values 4.4 2.9 43 34
[15]
ref_hepatocyte IFNGR1
Mean 28.2
Standard deviation 11
Values 19 17 40 37 29
[16]
HepG2 IFNGR1
Mean 107
Standard deviation 26
Values 1.3e+02 89
[17]
HepG2.C3A IFNGR1
Mean 43.9
Standard deviation 3.3
Values 46 41
[18]
HuH.7 IFNGR1
Mean 15.3
Standard deviation 3.2
Values 17 18 12
[19]
SNU475 IFNGR1
Mean 39.8
Standard deviation 2.9
Values 42 38
[20]
THLE IFNGR1
Mean 37.6
Standard deviation 3.6
Values 40 35
[21]
liver IFNGR1
Mean 32.2
Standard deviation 10
Values 22 27 35 46
[22]
ref_hepatocyte STAT1
Mean 20.3
Standard deviation 8.7
Values 19 18 12 17 35
[23]
HepG2 STAT1
Mean 42.7
Standard deviation 9.4
Values 49 36
[24]
HepG2.C3A STAT1
Mean 20.1
Standard deviation 7.2
Values 25 15
[25]
HuH.7 STAT1
Mean 41.6
Standard deviation 4.5
Values 40 38 47
[26]
SNU475 STAT1
Mean 216
Standard deviation 1.4e+02
Values 1.1e+02 3.2e+02
[27]
THLE STAT1
Mean 50.3
Standard deviation 2.1
Values 49 52
[28]
liver STAT1
Mean 55.8
Standard deviation 15
Values 38 69 49 67
[29]
ref_hepatocyte IFNGR2
Mean 15.8
Standard deviation 5.2
Values 17 9.9 13 24 15
[30]
HepG2 IFNGR2
Mean 34.1
Standard deviation 5.2
Values 30 38
[31]
HepG2.C3A IFNGR2
Mean 44.8
Standard deviation 16
Values 33 56
[32]
HuH.7 IFNGR2
Mean 10.6
Standard deviation 1.9
Values 11 12 8.3
[33]
SNU475 IFNGR2
Mean 11.3
Standard deviation 2.5
Values 9.5 13
[34]
THLE IFNGR2
Mean 30.8
Standard deviation 6.2
Values 26 35
[35]
liver IFNGR2
Mean 15
Standard deviation 7.9
Values 8.5 7.8 21 22
[36]
ref_hepatocyte JAK1
Mean 15.2
Standard deviation 7.8
Values 18 10 14 6.8 27
[37]
HepG2 JAK1
Mean 47.8
Standard deviation 11
Values 56 40
[38]
HepG2.C3A JAK1
Mean 29.8
Standard deviation 1.3
Values 29 31
[39]
HuH.7 JAK1
Mean 32.5
Standard deviation 3.3
Values 29 32 36
[40]
SNU475 JAK1
Mean 43.1
Standard deviation 5.5
Values 39 47
[41]
THLE JAK1
Mean 75.4
Standard deviation 6.9
Values 70 80
[42]
liver JAK1
Mean 62.3
Standard deviation 9.1
Values 62 75 54 58
[43]
ref_hepatocyte IFI35
Mean 14.9
Standard deviation 4
Values 10 18 16 11 19
[44]
HepG2 IFI35
Mean 11.4
Standard deviation 0.81
Values 12 11
[45]
HepG2.C3A IFI35
Mean 11.9
Standard deviation 0.33
Values 12 12
[46]
HuH.7 IFI35
Mean 8.6
Standard deviation 1.3
Values 9.5 7.1 9.2
[47]
SNU475 IFI35
Mean 14
Standard deviation 2.8
Values 12 16
[48]
THLE IFI35
Mean 8.58
Standard deviation 0.18
Values 8.7 8.4
[49]
liver IFI35
Mean 9.57
Standard deviation 6.9
Values 3.4 4 17 14
[50]
ref_hepatocyte IRF9
Mean 13
Standard deviation 3.9
Values 14 16 17 7.9 10
[51]
HepG2 IRF9
Mean 16.3
Standard deviation 3.8
Values 14 19
[52]
HepG2.C3A IRF9
Mean 4.11
Standard deviation 0.77
Values 3.6 4.7
[53]
HuH.7 IRF9
Mean 4.77
Standard deviation 2
Values 4.6 6.9 2.8
[54]
SNU475 IRF9
Mean 18.5
Standard deviation 3.8
Values 16 21
[55]
THLE IRF9
Mean 10.1
Standard deviation 0.59
Values 9.7 11
[56]
liver IRF9
Mean 17.3
Standard deviation 10
Values 7.3 9.7 24 28
[57]
ref_hepatocyte IFNAR2
Mean 12.8
Standard deviation 6.4
Values 22 7.5 9.2 8 18
[58]
HepG2 IFNAR2
Mean 12.2
Standard deviation 0.31
Values 12 12
[59]
HepG2.C3A IFNAR2
Mean 8.58
Standard deviation 1.2
Values 7.7 9.4
[60]
HuH.7 IFNAR2
Mean 13.2
Standard deviation 0.52
Values 13 14 13
[61]
SNU475 IFNAR2
Mean 8.96
Standard deviation 1.9
Values 7.6 10
[62]
THLE IFNAR2
Mean 9.98
Standard deviation 0.57
Values 9.6 10
[63]
liver IFNAR2
Mean 10.6
Standard deviation 1.7
Values 9.4 11 9 13
[64]
ref_hepatocyte MX1
Mean 11.9
Standard deviation 11
Values 24 5.4 4.3 1.3 24
[65]
HepG2 MX1
Mean 4.51
Standard deviation 2.6
Values 2.7 6.3
[66]
HepG2.C3A MX1
Mean 0.596
Standard deviation 0.31
Values 0.38 0.82
[67]
HuH.7 MX1
Mean 0.139
Standard deviation 0.037
Values 0.13 0.18 0.11
[68]
SNU475 MX1
Mean 2.75
Standard deviation 0.99
Values 2.1 3.5
[69]
THLE MX1
Mean 4.71
Standard deviation 0.54
Values 5.1 4.3
[70]
liver MX1
Mean 14.9
Standard deviation 7.3
Values 5.3 13 19 22
[71]
ref_hepatocyte OAS1
Mean 11.6
Standard deviation 7.3
Values 8.4 15 15 0.48 19
[72]
HepG2 OAS1
Mean 16.6
Standard deviation 9.7
Values 9.8 23
[73]
HepG2.C3A OAS1
Mean 2
Standard deviation 1.1
Values 2.8 1.2
[74]
HuH.7 OAS1
Mean 0.0343
Standard deviation 0.028
Values 0.066 0.013 0.025
[75]
SNU475 OAS1
Mean 3.17
Standard deviation 0.99
Values 2.5 3.9
[76]
THLE OAS1
Mean 1.3
Standard deviation 0.34
Values 1.5 1.1
[77]
liver OAS1
Mean 12.3
Standard deviation 6.7
Values 5.3 7.9 17 19
[78]
ref_hepatocyte TAP1
Mean 10.3
Standard deviation 5
Values 14 5.7 7.8 6.7 17
[79]
HepG2 TAP1
Mean 21
Standard deviation 2.1
Values 19 22
[80]
HepG2.C3A TAP1
Mean 9.23
Standard deviation 0.066
Values 9.2 9.3
[81]
HuH.7 TAP1
Mean 0.679
Standard deviation 0.4
Values 0.46 1.1 0.43
[82]
SNU475 TAP1
Mean 56.8
Standard deviation 21
Values 42 71
[83]
THLE TAP1
Mean 20.6
Standard deviation 0.4
Values 20 21
[84]
liver TAP1
Mean 9.22
Standard deviation 1.7
Values 9.3 7.3 8.8 11
[85]
ref_hepatocyte IFIT3
Mean 9.66
Standard deviation 9.8
Values 12 5.3 2.6 2.7 26
[86]
HepG2 IFIT3
Mean 1.47
Standard deviation 0.08
Values 1.5 1.4
[87]
HepG2.C3A IFIT3
Mean 0.29
Standard deviation 0.14
Values 0.39 0.19
[88]
HuH.7 IFIT3
Mean 1.59
Standard deviation 0.71
Values 1.2 2.4 1.2
[89]
SNU475 IFIT3
Mean 8.04
Standard deviation 2
Values 6.7 9.4
[90]
THLE IFIT3
Mean 8.07
Standard deviation 0.13
Values 8 8.2
[91]
liver IFIT3
Mean 9.69
Standard deviation 3.3
Values 5 10 11 13
[92]
ref_hepatocyte IFIT1
Mean 9.19
Standard deviation 6.9
Values 5.8 17 5.2 1.8 16
[93]
HepG2 IFIT1
Mean 1.9
Standard deviation 1.3
Values 0.98 2.8
[94]
HepG2.C3A IFIT1
Mean 0.458
Standard deviation 0.16
Values 0.34 0.57
[95]
HuH.7 IFIT1
Mean 4.07
Standard deviation 0.9
Values 4.9 4.3 3.1
[96]
SNU475 IFIT1
Mean 4.55
Standard deviation 1.4
Values 3.6 5.5
[97]
THLE IFIT1
Mean 2.99
Standard deviation 0.06
Values 3 3
[98]
liver IFIT1
Mean 8.45
Standard deviation 4.9
Values 5.2 5.9 16 7
[99]
ref_hepatocyte PTPN2
Mean 8.27
Standard deviation 3
Values 9.1 8.8 13 5 6
[100]
HepG2 PTPN2
Mean 10.1
Standard deviation 2.9
Values 12 8
[101]
HepG2.C3A PTPN2
Mean 22.3
Standard deviation 0.11
Values 22 22
[102]
HuH.7 PTPN2
Mean 28
Standard deviation 2.9
Values 31 25 28
[103]
SNU475 PTPN2
Mean 10.3
Standard deviation 2
Values 12 8.9
[104]
THLE PTPN2
Mean 12.7
Standard deviation 0.75
Values 12 13
[105]
liver PTPN2
Mean 9.84
Standard deviation 1.6
Values 8.9 8.1 11 12
[106]
ref_hepatocyte IFNAR1
Mean 7.46
Standard deviation 3.8
Values 3.9 12 11 3.7 6.8
[107]
HepG2 IFNAR1
Mean 17.2
Standard deviation 4.5
Values 20 14
[108]
HepG2.C3A IFNAR1
Mean 21.2
Standard deviation 0.44
Values 22 21
[109]
HuH.7 IFNAR1
Mean 16.6
Standard deviation 2.6
Values 14 19 17
[110]
SNU475 IFNAR1
Mean 27.1
Standard deviation 2
Values 26 29
[111]
THLE IFNAR1
Mean 30.2
Standard deviation 1.7
Values 29 31
[112]
liver IFNAR1
Mean 57.2
Standard deviation 9.6
Values 49 70 50 60
[113]
ref_hepatocyte IRF1
Mean 6.09
Standard deviation 3.2
Values 11 4.2 7.1 3.2 4.7
[114]
HepG2 IRF1
Mean 9.46
Standard deviation 1.7
Values 11 8.2
[115]
HepG2.C3A IRF1
Mean 6.08
Standard deviation 0.89
Values 5.4 6.7
[116]
HuH.7 IRF1
Mean 6.43
Standard deviation 1.6
Values 6.1 8.1 5.1
[117]
SNU475 IRF1
Mean 26.8
Standard deviation 8.1
Values 21 32
[118]
THLE IRF1
Mean 15
Standard deviation 0.58
Values 15 15
[119]
liver IRF1
Mean 15.4
Standard deviation 7.2
Values 13 6.7 23 19
[120]
ref_hepatocyte STAT2
Mean 5.97
Standard deviation 4.9
Values 2.3 13 9.4 2.5 2.7
[121]
HepG2 STAT2
Mean 13.4
Standard deviation 4
Values 16 11
[122]
HepG2.C3A STAT2
Mean 30.9
Standard deviation 3.5
Values 28 33
[123]
HuH.7 STAT2
Mean 16.5
Standard deviation 0.99
Values 17 16 16
[124]
SNU475 STAT2
Mean 31.7
Standard deviation 16
Values 20 43
[125]
THLE STAT2
Mean 24.3
Standard deviation 2
Values 26 23
[126]
liver STAT2
Mean 69
Standard deviation 4.2
Values 68 74 70 64
[127]
ref_hepatocyte TYK2
Mean 4.82
Standard deviation 1.6
Values 5.2 5.6 6.8 2.6 4
[128]
HepG2 TYK2
Mean 23.5
Standard deviation 0.9
Values 24 23
[129]
HepG2.C3A TYK2
Mean 26.8
Standard deviation 2.6
Values 25 29
[130]
HuH.7 TYK2
Mean 28.1
Standard deviation 8.5
Values 31 19 35
[131]
SNU475 TYK2
Mean 14.9
Standard deviation 0.21
Values 15 15
[132]
THLE TYK2
Mean 31.6
Standard deviation 1.6
Values 33 31
[133]
liver TYK2
Mean 27.2
Standard deviation 3.5
Values 30 24 31 24
[134]
ref_hepatocyte PIAS1
Mean 2.96
Standard deviation 1.1
Values 4.9 2.7 2.2 2.2 2.9
[135]
HepG2 PIAS1
Mean 6.75
Standard deviation 3.6
Values 9.3 4.2
[136]
HepG2.C3A PIAS1
Mean 7.18
Standard deviation 2
Values 8.6 5.7
[137]
HuH.7 PIAS1
Mean 12.9
Standard deviation 1.7
Values 12 12 15
[138]
SNU475 PIAS1
Mean 9.97
Standard deviation 0.61
Values 9.5 10
[139]
THLE PIAS1
Mean 9.23
Standard deviation 0.13
Values 9.1 9.3
[140]
liver PIAS1
Mean 9.55
Standard deviation 5.5
Values 4.3 5.5 15 13
[141]
ref_hepatocyte MED14
Mean 2.21
Standard deviation 0.56
Values 2.9 1.4 1.9 2.3 2.4
[142]
HepG2 MED14
Mean 14.4
Standard deviation 4.3
Values 17 11
[143]
HepG2.C3A MED14
Mean 14.6
Standard deviation 2.1
Values 16 13
[144]
HuH.7 MED14
Mean 25.9
Standard deviation 4.6
Values 22 24 31
[145]
SNU475 MED14
Mean 35.7
Standard deviation 4.7
Values 32 39
[146]
THLE MED14
Mean 35.2
Standard deviation 8
Values 30 41
[147]
liver MED14
Mean 12.3
Standard deviation 2.7
Values 14 14 13 8.4
[148]
ref_hepatocyte SOCS1
Mean 2.1
Standard deviation 1.9
Values 1.3 3.4 4.7 1.1 0
[149]
HepG2 SOCS1
Mean 1.7
Standard deviation 0.19
Values 1.6 1.8
[150]
HepG2.C3A SOCS1
Mean 2.76
Standard deviation 1.3
Values 1.9 3.7
[151]
HuH.7 SOCS1
Mean 3.19
Standard deviation 2.1
Values 5.3 1 3.3
[152]
SNU475 SOCS1
Mean 1.11
Standard deviation 0.23
Values 0.95 1.3
[153]
THLE SOCS1
Mean 0.479
Standard deviation 0.076
Values 0.53 0.43
[154]
liver SOCS1
Mean 1.08
Standard deviation 0.8
Values 2.2 0.27 1.1 0.8
[155]
ref_hepatocyte JAK2
Mean 0.762
Standard deviation 0.48
Values 0.62 0.5 0.18 1.3 1.3
[156]
HepG2 JAK2
Mean 1.97
Standard deviation 1.3
Values 2.9 1
[157]
HepG2.C3A JAK2
Mean 1.75
Standard deviation 0.67
Values 2.2 1.3
[158]
HuH.7 JAK2
Mean 1.23
Standard deviation 0.34
Values 0.9 1.6 1.2
[159]
SNU475 JAK2
Mean 2.37
Standard deviation 0.1
Values 2.4 2.3
[160]
THLE JAK2
Mean 4.02
Standard deviation 0.77
Values 4.6 3.5
[161]
liver JAK2
Mean 7.06
Standard deviation 3.8
Values 9.8 11 4.7 2.9