WP_HOMOLOGOUS_RECOMBINATION Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 POLD2 DNA polymerase delta subunit 2 [1] -0.47[2] -0.89[3] -0.71[4] -2.00[5] -0.97[6] -0.65[7]
2 POLD4 DNA polymerase delta subunit 4 [8] -2.00[9] -2.94[10] -1.19[11] 0.32[12] -2.62[13] -1.00[14]
3 RPA1 Replication protein A 70 kDa DNA-binding subunit [15] 1.44[16] 0.58[17] 0.53[18] 0.72[19] 1.40[20] -0.52[21]
4 NBN Nibrin [22] -0.29[23] 0.30[24] -0.27[25] 0.38[26] 0.15[27] 0.75[28]
5 RAD51 DNA repair protein RAD51 homolog 1 [29] -0.12[30] -0.90[31] -1.13[32] -1.31[33] -0.69[34] -4.47[35]
6 RAD50 DNA repair protein RAD50 [36] 0.28[37] 1.82[38] 0.65[39] 0.14[40] 1.28[41] 1.68[42]
7 POLD1 DNA polymerase delta catalytic subunit [43] 1.99[44] 1.62[45] 2.11[46] 0.70[47] 2.11[48] 0.14[49]
8 POLD3 DNA polymerase delta subunit 3 [50] 1.30[51] 0.58[52] 1.23[53] 0.99[54] 2.13[55] 0.46[56]
9 RAD52 DNA repair protein RAD52 homolog [57] 0.51[58] 0.68[59] 0.46[60] -1.54[61] -0.43[62] 0.23[63]
10 ATM Serine-protein kinase ATM [64] 3.16[65] 4.17[66] 3.57[67] 3.03[68] 3.17[69] 4.46[70]
11 RAD54B DNA repair and recombination protein RAD54B [71] 0.88[72] 2.11[73] 2.51[74] 1.56[75] 1.64[76] -0.86[77]
12 BRCA2 Breast cancer type 2 susceptibility protein [78] 2.93[79] 4.83[80] 4.67[81] 3.35[82] 4.16[83] 2.91[84]
13 MRE11 Double-strand break repair protein MRE11 [85] [86] [87] [88] [89] [90] [91]
[1]
ref_hepatocyte POLD2
Mean 32.3
Standard deviation 18
Values 30 40 58 10 23
[2]
HepG2 POLD2
Mean 47
Standard deviation 5.6
Values 43 51
[3]
HepG2.C3A POLD2
Mean 47.2
Standard deviation 5.4
Values 51 43
[4]
HuH.7 POLD2
Mean 64.5
Standard deviation 25
Values 79 36 79
[5]
SNU475 POLD2
Mean 32.5
Standard deviation 4.3
Values 35 29
[6]
THLE POLD2
Mean 47.1
Standard deviation 7.9
Values 41 53
[7]
liver POLD2
Mean 42.1
Standard deviation 24
Values 23 21 67 57
[8]
ref_hepatocyte POLD4
Mean 31.5
Standard deviation 27
Values 19 57 64 1.6 16
[9]
HepG2 POLD4
Mean 15.9
Standard deviation 3.9
Values 13 19
[10]
HepG2.C3A POLD4
Mean 11.1
Standard deviation 4
Values 8.3 14
[11]
HuH.7 POLD4
Mean 45.1
Standard deviation 6.1
Values 46 51 39
[12]
SNU475 POLD4
Mean 157
Standard deviation 53
Values 1.2e+02 1.9e+02
[13]
THLE POLD4
Mean 14.6
Standard deviation 1.8
Values 13 16
[14]
liver POLD4
Mean 32.1
Standard deviation 32
Values 5.3 6 48 69
[15]
ref_hepatocyte RPA1
Mean 8.25
Standard deviation 3.9
Values 5.5 6.7 5.3 9.2 15
[16]
HepG2 RPA1
Mean 45.3
Standard deviation 8.3
Values 51 39
[17]
HepG2.C3A RPA1
Mean 33.6
Standard deviation 11
Values 41 26
[18]
HuH.7 RPA1
Mean 39
Standard deviation 14
Values 48 23 47
[19]
SNU475 RPA1
Mean 54.6
Standard deviation 1
Values 54 55
[20]
THLE RPA1
Mean 62.1
Standard deviation 11
Values 54 70
[21]
liver RPA1
Mean 11.7
Standard deviation 1.8
Values 9.5 12 12 14
[22]
ref_hepatocyte NBN
Mean 5.99
Standard deviation 3.6
Values 3.9 4.3 2.7 7.6 11
[23]
HepG2 NBN
Mean 9.9
Standard deviation 6.3
Values 14 5.4
[24]
HepG2.C3A NBN
Mean 20
Standard deviation 9.1
Values 26 14
[25]
HuH.7 NBN
Mean 16.2
Standard deviation 4.2
Values 17 12 20
[26]
SNU475 NBN
Mean 31.2
Standard deviation 0.96
Values 32 30
[27]
THLE NBN
Mean 19
Standard deviation 0.88
Values 20 18
[28]
liver NBN
Mean 20.5
Standard deviation 4.2
Values 16 24 19 24
[29]
ref_hepatocyte RAD51
Mean 4.73
Standard deviation 7.4
Values 0.36 0.24 0.2 17 5.6
[30]
HepG2 RAD51
Mean 8.76
Standard deviation 0.7
Values 9.3 8.3
[31]
HepG2.C3A RAD51
Mean 6.88
Standard deviation 3.6
Values 9.4 4.3
[32]
HuH.7 RAD51
Mean 7.06
Standard deviation 4.4
Values 10 2 8.8
[33]
SNU475 RAD51
Mean 7.64
Standard deviation 1.6
Values 8.8 6.5
[34]
THLE RAD51
Mean 8.38
Standard deviation 1.2
Values 7.5 9.2
[35]
liver RAD51
Mean 0.436
Standard deviation 0.3
Values 0.33 0.19 0.35 0.87
[36]
ref_hepatocyte RAD50
Mean 3.85
Standard deviation 2.1
Values 2.3 2.8 2.9 3.9 7.4
[37]
HepG2 RAD50
Mean 9.45
Standard deviation 2.3
Values 11 7.9
[38]
HepG2.C3A RAD50
Mean 36.9
Standard deviation 0.99
Values 36 38
[39]
HuH.7 RAD50
Mean 19.7
Standard deviation 4.1
Values 15 22 22
[40]
SNU475 RAD50
Mean 17
Standard deviation 2.2
Values 19 15
[41]
THLE RAD50
Mean 26.8
Standard deviation 8.4
Values 33 21
[42]
liver RAD50
Mean 25.2
Standard deviation 5.7
Values 18 26 32 25
[43]
ref_hepatocyte POLD1
Mean 2.41
Standard deviation 0.8
Values 2.7 1.4 2.4 2 3.5
[44]
HepG2 POLD1
Mean 19.3
Standard deviation 1.9
Values 18 21
[45]
HepG2.C3A POLD1
Mean 20.1
Standard deviation 2.3
Values 22 18
[46]
HuH.7 POLD1
Mean 34
Standard deviation 15
Values 44 16 42
[47]
SNU475 POLD1
Mean 15.6
Standard deviation 2.9
Values 18 14
[48]
THLE POLD1
Mean 29.7
Standard deviation 2.6
Values 28 32
[49]
liver POLD1
Mean 5.43
Standard deviation 0.68
Values 5.1 4.7 6.2 5.8
[50]
ref_hepatocyte POLD3
Mean 1.46
Standard deviation 0.56
Values 1 0.71 1.8 1.9 1.9
[51]
HepG2 POLD3
Mean 7.29
Standard deviation 0.95
Values 8 6.6
[52]
HepG2.C3A POLD3
Mean 5.94
Standard deviation 4
Values 8.8 3.1
[53]
HuH.7 POLD3
Mean 11.2
Standard deviation 6.1
Values 14 4.1 15
[54]
SNU475 POLD3
Mean 11.6
Standard deviation 3.7
Values 14 9
[55]
THLE POLD3
Mean 18.3
Standard deviation 1.6
Values 17 19
[56]
liver POLD3
Mean 4.11
Standard deviation 1.1
Values 3 4.3 3.6 5.6
[57]
ref_hepatocyte RAD52
Mean 1.25
Standard deviation 1
Values 0.41 0.69 0.69 3 1.5
[58]
HepG2 RAD52
Mean 3.59
Standard deviation 0.51
Values 4 3.2
[59]
HepG2.C3A RAD52
Mean 5.44
Standard deviation 1.1
Values 6.2 4.6
[60]
HuH.7 RAD52
Mean 5.64
Standard deviation 0.31
Values 6 5.5 5.5
[61]
SNU475 RAD52
Mean 1.72
Standard deviation 0.32
Values 1.5 1.9
[62]
THLE RAD52
Mean 2.65
Standard deviation 0.0047
Values 2.7 2.6
[63]
liver RAD52
Mean 3
Standard deviation 0.29
Values 2.8 3.4 2.8 3
[64]
ref_hepatocyte ATM
Mean 0.969
Standard deviation 0.7
Values 0.27 1.1 0.7 2.1 0.69
[65]
HepG2 ATM
Mean 17.5
Standard deviation 8.3
Values 23 12
[66]
HepG2.C3A ATM
Mean 47.4
Standard deviation 4.5
Values 51 44
[67]
HuH.7 ATM
Mean 37.5
Standard deviation 9.1
Values 27 44 41
[68]
SNU475 ATM
Mean 31.7
Standard deviation 8.2
Values 26 38
[69]
THLE ATM
Mean 24.9
Standard deviation 4.4
Values 28 22
[70]
liver ATM
Mean 43.7
Standard deviation 31
Values 64 76 17 17
[71]
ref_hepatocyte RAD54B
Mean 0.769
Standard deviation 0.76
Values 0.049 0.39 0.29 1.8 1.3
[72]
HepG2 RAD54B
Mean 2.85
Standard deviation 2
Values 4.2 1.5
[73]
HepG2.C3A RAD54B
Mean 9.03
Standard deviation 4.8
Values 12 5.6
[74]
HuH.7 RAD54B
Mean 14.3
Standard deviation 2
Values 17 13 13
[75]
SNU475 RAD54B
Mean 9.08
Standard deviation 2.4
Values 11 7.4
[76]
THLE RAD54B
Mean 6.87
Standard deviation 0.0047
Values 6.9 6.9
[77]
liver RAD54B
Mean 0.869
Standard deviation 0.41
Values 0.78 1.4 0.87 0.41
[78]
ref_hepatocyte BRCA2
Mean 0.134
Standard deviation 0.16
Values 0 0.041 0.026 0.26 0.35
[79]
HepG2 BRCA2
Mean 2.06
Standard deviation 0.93
Values 2.7 1.4
[80]
HepG2.C3A BRCA2
Mean 10.4
Standard deviation 8.9
Values 17 4.1
[81]
HuH.7 BRCA2
Mean 11.2
Standard deviation 6.2
Values 9.6 5.9 18
[82]
SNU475 BRCA2
Mean 5.48
Standard deviation 3.4
Values 7.9 3.1
[83]
THLE BRCA2
Mean 6.84
Standard deviation 2
Values 8.2 5.4
[84]
liver BRCA2
Mean 2.07
Standard deviation 0.83
Values 1.6 3.3 1.6 1.7
[85]
ref_hepatocyte MRE11
Missing
[86]
HepG2 MRE11
Missing
[87]
HepG2.C3A MRE11
Missing
[88]
HuH.7 MRE11
Missing
[89]
SNU475 MRE11
Missing
[90]
THLE MRE11
Missing
[91]
liver MRE11
Missing