WP_HEMATOPOIETIC_STEM_CELL_GENE_REGULATION_BY_GABP_ALPHABETA_COMPLEX Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 MCL1 Induced myeloid leukemia cell differentiation protein Mcl-1 [1] -1.44[2] -1.29[3] -1.66[4] -0.68[5] -0.48[6] -0.99[7]
2 BCL2L1 Bcl-2-like protein 1 [8] 0.85[9] 0.44[10] 0.84[11] -1.45[12] -1.35[13] -1.90[14]
3 SMARCA4 Transcription activator BRG1 [15] 1.10[16] 0.13[17] 0.68[18] 0.56[19] 0.70[20] -0.55[21]
4 PTEN Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN -1.83[22] -0.23[23] -0.59[24] -1.40[25] -0.44[26] 1.40[27]
5 GABPB1 GA-binding protein subunit beta-1 [28] -1.84[29] -1.06[30] -2.11[31] -1.13[32] -1.31[33] -1.73[34]
6 TERF2 Telomeric repeat-binding factor 2 [35] -0.98[36] -0.77[37] -0.56[38] -0.92[39] -0.80[40] -1.52[41]
7 DNMT1 DNA (cytosine-5)-methyltransferase 1 [42] 1.68[43] 1.40[44] 1.73[45] 2.27[46] 2.63[47] 0.01[48]
8 SMAD4 Mothers against decapentaplegic homolog 4 [49] 0.11[50] 0.94[51] 0.35[52] 1.08[53] 1.15[54] 1.71[55]
9 GABPA GA-binding protein alpha chain [56] -1.06[57] 0.49[58] -0.10[59] 1.18[60] -0.06[61] 0.78[62]
10 DNMT3A DNA (cytosine-5)-methyltransferase 3A [63] 0.23[64] 0.75[65] 0.09[66] -0.80[67] -1.69[68] -0.56[69]
11 FOXO3 Forkhead box protein O3 [70] -0.83[71] -0.54[72] -0.46[73] -0.43[74] 0.51[75] 1.26[76]
12 ZFX Zinc finger X-chromosomal protein [77] -1.36[78] 0.45[79] 0.04[80] 1.44[81] 0.92[82] 1.95[83]
13 EP300 Histone acetyltransferase p300 [84] 1.43[85] 1.23[86] 1.57[87] 1.74[88] 1.50[89] 1.68[90]
14 DNMT3B DNA (cytosine-5)-methyltransferase 3B [91] 0.43[92] -0.19[93] -1.17[94] -0.31[95] -2.01[96] -3.05[97]
15 CREBBP CREB-binding protein [98] 1.61[99] 1.03[100] 1.08[101] 1.92[102] 1.64[103] 2.16[104]
16 ETV6 Transcription factor ETV6 [105] -0.96[106] -0.70[107] -1.12[108] 0.83[109] 0.13[110] 0.51[111]
17 ATM Serine-protein kinase ATM [112] 1.74[113] 3.55[114] 2.72[115] 3.32[116] 2.51[117] 3.91[118]
18 GZMB Granzyme B [119] -5.91[120] [121] [122] [123] [124] -1.79[125]
19 BCL2 Apoptosis regulator Bcl-2 [126] -4.14[127] 1.46[128] -6.50[129] 0.94[130] 0.36[131] 2.15[132]
20 FLT3 Receptor-type tyrosine-protein kinase FLT3 [133] [134] [135] -5.14[136] -3.63[137] [138] 1.84[139]
21 MIR1281 [140] [141] [142] [143] [144] [145] [146]
22 GABPB1-IT1 [147] [148] [149] [150] [151] [152] [153]
[1]
ref_hepatocyte MCL1
Mean 51.6
Standard deviation 21
Values 68 45 71 19 55
[2]
HepG2 MCL1
Mean 103
Standard deviation 11
Values 1.1e+02 95
[3]
HepG2.C3A MCL1
Mean 88.2
Standard deviation 15
Values 78 99
[4]
HuH.7 MCL1
Mean 96.5
Standard deviation 9.6
Values 89 1.1e+02 94
[5]
SNU475 MCL1
Mean 105
Standard deviation 9
Values 99 1.1e+02
[6]
THLE MCL1
Mean 166
Standard deviation 39
Values 1.4e+02 1.9e+02
[7]
liver MCL1
Mean 77.6
Standard deviation 52
Values 1.4e+02 1.1e+02 41 28
[8]
ref_hepatocyte BCL2L1
Mean 26.8
Standard deviation 12
Values 34 16 23 16 44
[9]
HepG2 BCL2L1
Mean 260
Standard deviation 56
Values 2.2e+02 3e+02
[10]
HepG2.C3A BCL2L1
Mean 152
Standard deviation 4.3
Values 1.5e+02 1.5e+02
[11]
HuH.7 BCL2L1
Mean 283
Standard deviation 60
Values 3.2e+02 2.1e+02 3.1e+02
[12]
SNU475 BCL2L1
Mean 32.1
Standard deviation 4.1
Values 35 29
[13]
THLE BCL2L1
Mean 47
Standard deviation 4.7
Values 44 50
[14]
liver BCL2L1
Mean 21.6
Standard deviation 11
Values 14 9.8 31 31
[15]
ref_hepatocyte SMARCA4
Mean 7.57
Standard deviation 3.6
Values 8 3.3 4.5 11 11
[16]
HepG2 SMARCA4
Mean 87.8
Standard deviation 16
Values 76 99
[17]
HepG2.C3A SMARCA4
Mean 34.6
Standard deviation 2
Values 33 36
[18]
HuH.7 SMARCA4
Mean 71.6
Standard deviation 30
Values 70 43 1e+02
[19]
SNU475 SMARCA4
Mean 36.4
Standard deviation 0.56
Values 36 37
[20]
THLE SMARCA4
Mean 55.3
Standard deviation 15
Values 45 66
[21]
liver SMARCA4
Mean 15.5
Standard deviation 2.3
Values 18 15 17 13
[22]
ref_hepatocyte PTEN
Mean 6.57
Standard deviation 2.4
Values 5.2 11 7 4.2 5.9
[23]
HepG2 PTEN
Mean 9.98
Standard deviation 2.3
Values 12 8.4
[24]
HepG2.C3A PTEN
Mean 23.3
Standard deviation 3.3
Values 21 26
[25]
HuH.7 PTEN
Mean 25.7
Standard deviation 12
Values 19 39 19
[26]
SNU475 PTEN
Mean 8.16
Standard deviation 1.8
Values 6.9 9.4
[27]
THLE PTEN
Mean 21.8
Standard deviation 0.98
Values 22 21
[28]
liver PTEN
Mean 52
Standard deviation 9.3
Values 53 55 61 39
[29]
ref_hepatocyte GABPB1
Mean 6
Standard deviation 3.4
Values 10 2.5 2.9 5.7 8.9
[30]
HepG2 GABPB1
Mean 9.03
Standard deviation 0.87
Values 9.6 8.4
[31]
HepG2.C3A GABPB1
Mean 12
Standard deviation 2.6
Values 14 10
[32]
HuH.7 GABPB1
Mean 8.21
Standard deviation 0.96
Values 9.3 7.4 8
[33]
SNU475 GABPB1
Mean 8.96
Standard deviation 0.34
Values 9.2 8.7
[34]
THLE GABPB1
Mean 10.9
Standard deviation 0.65
Values 11 10
[35]
liver GABPB1
Mean 5.43
Standard deviation 0.31
Values 5.2 5.2 5.8 5.6
[36]
ref_hepatocyte TERF2
Mean 4.13
Standard deviation 0.67
Values 4.6 3.2 3.7 4.9 4.3
[37]
HepG2 TERF2
Mean 11.3
Standard deviation 0.25
Values 11 11
[38]
HepG2.C3A TERF2
Mean 10.1
Standard deviation 0.26
Values 10 9.9
[39]
HuH.7 TERF2
Mean 16.5
Standard deviation 2.9
Values 19 13 17
[40]
SNU475 TERF2
Mean 7.14
Standard deviation 0.058
Values 7.2 7.1
[41]
THLE TERF2
Mean 10.6
Standard deviation 0.15
Values 11 11
[42]
liver TERF2
Mean 4.32
Standard deviation 1.4
Values 3.7 3.6 6.4 3.6
[43]
ref_hepatocyte DNMT1
Mean 3.28
Standard deviation 1.4
Values 3.3 1.6 2.4 5.2 3.9
[44]
HepG2 DNMT1
Mean 56.5
Standard deviation 6.2
Values 61 52
[45]
HepG2.C3A DNMT1
Mean 36.1
Standard deviation 9.3
Values 43 30
[46]
HuH.7 DNMT1
Mean 63.9
Standard deviation 30
Values 76 30 86
[47]
SNU475 DNMT1
Mean 51.7
Standard deviation 9.8
Values 59 45
[48]
THLE DNMT1
Mean 91.2
Standard deviation 13
Values 82 1e+02
[49]
liver DNMT1
Mean 9.87
Standard deviation 1
Values 9.5 11 8.6 11
[50]
ref_hepatocyte SMAD4
Mean 3.16
Standard deviation 0.71
Values 4.2 3.4 2.4 2.9 2.8
[51]
HepG2 SMAD4
Mean 18.3
Standard deviation 3.2
Values 21 16
[52]
HepG2.C3A SMAD4
Mean 25.2
Standard deviation 3
Values 23 27
[53]
HuH.7 SMAD4
Mean 23.6
Standard deviation 3.4
Values 20 27 24
[54]
SNU475 SMAD4
Mean 21.8
Standard deviation 2.7
Values 20 24
[55]
THLE SMAD4
Mean 31.4
Standard deviation 1.4
Values 30 32
[56]
liver SMAD4
Mean 31
Standard deviation 13
Values 44 40 23 16
[57]
ref_hepatocyte GABPA
Mean 3.04
Standard deviation 1
Values 3.5 3.9 1.5 2.6 3.8
[58]
HepG2 GABPA
Mean 7.88
Standard deviation 3.6
Values 10 5.4
[59]
HepG2.C3A GABPA
Mean 17.8
Standard deviation 5.3
Values 22 14
[60]
HuH.7 GABPA
Mean 16.7
Standard deviation 1.8
Values 16 16 19
[61]
SNU475 GABPA
Mean 22.5
Standard deviation 5.6
Values 19 26
[62]
THLE GABPA
Mean 13.1
Standard deviation 0.31
Values 13 13
[63]
liver GABPA
Mean 15.7
Standard deviation 3.5
Values 19 19 13 13
[64]
ref_hepatocyte DNMT3A
Mean 2.8
Standard deviation 3.3
Values 1.1 1.3 1.2 8.7 1.7
[65]
HepG2 DNMT3A
Mean 17.7
Standard deviation 0.61
Values 17 18
[66]
HepG2.C3A DNMT3A
Mean 19.7
Standard deviation 0.75
Values 20 19
[67]
HuH.7 DNMT3A
Mean 17.6
Standard deviation 2.3
Values 16 16 20
[68]
SNU475 DNMT3A
Mean 5.28
Standard deviation 2.5
Values 3.5 7
[69]
THLE DNMT3A
Mean 3.91
Standard deviation 0.33
Values 3.7 4.1
[70]
liver DNMT3A
Mean 5.72
Standard deviation 1.9
Values 7.1 6.3 6.5 3
[71]
ref_hepatocyte FOXO3
Mean 2.79
Standard deviation 0.38
Values 2.3 2.9 2.8 3.3 2.7
[72]
HepG2 FOXO3
Mean 8.44
Standard deviation 1
Values 9.2 7.7
[73]
HepG2.C3A FOXO3
Mean 8
Standard deviation 2.4
Values 6.3 9.7
[74]
HuH.7 FOXO3
Mean 11.9
Standard deviation 3.6
Values 7.9 15 13
[75]
SNU475 FOXO3
Mean 6.76
Standard deviation 0.76
Values 6.2 7.3
[76]
THLE FOXO3
Mean 17.9
Standard deviation 3.1
Values 16 20
[77]
liver FOXO3
Mean 20
Standard deviation 5.5
Values 23 21 24 12
[78]
ref_hepatocyte ZFX
Mean 2.63
Standard deviation 3.1
Values 1 1.3 0.99 8.2 1.6
[79]
HepG2 ZFX
Mean 5.54
Standard deviation 2.1
Values 7.1 4
[80]
HepG2.C3A ZFX
Mean 15
Standard deviation 0.69
Values 15 15
[81]
HuH.7 ZFX
Mean 16
Standard deviation 10
Values 9.3 28 11
[82]
SNU475 ZFX
Mean 23.3
Standard deviation 12
Values 15 32
[83]
THLE ZFX
Mean 22.3
Standard deviation 1.3
Values 21 23
[84]
liver ZFX
Mean 30.4
Standard deviation 15
Values 49 34 25 14
[85]
ref_hepatocyte EP300
Mean 2.46
Standard deviation 1.2
Values 4.4 1.8 1.4 3 1.8
[86]
HepG2 EP300
Mean 35.9
Standard deviation 5.7
Values 40 32
[87]
HepG2.C3A EP300
Mean 24.1
Standard deviation 1.4
Values 25 23
[88]
HuH.7 EP300
Mean 43
Standard deviation 15
Values 26 48 55
[89]
SNU475 EP300
Mean 26.9
Standard deviation 1.3
Values 26 28
[90]
THLE EP300
Mean 31.2
Standard deviation 11
Values 23 39
[91]
liver EP300
Mean 23.6
Standard deviation 8
Values 33 27 20 15
[92]
ref_hepatocyte DNMT3B
Mean 2.35
Standard deviation 2
Values 5 2 0.1 3.6 1.1
[93]
HepG2 DNMT3B
Mean 17.1
Standard deviation 1.1
Values 16 18
[94]
HepG2.C3A DNMT3B
Mean 8.62
Standard deviation 2.8
Values 11 6.6
[95]
HuH.7 DNMT3B
Mean 6.18
Standard deviation 2.5
Values 7.4 3.3 7.8
[96]
SNU475 DNMT3B
Mean 6.2
Standard deviation 1.4
Values 5.2 7.2
[97]
THLE DNMT3B
Mean 2.63
Standard deviation 0.35
Values 2.4 2.9
[98]
liver DNMT3B
Mean 0.855
Standard deviation 0.27
Values 0.93 0.77 0.54 1.2
[99]
ref_hepatocyte CREBBP
Mean 1.78
Standard deviation 0.69
Values 2.6 1.9 1.9 1.8 0.72
[100]
HepG2 CREBBP
Mean 29.3
Standard deviation 2.8
Values 31 27
[101]
HepG2.C3A CREBBP
Mean 15.2
Standard deviation 1
Values 14 16
[102]
HuH.7 CREBBP
Mean 22.2
Standard deviation 7.2
Values 14 24 28
[103]
SNU475 CREBBP
Mean 22.1
Standard deviation 0.2
Values 22 22
[104]
THLE CREBBP
Mean 24.9
Standard deviation 7.3
Values 20 30
[105]
liver CREBBP
Mean 23.8
Standard deviation 6
Values 28 21 30 17
[106]
ref_hepatocyte ETV6
Mean 1.23
Standard deviation 0.82
Values 1.6 1.3 2.4 0.7 0.22
[107]
HepG2 ETV6
Mean 3.42
Standard deviation 0.44
Values 3.1 3.7
[108]
HepG2.C3A ETV6
Mean 3.16
Standard deviation 0.23
Values 3 3.3
[109]
HuH.7 ETV6
Mean 3.34
Standard deviation 0.2
Values 3.3 3.6 3.2
[110]
SNU475 ETV6
Mean 7.17
Standard deviation 0.95
Values 7.8 6.5
[111]
THLE ETV6
Mean 6.06
Standard deviation 0.68
Values 6.5 5.6
[112]
liver ETV6
Mean 5.28
Standard deviation 1.4
Values 6.6 5.3 5.8 3.4
[113]
ref_hepatocyte ATM
Mean 0.969
Standard deviation 0.7
Values 0.27 1.1 0.7 2.1 0.69
[114]
HepG2 ATM
Mean 17.5
Standard deviation 8.3
Values 23 12
[115]
HepG2.C3A ATM
Mean 47.4
Standard deviation 4.5
Values 51 44
[116]
HuH.7 ATM
Mean 37.5
Standard deviation 9.1
Values 27 44 41
[117]
SNU475 ATM
Mean 31.7
Standard deviation 8.2
Values 26 38
[118]
THLE ATM
Mean 24.9
Standard deviation 4.4
Values 28 22
[119]
liver ATM
Mean 43.7
Standard deviation 31
Values 64 76 17 17
[120]
ref_hepatocyte GZMB
Mean 0.318
Standard deviation 0.4
Values 0.23 0.98 0 0 0.39
[121]
HepG2 GZMB
Mean 0.0286
Standard deviation 0.0081
Values 0.034 0.023
[122]
HepG2.C3A GZMB
Mean 0
Standard deviation 0
Values 0 0
[123]
HuH.7 GZMB
Mean 0
Standard deviation 0
Values 0 0 0
[124]
SNU475 GZMB
Mean 0
Standard deviation 0
Values 0 0
[125]
THLE GZMB
Mean 0
Standard deviation 0
Values 0 0
[126]
liver GZMB
Mean 0.276
Standard deviation 0.29
Values 0.026 0.029 0.59 0.46
[127]
ref_hepatocyte BCL2
Mean 0.0984
Standard deviation 0.087
Values 0.15 0.2 0.12 0.019 0
[128]
HepG2 BCL2
Mean 0.0301
Standard deviation 0.0061
Values 0.026 0.034
[129]
HepG2.C3A BCL2
Mean 1.13
Standard deviation 0.21
Values 0.99 1.3
[130]
HuH.7 BCL2
Mean 0.00642
Standard deviation 0.011
Values 0 0.019 0
[131]
SNU475 BCL2
Mean 0.618
Standard deviation 0.094
Values 0.68 0.55
[132]
THLE BCL2
Mean 0.568
Standard deviation 0.0088
Values 0.56 0.57
[133]
liver BCL2
Mean 1.31
Standard deviation 1
Values 2.5 1.8 0.49 0.49
[134]
ref_hepatocyte FLT3
Mean 0.0374
Standard deviation 0.084
Values 0 0.19 0 0 0
[135]
HepG2 FLT3
Mean 0
Standard deviation 0
Values 0 0
[136]
HepG2.C3A FLT3
Mean 0
Standard deviation 0
Values 0 0
[137]
HuH.7 FLT3
Mean 0.00625
Standard deviation 0.011
Values 0.019 0 0
[138]
SNU475 FLT3
Mean 0.00992
Standard deviation 0.0075
Values 0.015 0.0046
[139]
THLE FLT3
Mean 0
Standard deviation 0
Values 0 0
[140]
liver FLT3
Mean 0.402
Standard deviation 0.15
Values 0.57 0.44 0.21 0.39
[141]
ref_hepatocyte MIR1281
Missing
[142]
HepG2 MIR1281
Missing
[143]
HepG2.C3A MIR1281
Missing
[144]
HuH.7 MIR1281
Missing
[145]
SNU475 MIR1281
Missing
[146]
THLE MIR1281
Missing
[147]
liver MIR1281
Missing
[148]
ref_hepatocyte GABPB1-IT1
Missing
[149]
HepG2 GABPB1-IT1
Missing
[150]
HepG2.C3A GABPB1-IT1
Missing
[151]
HuH.7 GABPB1-IT1
Missing
[152]
SNU475 GABPB1-IT1
Missing
[153]
THLE GABPB1-IT1
Missing
[154]
liver GABPB1-IT1
Missing