WP_GENES_CONTROLLING_NEPHROGENESIS Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 ITGB1 Integrin beta-1 [1] -0.51[2] -0.56[3] -0.44[4] 0.16[5] 0.12[6] -0.64[7]
2 CTNNB1 Catenin beta-1 [8] 0.87[9] 0.30[10] 1.18[11] -0.55[12] -0.44[13] 0.31[14]
3 ILK Integrin-linked protein kinase [15] -1.55[16] -1.68[17] -1.76[18] -1.76[19] -2.77[20] -2.25[21]
4 VEGFA Vascular endothelial growth factor A [22] 0.47[23] 1.74[24] 0.33[25] -0.86[26] -0.28[27] -0.02[28]
5 CD2AP CD2-associated protein [29] -1.61[30] -0.39[31] -0.88[32] -0.25[33] -1.66[34] -1.21[35]
6 LAMB2 Laminin subunit beta-2 [36] 1.39[37] 1.00[38] -0.06[39] -0.41[40] 0.37[41] 1.30[42]
7 NCK1 Cytoplasmic protein NCK1 [43] -2.34[44] -2.31[45] -2.21[46] -1.87[47] -1.88[48] -1.27[49]
8 NOTCH2 Neurogenic locus notch homolog protein 2 [50] -0.61[51] -6.41[52] 1.05[53] 1.73[54] 2.40[55] 2.53[56]
9 NCK2 Cytoplasmic protein NCK2 [57] 0.05[58] -0.43[59] -2.03[60] -1.63[61] -1.01[62] -1.62[63]
10 ITGA3 Integrin alpha-3 [64] 1.21[65] -3.57[66] -4.56[67] 3.08[68] 2.65[69] -2.28[70]
11 HNF1B Hepatocyte nuclear factor 1-beta [71] -0.94[72] -3.31[73] 0.80[74] -2.15[75] -8.69[76] -0.60[77]
12 CXCR4 C-X-C chemokine receptor type 4 [78] -2.61[79] [80] -3.16[81] -6.86[82] -3.15[83] -0.86[84]
13 CD36 Platelet glycoprotein 4 [85] 0.59[86] -0.16[87] -5.25[88] 1.88[89] -7.24[90] 2.29[91]
14 FGFR2 Fibroblast growth factor receptor 2 [92] -3.25[93] -2.12[94] 1.81[95] 0.15[96] -4.81[97] 2.63[98]
15 SHH Sonic hedgehog protein [99] -0.36[100] -0.58[101] -0.52[102] -8.48[103] -8.75[104] -0.67[105]
16 CXCL12 Stromal cell-derived factor 1 [106] -7.33[107] -6.84[108] -6.31[109] 2.18[110] 3.75[111] 3.73[112]
17 PDGFB Platelet-derived growth factor subunit B [113] 2.31[114] 2.11[115] -0.72[116] -1.24[117] -1.79[118] -0.43[119]
18 RET Proto-oncogene tyrosine-protein kinase receptor Ret [120] -6.31[121] -7.66[122] [123] -7.27[124] -4.44[125] -0.20[126]
19 ETV4 ETS translocation variant 4 [127] 5.14[128] 5.88[129] 5.38[130] 0.57[131] 2.06[132] -2.36[133]
20 PDGFRB Platelet-derived growth factor receptor beta [134] 0.55[135] 0.88[136] -1.58[137] 0.55[138] 0.99[139] 2.62[140]
21 SIX1 Homeobox protein SIX1 [141] 1.67[142] 1.41[143] -0.16[144] 1.91[145] -2.81[146] -5.75[147]
22 KDR Vascular endothelial growth factor receptor 2 [148] -6.37[149] -8.09[150] -7.40[151] -3.04[152] 3.30[153] 5.50[154]
23 WNT4 Protein Wnt-4 [155] -4.43[156] -3.64[157] -4.76[158] -2.67[159] -4.11[160] -0.58[161]
24 FOXC1 Forkhead box protein C1 [162] 2.47[163] 0.26[164] 1.68[165] 2.05[166] 2.19[167] -1.25[168]
25 SLIT2 Slit homolog 2 protein [169] -1.99[170] -6.00[171] -1.01[172] 0.88[173] 0.22[174] 2.20[175]
26 NPHS1 Nephrin [176] 0.92[177] 0.26[178] -0.22[179] -0.67[180] -1.66[181] -1.68[182]
27 GDNF Glial cell line-derived neurotrophic factor [183] 4.21[184] 2.24[185] -3.62[186] -2.62[187] -0.83[188] -0.93[189]
28 LMX1B LIM homeobox transcription factor 1-beta [190] 0.45[191] 0.93[192] 2.76[193] -0.23[194] -0.61[195] -1.01[196]
29 EMX2 Homeobox protein EMX2 [197] [198] -3.72[199] [200] -2.91[201] -6.12[202] -1.30[203]
30 FGF8 Fibroblast growth factor 8 [204] -4.07[205] -3.79[206] 0.69[207] -3.22[208] [209] 1.90[210]
31 ITGA8 Integrin alpha-8 [211] [212] -3.65[213] -4.58[214] 2.53[215] [216] 3.66[217]
32 GLI3 Transcriptional activator GLI3 [218] -1.97[219] [220] -1.10[221] 7.63[222] 5.88[223] 3.35[224]
33 ROBO2 Roundabout homolog 2 [225] -3.13[226] [227] 7.37[228] -1.24[229] -1.04[230] 5.42[231]
34 FOXD1 Forkhead box protein D1 [232] [233] [234] [235] [236] [237] [238]
35 KIRREL1 Kin of IRRE-like protein 1 [239] [240] [241] [242] [243] [244] [245]
36 WT1 Wilms tumor protein [246] [247] [248] [249] [250] [251] [252]
37 EYA1 Eyes absent homolog 1 [253] [254] [255] [256] [257] [258] [259]
38 TCF21 Transcription factor 21 [260] [261] [262] [263] [264] [265] [266]
39 HOXA11 Homeobox protein Hox-A11 [267] [268] [269] [270] [271] [272] [273]
40 FOXC2 Forkhead box protein C2 [274] [275] [276] [277] [278] [279] [280]
41 HOXD11 Homeobox protein Hox-D11 [281] [282] [283] [284] [285] [286] [287]
42 NPHS2 Podocin [288] [289] [290] [291] [292] [293] [294]
43 LHX1 LIM/homeobox protein Lhx1 [295] [296] [297] [298] [299] [300] [301]
44 PAX2 Paired box protein Pax-2 [302] [303] [304] [305] [306] [307] [308]
[1]
ref_hepatocyte ITGB1
Mean 128
Standard deviation 1e+02
Values 1.4e+02 51 58 91 3e+02
[2]
HepG2 ITGB1
Mean 333
Standard deviation 10
Values 3.3e+02 3.4e+02
[3]
HepG2.C3A ITGB1
Mean 301
Standard deviation 47
Values 3.3e+02 2.7e+02
[4]
HuH.7 ITGB1
Mean 317
Standard deviation 16
Values 3e+02 3.3e+02 3.3e+02
[5]
SNU475 ITGB1
Mean 648
Standard deviation 88
Values 5.9e+02 7.1e+02
[6]
THLE ITGB1
Mean 768
Standard deviation 1.5e+02
Values 6.6e+02 8.8e+02
[7]
liver ITGB1
Mean 204
Standard deviation 85
Values 1.6e+02 3.2e+02 1.2e+02 2.1e+02
[8]
ref_hepatocyte CTNNB1
Mean 37.2
Standard deviation 16
Values 22 31 23 57 53
[9]
HepG2 CTNNB1
Mean 252
Standard deviation 27
Values 2.7e+02 2.3e+02
[10]
HepG2.C3A CTNNB1
Mean 158
Standard deviation 34
Values 1.8e+02 1.3e+02
[11]
HuH.7 CTNNB1
Mean 282
Standard deviation 64
Values 3.1e+02 2.1e+02 3.3e+02
[12]
SNU475 CTNNB1
Mean 115
Standard deviation 10
Values 1.1e+02 1.2e+02
[13]
THLE CTNNB1
Mean 151
Standard deviation 19
Values 1.4e+02 1.6e+02
[14]
liver CTNNB1
Mean 114
Standard deviation 15
Values 1.1e+02 1.3e+02 98 1.2e+02
[15]
ref_hepatocyte ILK
Mean 34.8
Standard deviation 22
Values 65 18 22 19 51
[16]
HepG2 ILK
Mean 44.1
Standard deviation 5.5
Values 48 40
[17]
HepG2.C3A ILK
Mean 37.7
Standard deviation 0.69
Values 37 38
[18]
HuH.7 ILK
Mean 34.3
Standard deviation 5.9
Values 40 29 34
[19]
SNU475 ILK
Mean 46.7
Standard deviation 5.1
Values 43 50
[20]
THLE ILK
Mean 28.3
Standard deviation 5.4
Values 24 32
[21]
liver ILK
Mean 18
Standard deviation 7.1
Values 13 12 20 27
[22]
ref_hepatocyte VEGFA
Mean 15.4
Standard deviation 8.3
Values 12 25 22 12 5.2
[23]
HepG2 VEGFA
Mean 78.9
Standard deviation 39
Values 51 1.1e+02
[24]
HepG2.C3A VEGFA
Mean 178
Standard deviation 91
Values 1.1e+02 2.4e+02
[25]
HuH.7 VEGFA
Mean 64.6
Standard deviation 7.4
Values 73 62 59
[26]
SNU475 VEGFA
Mean 38.2
Standard deviation 17
Values 50 26
[27]
THLE VEGFA
Mean 70.1
Standard deviation 17
Values 82 58
[28]
liver VEGFA
Mean 37.5
Standard deviation 27
Values 48 70 18 14
[29]
ref_hepatocyte CD2AP
Mean 14.1
Standard deviation 15
Values 11 4.3 2.2 14 39
[30]
HepG2 CD2AP
Mean 17.2
Standard deviation 4.9
Values 21 14
[31]
HepG2.C3A CD2AP
Mean 37.2
Standard deviation 11
Values 45 30
[32]
HuH.7 CD2AP
Mean 25.7
Standard deviation 4.3
Values 21 28 29
[33]
SNU475 CD2AP
Mean 53.7
Standard deviation 7.2
Values 49 59
[34]
THLE CD2AP
Mean 24.7
Standard deviation 3.4
Values 27 22
[35]
liver CD2AP
Mean 15.1
Standard deviation 3.8
Values 17 19 13 11
[36]
ref_hepatocyte LAMB2
Mean 12.5
Standard deviation 10
Values 2.4 9.5 14 29 7.1
[37]
HepG2 LAMB2
Mean 121
Standard deviation 15
Values 1.1e+02 1.3e+02
[38]
HepG2.C3A LAMB2
Mean 86.4
Standard deviation 49
Values 52 1.2e+02
[39]
HuH.7 LAMB2
Mean 40
Standard deviation 16
Values 31 59 30
[40]
SNU475 LAMB2
Mean 42.7
Standard deviation 10
Values 35 50
[41]
THLE LAMB2
Mean 89.1
Standard deviation 7.1
Values 84 94
[42]
liver LAMB2
Mean 75.8
Standard deviation 8.1
Values 73 69 88 73
[43]
ref_hepatocyte NCK1
Mean 11
Standard deviation 7.6
Values 13 7.3 6.3 4.9 23
[44]
HepG2 NCK1
Mean 8.05
Standard deviation 1.5
Values 9.1 7
[45]
HepG2.C3A NCK1
Mean 7.7
Standard deviation 1.8
Values 9 6.4
[46]
HuH.7 NCK1
Mean 7.97
Standard deviation 0.27
Values 8.2 7.9 7.7
[47]
SNU475 NCK1
Mean 13.7
Standard deviation 1.9
Values 12 15
[48]
THLE NCK1
Mean 16.6
Standard deviation 0.3
Values 16 17
[49]
liver NCK1
Mean 11.3
Standard deviation 2.9
Values 7.7 11 15 12
[50]
ref_hepatocyte NOTCH2
Mean 5.26
Standard deviation 4
Values 7.1 3.7 2.4 1.6 11
[51]
HepG2 NOTCH2
Mean 12.7
Standard deviation 3.4
Values 10 15
[52]
HepG2.C3A NOTCH2
Mean 0.213
Standard deviation 0.12
Values 0.3 0.13
[53]
HuH.7 NOTCH2
Mean 36.5
Standard deviation 12
Values 23 43 44
[54]
SNU475 NOTCH2
Mean 79.3
Standard deviation 13
Values 70 88
[55]
THLE NOTCH2
Mean 154
Standard deviation 35
Values 1.3e+02 1.8e+02
[56]
liver NOTCH2
Mean 74.9
Standard deviation 42
Values 99 1.2e+02 39 39
[57]
ref_hepatocyte NCK2
Mean 4.8
Standard deviation 3.5
Values 7 1 1.3 9.1 5.5
[58]
HepG2 NCK2
Mean 18.4
Standard deviation 3.6
Values 16 21
[59]
HepG2.C3A NCK2
Mean 12.3
Standard deviation 3.8
Values 9.6 15
[60]
HuH.7 NCK2
Mean 3.94
Standard deviation 0.32
Values 3.7 4.3 3.8
[61]
SNU475 NCK2
Mean 7.02
Standard deviation 0.0081
Values 7 7
[62]
THLE NCK2
Mean 13.2
Standard deviation 0.15
Values 13 13
[63]
liver NCK2
Mean 3.85
Standard deviation 2.3
Values 6.9 3.9 3.3 1.3
[64]
ref_hepatocyte ITGA3
Mean 3.01
Standard deviation 6.1
Values 0.81 0.13 0.21 0 14
[65]
HepG2 ITGA3
Mean 25.8
Standard deviation 7.7
Values 20 31
[66]
HepG2.C3A ITGA3
Mean 0.878
Standard deviation 0.34
Values 1.1 0.64
[67]
HuH.7 ITGA3
Mean 0.428
Standard deviation 0.18
Values 0.44 0.24 0.61
[68]
SNU475 ITGA3
Mean 116
Standard deviation 18
Values 1.3e+02 1e+02
[69]
THLE ITGA3
Mean 104
Standard deviation 35
Values 80 1.3e+02
[70]
liver ITGA3
Mean 1.53
Standard deviation 0.68
Values 2.3 1.9 0.94 0.98
[71]
ref_hepatocyte HNF1B
Mean 2.16
Standard deviation 1.2
Values 4.1 2 2.6 0.97 1.2
[72]
HepG2 HNF1B
Mean 4.18
Standard deviation 0.91
Values 4.8 3.5
[73]
HepG2.C3A HNF1B
Mean 0.755
Standard deviation 0.14
Values 0.65 0.86
[74]
HuH.7 HNF1B
Mean 12.5
Standard deviation 0.66
Values 12 13 13
[75]
SNU475 HNF1B
Mean 2.21
Standard deviation 1.2
Values 1.3 3.1
[76]
THLE HNF1B
Mean 0.029
Standard deviation 0.026
Values 0.047 0.011
[77]
liver HNF1B
Mean 3.51
Standard deviation 2.7
Values 1.3 1.2 6 5.6
[78]
ref_hepatocyte CXCR4
Mean 2.08
Standard deviation 2.5
Values 1.9 6.2 2.1 0.14 0
[79]
HepG2 CXCR4
Mean 1.26
Standard deviation 0.15
Values 1.4 1.2
[80]
HepG2.C3A CXCR4
Mean 0
Standard deviation 0
Values 0 0
[81]
HuH.7 CXCR4
Mean 0.781
Standard deviation 0.18
Values 0.92 0.84 0.58
[82]
SNU475 CXCR4
Mean 0.0809
Standard deviation 0.11
Values 0.16 0.0046
[83]
THLE CXCR4
Mean 1.29
Standard deviation 0.58
Values 1.7 0.88
[84]
liver CXCR4
Mean 2.82
Standard deviation 1.4
Values 1.5 2 4.6 3.1
[85]
ref_hepatocyte CD36
Mean 1.74
Standard deviation 1.4
Values 0.28 2.6 1.9 3.5 0.39
[86]
HepG2 CD36
Mean 9.69
Standard deviation 5.6
Values 14 5.8
[87]
HepG2.C3A CD36
Mean 5.39
Standard deviation 3.6
Values 8 2.8
[88]
HuH.7 CD36
Mean 0.152
Standard deviation 0.061
Values 0.14 0.22 0.098
[89]
SNU475 CD36
Mean 28.9
Standard deviation 5.9
Values 33 25
[90]
THLE CD36
Mean 0.0633
Standard deviation 0.044
Values 0.095 0.032
[91]
liver CD36
Mean 20.9
Standard deviation 5.9
Values 12 24 22 25
[92]
ref_hepatocyte FGFR2
Mean 1.34
Standard deviation 1.4
Values 0.084 3.2 2.4 0.47 0.46
[93]
HepG2 FGFR2
Mean 0.519
Standard deviation 0.3
Values 0.73 0.3
[94]
HepG2.C3A FGFR2
Mean 1.07
Standard deviation 0.3
Values 1.3 0.86
[95]
HuH.7 FGFR2
Mean 15.7
Standard deviation 0.71
Values 16 15 16
[96]
SNU475 FGFR2
Mean 6.74
Standard deviation 6.4
Values 2.2 11
[97]
THLE FGFR2
Mean 0.263
Standard deviation 0.0039
Values 0.27 0.26
[98]
liver FGFR2
Mean 20.4
Standard deviation 8
Values 32 19 18 13
[99]
ref_hepatocyte SHH
Mean 1.15
Standard deviation 1
Values 2.5 1.6 1.4 0.23 0
[100]
HepG2 SHH
Mean 3.31
Standard deviation 2.1
Values 1.8 4.8
[101]
HepG2.C3A SHH
Mean 2.66
Standard deviation 0.92
Values 2 3.3
[102]
HuH.7 SHH
Mean 2.69
Standard deviation 0.5
Values 2.3 3.3 2.5
[103]
SNU475 SHH
Mean 0.0146
Standard deviation 0.00091
Values 0.015 0.014
[104]
THLE SHH
Mean 0.0148
Standard deviation 0.021
Values 0.03 0
[105]
liver SHH
Mean 1.79
Standard deviation 2.1
Values 4.1 2.9 0.12 0
[106]
ref_hepatocyte CXCL12
Mean 0.84
Standard deviation 1.2
Values 0.2 2.7 1.3 0 0
[107]
HepG2 CXCL12
Mean 0.0193
Standard deviation 0.021
Values 0.0043 0.034
[108]
HepG2.C3A CXCL12
Mean 0.0253
Standard deviation 0.0055
Values 0.021 0.029
[109]
HuH.7 CXCL12
Mean 0.0355
Standard deviation 0.028
Values 0.0094 0.064 0.033
[110]
SNU475 CXCL12
Mean 17.3
Standard deviation 12
Values 8.6 26
[111]
THLE CXCL12
Mean 62.3
Standard deviation 29
Values 83 42
[112]
liver CXCL12
Mean 27.5
Standard deviation 16
Values 16 18 25 51
[113]
ref_hepatocyte PDGFB
Mean 0.738
Standard deviation 0.56
Values 1.3 0.54 0.23 0.25 1.4
[114]
HepG2 PDGFB
Mean 13.6
Standard deviation 5.2
Values 9.9 17
[115]
HepG2.C3A PDGFB
Mean 11
Standard deviation 4.6
Values 7.7 14
[116]
HuH.7 PDGFB
Mean 1.5
Standard deviation 0.44
Values 1.5 2 1.1
[117]
SNU475 PDGFB
Mean 1.42
Standard deviation 0.33
Values 1.2 1.7
[118]
THLE PDGFB
Mean 1.18
Standard deviation 0.022
Values 1.2 1.2
[119]
liver PDGFB
Mean 1.36
Standard deviation 0.68
Values 1.4 2 0.4 1.7
[120]
ref_hepatocyte RET
Mean 0.569
Standard deviation 0.57
Values 0.5 1.2 1.2 0 0.028
[121]
HepG2 RET
Mean 0.0265
Standard deviation 0.019
Values 0.013 0.04
[122]
HepG2.C3A RET
Mean 0.00972
Standard deviation 0.014
Values 0 0.019
[123]
HuH.7 RET
Mean 0
Standard deviation 0
Values 0 0 0
[124]
SNU475 RET
Mean 0.0167
Standard deviation 0.0092
Values 0.01 0.023
[125]
THLE RET
Mean 0.145
Standard deviation 0.062
Values 0.19 0.1
[126]
liver RET
Mean 1.22
Standard deviation 1.2
Values 0.4 2 0 2.4
[127]
ref_hepatocyte ETV4
Mean 0.55
Standard deviation 0.63
Values 1.4 0.24 0 1.1 0.052
[128]
HepG2 ETV4
Mean 71.5
Standard deviation 32
Values 49 94
[129]
HepG2.C3A ETV4
Mean 112
Standard deviation 30
Values 91 1.3e+02
[130]
HuH.7 ETV4
Mean 76.7
Standard deviation 34
Values 94 38 98
[131]
SNU475 ETV4
Mean 3.71
Standard deviation 4.3
Values 6.8 0.66
[132]
THLE ETV4
Mean 12.6
Standard deviation 1.6
Values 12 14
[133]
liver ETV4
Mean 0.265
Standard deviation 0.18
Values 0.19 0.071 0.49 0.31
[134]
ref_hepatocyte PDGFRB
Mean 0.484
Standard deviation 0.34
Values 0.58 0.51 0.98 0.12 0.23
[135]
HepG2 PDGFRB
Mean 2.63
Standard deviation 0.88
Values 3.3 2
[136]
HepG2.C3A PDGFRB
Mean 3.08
Standard deviation 0.099
Values 3.2 3
[137]
HuH.7 PDGFRB
Mean 0.54
Standard deviation 0.088
Values 0.44 0.57 0.61
[138]
SNU475 PDGFRB
Mean 3.21
Standard deviation 0.1
Values 3.3 3.1
[139]
THLE PDGFRB
Mean 5.3
Standard deviation 0.27
Values 5.1 5.5
[140]
liver PDGFRB
Mean 7.32
Standard deviation 2
Values 10 6.3 6.9 5.8
[141]
ref_hepatocyte SIX1
Mean 0.432
Standard deviation 0.97
Values 0 0 0 2.2 0
[142]
HepG2 SIX1
Mean 5.1
Standard deviation 0.98
Values 4.4 5.8
[143]
HepG2.C3A SIX1
Mean 3.98
Standard deviation 0.28
Values 4.2 3.8
[144]
HuH.7 SIX1
Mean 1.29
Standard deviation 0.28
Values 1.4 0.97 1.5
[145]
SNU475 SIX1
Mean 7.38
Standard deviation 0.73
Values 7.9 6.9
[146]
THLE SIX1
Mean 0.341
Standard deviation 0.21
Values 0.49 0.19
[147]
liver SIX1
Mean 0.0199
Standard deviation 0.04
Values 0.079 0 0 0
[148]
ref_hepatocyte KDR
Mean 0.384
Standard deviation 0.38
Values 0.38 0.98 0.47 0.021 0.075
[149]
HepG2 KDR
Mean 0.0172
Standard deviation 2.3e-05
Values 0.017 0.017
[150]
HepG2.C3A KDR
Mean 0.00486
Standard deviation 0.0069
Values 0 0.0097
[151]
HuH.7 KDR
Mean 0.00761
Standard deviation 0.0083
Values 0 0.0064 0.016
[152]
SNU475 KDR
Mean 0.211
Standard deviation 0.25
Values 0.39 0.037
[153]
THLE KDR
Mean 20.9
Standard deviation 3.6
Values 18 23
[154]
liver KDR
Mean 42.9
Standard deviation 25
Values 33 76 17 45
[155]
ref_hepatocyte WNT4
Mean 0.276
Standard deviation 0.47
Values 0.3 0 1.1 0 0
[156]
HepG2 WNT4
Mean 0.0472
Standard deviation 0.0061
Values 0.043 0.052
[157]
HepG2.C3A WNT4
Mean 0.0764
Standard deviation 0.0019
Values 0.075 0.078
[158]
HuH.7 WNT4
Mean 0.034
Standard deviation 0.022
Values 0.056 0.013 0.033
[159]
SNU475 WNT4
Mean 0.197
Standard deviation 0.1
Values 0.27 0.13
[160]
THLE WNT4
Mean 0.0881
Standard deviation 0.034
Values 0.11 0.064
[161]
liver WNT4
Mean 0.454
Standard deviation 0.67
Values 1.4 0.3 0.024 0.051
[162]
ref_hepatocyte FOXC1
Mean 0.155
Standard deviation 0.24
Values 0.13 0.065 0 0.58 0
[163]
HepG2 FOXC1
Mean 3.18
Standard deviation 1.3
Values 2.3 4.1
[164]
HepG2.C3A FOXC1
Mean 0.642
Standard deviation 0.12
Values 0.73 0.55
[165]
HuH.7 FOXC1
Mean 1.66
Standard deviation 0.62
Values 1.1 2.3 1.5
[166]
SNU475 FOXC1
Mean 2.91
Standard deviation 0.11
Values 3 2.8
[167]
THLE FOXC1
Mean 3.92
Standard deviation 0.0028
Values 3.9 3.9
[168]
liver FOXC1
Mean 0.161
Standard deviation 0.093
Values 0.29 0.086 0.16 0.1
[169]
ref_hepatocyte SLIT2
Mean 0.099
Standard deviation 0.14
Values 0.28 0 0 0 0.21
[170]
HepG2 SLIT2
Mean 0.0923
Standard deviation 0.04
Values 0.064 0.12
[171]
HepG2.C3A SLIT2
Mean 0.00536
Standard deviation 0.0076
Values 0.011 0
[172]
HuH.7 SLIT2
Mean 0.164
Standard deviation 0.11
Values 0.12 0.29 0.082
[173]
SNU475 SLIT2
Mean 0.824
Standard deviation 0.57
Values 1.2 0.42
[174]
THLE SLIT2
Mean 0.639
Standard deviation 0.075
Values 0.59 0.69
[175]
liver SLIT2
Mean 1.12
Standard deviation 0.57
Values 1.9 1.2 0.63 0.74
[176]
ref_hepatocyte NPHS1
Mean 0.0793
Standard deviation 0.084
Values 0.098 0.024 0.06 0.21 0
[177]
HepG2 NPHS1
Mean 0.556
Standard deviation 0.16
Values 0.44 0.67
[178]
HepG2.C3A NPHS1
Mean 0.328
Standard deviation 0.1
Values 0.26 0.4
[179]
HuH.7 NPHS1
Mean 0.227
Standard deviation 0.075
Values 0.19 0.31 0.18
[180]
SNU475 NPHS1
Mean 0.226
Standard deviation 0.047
Values 0.19 0.26
[181]
THLE NPHS1
Mean 0.139
Standard deviation 0.029
Values 0.12 0.16
[182]
liver NPHS1
Mean 0.0611
Standard deviation 0.077
Values 0.16 0.086 0 0
[183]
ref_hepatocyte GDNF
Mean 0.0784
Standard deviation 0.058
Values 0.054 0.041 0.043 0.18 0.075
[184]
HepG2 GDNF
Mean 5.37
Standard deviation 1.5
Values 4.3 6.4
[185]
HepG2.C3A GDNF
Mean 1.28
Standard deviation 0.43
Values 0.98 1.6
[186]
HuH.7 GDNF
Mean 0.0214
Standard deviation 0.037
Values 0 0.064 0
[187]
SNU475 GDNF
Mean 0.0579
Standard deviation 0.069
Values 0.11 0.0093
[188]
THLE GDNF
Mean 0.244
Standard deviation 0.074
Values 0.3 0.19
[189]
liver GDNF
Mean 0.102
Standard deviation 0.074
Values 0.21 0.071 0.047 0.077
[190]
ref_hepatocyte LMX1B
Mean 0.0639
Standard deviation 0.061
Values 0.15 0.041 0.1 0 0.026
[191]
HepG2 LMX1B
Mean 0.323
Standard deviation 0.11
Values 0.24 0.4
[192]
HepG2.C3A LMX1B
Mean 0.42
Standard deviation 0.23
Values 0.26 0.58
[193]
HuH.7 LMX1B
Mean 1.45
Standard deviation 0.23
Values 1.2 1.5 1.6
[194]
SNU475 LMX1B
Mean 0.246
Standard deviation 0.046
Values 0.28 0.21
[195]
THLE LMX1B
Mean 0.232
Standard deviation 0.057
Values 0.27 0.19
[196]
liver LMX1B
Mean 0.0785
Standard deviation 0.077
Values 0.15 0.14 0 0.026
[197]
ref_hepatocyte EMX2
Mean 0.0372
Standard deviation 0.051
Values 0.095 0 0 0 0.091
[198]
HepG2 EMX2
Mean 0
Standard deviation 0
Values 0 0
[199]
HepG2.C3A EMX2
Mean 0.00972
Standard deviation 0.014
Values 0 0.019
[200]
HuH.7 EMX2
Mean 0
Standard deviation 0
Values 0 0 0
[201]
SNU475 EMX2
Mean 0.0224
Standard deviation 0.019
Values 0.035 0.0093
[202]
THLE EMX2
Mean 0.00296
Standard deviation 0.0042
Values 0.0059 0
[203]
liver EMX2
Mean 0.0372
Standard deviation 0.05
Values 0.11 0.043 0 0
[204]
ref_hepatocyte FGF8
Mean 0.0195
Standard deviation 0.044
Values 0 0.098 0 0 0
[205]
HepG2 FGF8
Mean 0.00429
Standard deviation 0.0061
Values 0.0086 0
[206]
HepG2.C3A FGF8
Mean 0.00486
Standard deviation 0.0069
Values 0 0.0097
[207]
HuH.7 FGF8
Mean 0.105
Standard deviation 0.073
Values 0.075 0.051 0.19
[208]
SNU475 FGF8
Mean 0.00949
Standard deviation 0.0063
Values 0.0051 0.014
[209]
THLE FGF8
Mean 0
Standard deviation 0
Values 0 0
[210]
liver FGF8
Mean 0.18
Standard deviation 0.14
Values 0.25 0.34 0.047 0.077
[211]
ref_hepatocyte ITGA8
Mean 0.0195
Standard deviation 0.044
Values 0 0.098 0 0 0
[212]
HepG2 ITGA8
Mean 0
Standard deviation 0
Values 0 0
[213]
HepG2.C3A ITGA8
Mean 0.00536
Standard deviation 0.0076
Values 0.011 0
[214]
HuH.7 ITGA8
Mean 0.00273
Standard deviation 0.0047
Values 0 0 0.0082
[215]
SNU475 ITGA8
Mean 0.509
Standard deviation 0.09
Values 0.57 0.45
[216]
THLE ITGA8
Mean 0
Standard deviation 0
Values 0 0
[217]
liver ITGA8
Mean 0.607
Standard deviation 0.45
Values 1.1 0.78 0.071 0.46
[218]
ref_hepatocyte GLI3
Mean 0.0152
Standard deviation 0.021
Values 0.043 0.033 0 0 0
[219]
HepG2 GLI3
Mean 0.0143
Standard deviation 0.02
Values 0 0.029
[220]
HepG2.C3A GLI3
Mean 0
Standard deviation 0
Values 0 0
[221]
HuH.7 GLI3
Mean 0.0238
Standard deviation 0.021
Values 0 0.039 0.033
[222]
SNU475 GLI3
Mean 13.7
Standard deviation 1.2
Values 13 14
[223]
THLE GLI3
Mean 4.94
Standard deviation 1.2
Values 4.1 5.8
[224]
liver GLI3
Mean 0.384
Standard deviation 0.18
Values 0.42 0.37 0.59 0.15
[225]
ref_hepatocyte ROBO2
Mean 0.00507
Standard deviation 0.0077
Values 0 0.0081 0.017 0 0
[226]
HepG2 ROBO2
Mean 0.00214
Standard deviation 0.003
Values 0.0043 0
[227]
HepG2.C3A ROBO2
Mean 0
Standard deviation 0
Values 0 0
[228]
HuH.7 ROBO2
Mean 2.82
Standard deviation 2.7
Values 0.9 5.9 1.6
[229]
SNU475 ROBO2
Mean 0.00971
Standard deviation 0.00061
Values 0.01 0.0093
[230]
THLE ROBO2
Mean 0.0136
Standard deviation 0.011
Values 0.0059 0.021
[231]
liver ROBO2
Mean 0.537
Standard deviation 0.38
Values 0.99 0.7 0.33 0.13
[232]
ref_hepatocyte FOXD1
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[233]
HepG2 FOXD1
Mean 0.498
Standard deviation 0.12
Values 0.41 0.58
[234]
HepG2.C3A FOXD1
Mean 0.00536
Standard deviation 0.0076
Values 0.011 0
[235]
HuH.7 FOXD1
Mean 1.06
Standard deviation 0.21
Values 1.3 1 0.86
[236]
SNU475 FOXD1
Mean 7.48
Standard deviation 1.4
Values 8.5 6.5
[237]
THLE FOXD1
Mean 6.24
Standard deviation 0.19
Values 6.1 6.4
[238]
liver FOXD1
Mean 0.00944
Standard deviation 0.012
Values 0 0.014 0.024 0
[239]
ref_hepatocyte KIRREL1
Missing
[240]
HepG2 KIRREL1
Missing
[241]
HepG2.C3A KIRREL1
Missing
[242]
HuH.7 KIRREL1
Missing
[243]
SNU475 KIRREL1
Missing
[244]
THLE KIRREL1
Missing
[245]
liver KIRREL1
Missing
[246]
ref_hepatocyte WT1
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[247]
HepG2 WT1
Mean 0.593
Standard deviation 0.28
Values 0.39 0.79
[248]
HepG2.C3A WT1
Mean 3.91
Standard deviation 0.87
Values 4.5 3.3
[249]
HuH.7 WT1
Mean 0.00273
Standard deviation 0.0047
Values 0 0 0.0082
[250]
SNU475 WT1
Mean 0.247
Standard deviation 0.23
Values 0.41 0.083
[251]
THLE WT1
Mean 3.5
Standard deviation 1
Values 2.8 4.2
[252]
liver WT1
Mean 0.0592
Standard deviation 0.062
Values 0 0.014 0.094 0.13
[253]
ref_hepatocyte EYA1
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[254]
HepG2 EYA1
Mean 0.0086
Standard deviation 0.012
Values 0 0.017
[255]
HepG2.C3A EYA1
Mean 0.00486
Standard deviation 0.0069
Values 0 0.0097
[256]
HuH.7 EYA1
Mean 0
Standard deviation 0
Values 0 0 0
[257]
SNU475 EYA1
Mean 0.411
Standard deviation 0.13
Values 0.5 0.32
[258]
THLE EYA1
Mean 0.0225
Standard deviation 0.0017
Values 0.024 0.021
[259]
liver EYA1
Mean 0.265
Standard deviation 0.12
Values 0.21 0.37 0.12 0.36
[260]
ref_hepatocyte TCF21
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[261]
HepG2 TCF21
Mean 0
Standard deviation 0
Values 0 0
[262]
HepG2.C3A TCF21
Mean 0
Standard deviation 0
Values 0 0
[263]
HuH.7 TCF21
Mean 0
Standard deviation 0
Values 0 0 0
[264]
SNU475 TCF21
Mean 0.36
Standard deviation 0.37
Values 0.62 0.1
[265]
THLE TCF21
Mean 0
Standard deviation 0
Values 0 0
[266]
liver TCF21
Mean 0.906
Standard deviation 0.53
Values 0.53 0.37 1.4 1.3
[267]
ref_hepatocyte HOXA11
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[268]
HepG2 HOXA11
Mean 0.489
Standard deviation 0.32
Values 0.26 0.72
[269]
HepG2.C3A HOXA11
Mean 0.00972
Standard deviation 0.014
Values 0 0.019
[270]
HuH.7 HOXA11
Mean 3.68
Standard deviation 0.74
Values 4.3 2.9 3.8
[271]
SNU475 HOXA11
Mean 0.919
Standard deviation 0.26
Values 1.1 0.74
[272]
THLE HOXA11
Mean 0.218
Standard deviation 0.14
Values 0.31 0.12
[273]
liver HOXA11
Mean 0.00642
Standard deviation 0.013
Values 0 0 0 0.026
[274]
ref_hepatocyte FOXC2
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[275]
HepG2 FOXC2
Mean 0.00287
Standard deviation 0.0041
Values 0 0.0057
[276]
HepG2.C3A FOXC2
Mean 0.0146
Standard deviation 0.021
Values 0 0.029
[277]
HuH.7 FOXC2
Mean 0.0146
Standard deviation 0.02
Values 0.037 0.0064 0
[278]
SNU475 FOXC2
Mean 0.127
Standard deviation 0.11
Values 0.2 0.051
[279]
THLE FOXC2
Mean 1.47
Standard deviation 0.083
Values 1.4 1.5
[280]
liver FOXC2
Mean 0
Standard deviation 0
Values 0 0 0 0
[281]
ref_hepatocyte HOXD11
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[282]
HepG2 HOXD11
Mean 0.00501
Standard deviation 0.001
Values 0.0043 0.0057
[283]
HepG2.C3A HOXD11
Mean 0.0102
Standard deviation 0.00071
Values 0.011 0.0097
[284]
HuH.7 HOXD11
Mean 0.00428
Standard deviation 0.0074
Values 0 0.013 0
[285]
SNU475 HOXD11
Mean 6.86
Standard deviation 1.8
Values 5.6 8.2
[286]
THLE HOXD11
Mean 0.0136
Standard deviation 0.011
Values 0.0059 0.021
[287]
liver HOXD11
Mean 0
Standard deviation 0
Values 0 0 0 0
[288]
ref_hepatocyte NPHS2
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[289]
HepG2 NPHS2
Missing
[290]
HepG2.C3A NPHS2
Missing
[291]
HuH.7 NPHS2
Missing
[292]
SNU475 NPHS2
Missing
[293]
THLE NPHS2
Missing
[294]
liver NPHS2
Missing
[295]
ref_hepatocyte LHX1
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[296]
HepG2 LHX1
Mean 0.0938
Standard deviation 0.0052
Values 0.09 0.097
[297]
HepG2.C3A LHX1
Mean 0.0102
Standard deviation 0.00071
Values 0.011 0.0097
[298]
HuH.7 LHX1
Mean 0.134
Standard deviation 0.052
Values 0.094 0.19 0.11
[299]
SNU475 LHX1
Mean 0.623
Standard deviation 0.029
Values 0.64 0.6
[300]
THLE LHX1
Mean 0.00296
Standard deviation 0.0042
Values 0.0059 0
[301]
liver LHX1
Mean 0.0341
Standard deviation 0.04
Values 0.079 0.057 0 0
[302]
ref_hepatocyte PAX2
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[303]
HepG2 PAX2
Mean 0.0222
Standard deviation 0.025
Values 0.0043 0.04
[304]
HepG2.C3A PAX2
Mean 0
Standard deviation 0
Values 0 0
[305]
HuH.7 PAX2
Mean 0.0138
Standard deviation 0.017
Values 0.0094 0.032 0
[306]
SNU475 PAX2
Mean 0.00232
Standard deviation 0.0033
Values 0 0.0046
[307]
THLE PAX2
Mean 0
Standard deviation 0
Values 0 0
[308]
liver PAX2
Mean 0.00642
Standard deviation 0.013
Values 0 0 0 0.026