WP_DNA_MISMATCH_REPAIR Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 PCNA Proliferating cell nuclear antigen [1] 0.90[2] 0.59[3] -0.96[4] -0.53[5] -0.24[6] -2.37[7]
2 POLD2 DNA polymerase delta subunit 2 [8] -0.59[9] -0.71[10] -0.33[11] -1.18[12] -0.80[13] 0.58[14]
3 POLD4 DNA polymerase delta subunit 4 [15] -2.12[16] -2.76[17] -0.81[18] 1.13[19] -2.45[20] 0.22[21]
4 POLE3 DNA polymerase epsilon subunit 3 [22] -0.77[23] -1.21[24] -1.05[25] -1.37[26] -0.33[27] -0.87[28]
5 POLE4 DNA polymerase epsilon subunit 4 [29] -1.04[30] -0.59[31] -4.18[32] -1.94[33] -2.40[34] -1.10[35]
6 RPA2 Replication protein A 32 kDa subunit [36] -1.45[37] -1.67[38] -1.24[39] -1.05[40] -0.97[41] -1.70[42]
7 RFC4 Replication factor C subunit 4 [43] -0.96[44] -0.62[45] -0.18[46] -1.28[47] 0.06[48] -2.05[49]
8 MSH6 DNA mismatch repair protein Msh6 [50] 0.32[51] 0.52[52] 0.59[53] 0.59[54] 1.01[55] 0.99[56]
9 RFC1 Replication factor C subunit 1 [57] 0.15[58] 1.15[59] 1.40[60] 0.01[61] 0.86[62] 1.48[63]
10 RFC2 Replication factor C subunit 2 [64] -0.25[65] -0.69[66] -0.78[67] -0.13[68] 0.33[69] -0.07[70]
11 RPA1 Replication protein A 70 kDa DNA-binding subunit [71] 1.32[72] 0.76[73] 0.91[74] 1.54[75] 1.56[76] 0.70[77]
12 RPA3 Replication protein A 14 kDa subunit [78] -0.36[79] 0.15[80] 0.74[81] -1.22[82] -0.93[83] 0.01[84]
13 MLH1 DNA mismatch repair protein Mlh1 [85] 0.86[86] 0.69[87] 1.30[88] -0.17[89] 0.49[90] 1.13[91]
14 RFC5 Replication factor C subunit 5 [92] 0.14[93] 0.31[94] 0.37[95] -0.04[96] 0.49[97] -0.18[98]
15 PMS2 Mismatch repair endonuclease PMS2 [99] -1.40[100] -1.96[101] -1.19[102] -0.90[103] -1.21[104] -0.71[105]
16 MSH2 DNA mismatch repair protein Msh2 [106] 0.83[107] 1.83[108] 1.14[109] 1.82[110] 1.19[111] 0.01[112]
17 RFC3 Replication factor C subunit 3 [113] 1.18[114] 1.76[115] 1.76[116] 0.94[117] 1.54[118] -0.17[119]
18 LIG1 DNA ligase 1 [120] 1.64[121] 1.37[122] 1.87[123] 0.20[124] 0.95[125] 0.33[126]
19 POLD1 DNA polymerase delta catalytic subunit [127] 1.87[128] 1.80[129] 2.49[130] 1.51[131] 2.28[132] 1.37[133]
20 POLD3 DNA polymerase delta subunit 3 [134] 1.18[135] 0.76[136] 1.60[137] 1.80[138] 2.30[139] 1.69[140]
21 POLE DNA polymerase epsilon catalytic subunit A [141] 3.05[142] 3.38[143] 3.30[144] 2.43[145] 3.44[146] 3.64[147]
22 POLE2 DNA polymerase epsilon subunit 2 [148] 0.71[149] 1.22[150] 2.07[151] 0.84[152] 1.39[153] -0.46[154]
23 EXO1 Exonuclease 1 [155] 1.91[156] 1.91[157] 2.94[158] 3.47[159] 2.75[160] -0.77[161]
[1]
ref_hepatocyte PCNA
Mean 36
Standard deviation 33
Values 14 17 19 92 37
[2]
HepG2 PCNA
Mean 147
Standard deviation 54
Values 1.9e+02 1.1e+02
[3]
HepG2.C3A PCNA
Mean 130
Standard deviation 86
Values 1.9e+02 69
[4]
HuH.7 PCNA
Mean 46.8
Standard deviation 33
Values 76 10 53
[5]
SNU475 PCNA
Mean 56.8
Standard deviation 7.7
Values 62 51
[6]
THLE PCNA
Mean 77.4
Standard deviation 13
Values 68 86
[7]
liver PCNA
Mean 6.07
Standard deviation 2.5
Values 3 5.2 7.3 8.8
[8]
ref_hepatocyte POLD2
Mean 32.3
Standard deviation 18
Values 30 40 58 10 23
[9]
HepG2 POLD2
Mean 47
Standard deviation 5.6
Values 43 51
[10]
HepG2.C3A POLD2
Mean 47.2
Standard deviation 5.4
Values 51 43
[11]
HuH.7 POLD2
Mean 64.5
Standard deviation 25
Values 79 36 79
[12]
SNU475 POLD2
Mean 32.5
Standard deviation 4.3
Values 35 29
[13]
THLE POLD2
Mean 47.1
Standard deviation 7.9
Values 41 53
[14]
liver POLD2
Mean 42.1
Standard deviation 24
Values 23 21 67 57
[15]
ref_hepatocyte POLD4
Mean 31.5
Standard deviation 27
Values 19 57 64 1.6 16
[16]
HepG2 POLD4
Mean 15.9
Standard deviation 3.9
Values 13 19
[17]
HepG2.C3A POLD4
Mean 11.1
Standard deviation 4
Values 8.3 14
[18]
HuH.7 POLD4
Mean 45.1
Standard deviation 6.1
Values 46 51 39
[19]
SNU475 POLD4
Mean 157
Standard deviation 53
Values 1.2e+02 1.9e+02
[20]
THLE POLD4
Mean 14.6
Standard deviation 1.8
Values 13 16
[21]
liver POLD4
Mean 32.1
Standard deviation 32
Values 5.3 6 48 69
[22]
ref_hepatocyte POLE3
Mean 29.6
Standard deviation 21
Values 36 11 15 23 62
[23]
HepG2 POLE3
Mean 37.9
Standard deviation 13
Values 47 29
[24]
HepG2.C3A POLE3
Mean 30.6
Standard deviation 16
Values 42 19
[25]
HuH.7 POLE3
Mean 36
Standard deviation 15
Values 48 20 40
[26]
SNU475 POLE3
Mean 26.1
Standard deviation 0.99
Values 27 25
[27]
THLE POLE3
Mean 60
Standard deviation 7.2
Values 55 65
[28]
liver POLE3
Mean 14.1
Standard deviation 6.6
Values 7.8 11 15 23
[29]
ref_hepatocyte POLE4
Mean 27.1
Standard deviation 15
Values 9.6 38 45 28 15
[30]
HepG2 POLE4
Mean 28.9
Standard deviation 4.6
Values 32 26
[31]
HepG2.C3A POLE4
Mean 43
Standard deviation 18
Values 56 30
[32]
HuH.7 POLE4
Mean 3.76
Standard deviation 1.5
Values 5.3 2.3 3.8
[33]
SNU475 POLE4
Mean 16.1
Standard deviation 1
Values 15 17
[34]
THLE POLE4
Mean 13
Standard deviation 1.2
Values 12 14
[35]
liver POLE4
Mean 11
Standard deviation 11
Values 1.1 1.7 24 18
[36]
ref_hepatocyte RPA2
Mean 23.6
Standard deviation 12
Values 28 11 15 23 41
[37]
HepG2 RPA2
Mean 19
Standard deviation 3.9
Values 22 16
[38]
HepG2.C3A RPA2
Mean 17.8
Standard deviation 8.2
Values 24 12
[39]
HuH.7 RPA2
Mean 25.2
Standard deviation 11
Values 35 14 27
[40]
SNU475 RPA2
Mean 25.9
Standard deviation 7.9
Values 31 20
[41]
THLE RPA2
Mean 30.6
Standard deviation 2.7
Values 29 33
[42]
liver RPA2
Mean 6.36
Standard deviation 3.6
Values 3.2 4.2 6.9 11
[43]
ref_hepatocyte RFC4
Mean 11
Standard deviation 7.9
Values 9.8 2.4 4.7 17 21
[44]
HepG2 RFC4
Mean 12.4
Standard deviation 2.7
Values 14 10
[45]
HepG2.C3A RFC4
Mean 17
Standard deviation 7.7
Values 22 12
[46]
HuH.7 RFC4
Mean 24.4
Standard deviation 12
Values 35 12 26
[47]
SNU475 RFC4
Mean 10.3
Standard deviation 3.5
Values 13 7.8
[48]
THLE RFC4
Mean 29.1
Standard deviation 0.079
Values 29 29
[49]
liver RFC4
Mean 2.31
Standard deviation 1.2
Values 1 1.9 2.3 4
[50]
ref_hepatocyte MSH6
Mean 10.9
Standard deviation 9.5
Values 4.3 3.6 4.4 23 19
[51]
HepG2 MSH6
Mean 30
Standard deviation 7.4
Values 35 25
[52]
HepG2.C3A MSH6
Mean 37.5
Standard deviation 7.9
Values 43 32
[53]
HuH.7 MSH6
Mean 41.5
Standard deviation 12
Values 47 28 50
[54]
SNU475 MSH6
Mean 37.5
Standard deviation 5.6
Values 41 34
[55]
THLE MSH6
Mean 56
Standard deviation 3.5
Values 54 59
[56]
liver MSH6
Mean 19
Standard deviation 6.7
Values 20 28 11 17
[57]
ref_hepatocyte RFC1
Mean 9.26
Standard deviation 5.4
Values 7.1 5 4.1 15 15
[58]
HepG2 RFC1
Mean 22.5
Standard deviation 11
Values 30 15
[59]
HepG2.C3A RFC1
Mean 49.1
Standard deviation 4.6
Values 52 46
[60]
HuH.7 RFC1
Mean 61.4
Standard deviation 8.8
Values 51 67 66
[61]
SNU475 RFC1
Mean 21.2
Standard deviation 2
Values 23 20
[62]
THLE RFC1
Mean 42.7
Standard deviation 3.9
Values 45 40
[63]
liver RFC1
Mean 22.6
Standard deviation 3.4
Values 23 26 24 18
[64]
ref_hepatocyte RFC2
Mean 8.95
Standard deviation 3.2
Values 6.2 6.5 11 7.3 13
[65]
HepG2 RFC2
Mean 16.5
Standard deviation 2.8
Values 18 14
[66]
HepG2.C3A RFC2
Mean 13.3
Standard deviation 5.7
Values 17 9.3
[67]
HuH.7 RFC2
Mean 13.1
Standard deviation 6.2
Values 18 6.1 15
[68]
SNU475 RFC2
Mean 18.6
Standard deviation 4.4
Values 22 16
[69]
THLE RFC2
Mean 28.7
Standard deviation 3.4
Values 26 31
[70]
liver RFC2
Mean 7.44
Standard deviation 4.1
Values 3.1 4.9 10 11
[71]
ref_hepatocyte RPA1
Mean 8.25
Standard deviation 3.9
Values 5.5 6.7 5.3 9.2 15
[72]
HepG2 RPA1
Mean 45.3
Standard deviation 8.3
Values 51 39
[73]
HepG2.C3A RPA1
Mean 33.6
Standard deviation 11
Values 41 26
[74]
HuH.7 RPA1
Mean 39
Standard deviation 14
Values 48 23 47
[75]
SNU475 RPA1
Mean 54.6
Standard deviation 1
Values 54 55
[76]
THLE RPA1
Mean 62.1
Standard deviation 11
Values 54 70
[77]
liver RPA1
Mean 11.7
Standard deviation 1.8
Values 9.5 12 12 14
[78]
ref_hepatocyte RPA3
Mean 8.22
Standard deviation 4.8
Values 1.9 15 11 6.2 7.6
[79]
HepG2 RPA3
Mean 14.1
Standard deviation 4
Values 17 11
[80]
HepG2.C3A RPA3
Mean 21.8
Standard deviation 13
Values 31 13
[81]
HuH.7 RPA3
Mean 34.5
Standard deviation 16
Values 50 18 35
[82]
SNU475 RPA3
Mean 8.05
Standard deviation 1.5
Values 7 9.1
[83]
THLE RPA3
Mean 11
Standard deviation 2.9
Values 8.9 13
[84]
liver RPA3
Mean 7.22
Standard deviation 6.1
Values 1.4 2.4 13 12
[85]
ref_hepatocyte MLH1
Mean 6.5
Standard deviation 1.5
Values 5.5 7.5 8.4 4.7 6.4
[86]
HepG2 MLH1
Mean 25.9
Standard deviation 4.9
Values 29 22
[87]
HepG2.C3A MLH1
Mean 25.1
Standard deviation 3.7
Values 28 22
[88]
HuH.7 MLH1
Mean 40.4
Standard deviation 11
Values 50 28 44
[89]
SNU475 MLH1
Mean 13.2
Standard deviation 0.12
Values 13 13
[90]
THLE MLH1
Mean 23.2
Standard deviation 4.4
Values 20 26
[91]
liver MLH1
Mean 12.4
Standard deviation 3.5
Values 9.1 13 11 17
[92]
ref_hepatocyte RFC5
Mean 5.54
Standard deviation 4.9
Values 0.42 3.2 3.6 13 7.4
[93]
HepG2 RFC5
Mean 13.4
Standard deviation 5.4
Values 17 9.6
[94]
HepG2.C3A RFC5
Mean 16.4
Standard deviation 10
Values 24 9
[95]
HuH.7 RFC5
Mean 18.1
Standard deviation 6.8
Values 21 10 23
[96]
SNU475 RFC5
Mean 12.2
Standard deviation 2.4
Values 14 11
[97]
THLE RFC5
Mean 19.8
Standard deviation 2.4
Values 18 22
[98]
liver RFC5
Mean 4.29
Standard deviation 1.7
Values 2.5 3.5 4.9 6.3
[99]
ref_hepatocyte PMS2
Mean 5.16
Standard deviation 1.2
Values 4.6 5.7 4.7 3.8 6.9
[100]
HepG2 PMS2
Mean 4.28
Standard deviation 0.47
Values 4.6 3.9
[101]
HepG2.C3A PMS2
Mean 3.16
Standard deviation 0.96
Values 3.8 2.5
[102]
HuH.7 PMS2
Mean 5.68
Standard deviation 1.5
Values 4.9 4.7 7.4
[103]
SNU475 PMS2
Mean 6.27
Standard deviation 0.36
Values 6 6.5
[104]
THLE PMS2
Mean 5.67
Standard deviation 0.91
Values 5 6.3
[105]
liver PMS2
Mean 2.75
Standard deviation 0.94
Values 2.5 4.1 1.8 2.6
[106]
ref_hepatocyte MSH2
Mean 3.98
Standard deviation 3.2
Values 2.4 1.5 1.3 8.5 6.1
[107]
HepG2 MSH2
Mean 15.5
Standard deviation 8
Values 21 9.9
[108]
HepG2.C3A MSH2
Mean 33.8
Standard deviation 15
Values 45 23
[109]
HuH.7 MSH2
Mean 22.1
Standard deviation 10
Values 28 10 28
[110]
SNU475 MSH2
Mean 32
Standard deviation 6.8
Values 37 27
[111]
THLE MSH2
Mean 23.1
Standard deviation 1.9
Values 22 24
[112]
liver MSH2
Mean 3.5
Standard deviation 1.1
Values 2.9 4.8 2.3 4
[113]
ref_hepatocyte RFC3
Mean 3.17
Standard deviation 3.1
Values 1.4 1.1 0.35 6.3 6.7
[114]
HepG2 RFC3
Mean 15.8
Standard deviation 7.8
Values 21 10
[115]
HepG2.C3A RFC3
Mean 25.6
Standard deviation 17
Values 37 14
[116]
HuH.7 RFC3
Mean 27.1
Standard deviation 12
Values 33 14 35
[117]
SNU475 RFC3
Mean 13.8
Standard deviation 3.5
Values 16 11
[118]
THLE RFC3
Mean 23.5
Standard deviation 5.4
Values 20 27
[119]
liver RFC3
Mean 2.46
Standard deviation 0.85
Values 1.5 2.9 2 3.4
[120]
ref_hepatocyte LIG1
Mean 3.08
Standard deviation 2.7
Values 0.82 1.3 2.1 7.4 3.8
[121]
HepG2 LIG1
Mean 21.1
Standard deviation 4.6
Values 24 18
[122]
HepG2.C3A LIG1
Mean 19
Standard deviation 5
Values 23 15
[123]
HuH.7 LIG1
Mean 28.4
Standard deviation 13
Values 37 13 35
[124]
SNU475 LIG1
Mean 8.05
Standard deviation 0.33
Values 7.8 8.3
[125]
THLE LIG1
Mean 15.1
Standard deviation 4
Values 12 18
[126]
liver LIG1
Mean 3.39
Standard deviation 0.66
Values 2.7 3.3 3.3 4.3
[127]
ref_hepatocyte POLD1
Mean 2.41
Standard deviation 0.8
Values 2.7 1.4 2.4 2 3.5
[128]
HepG2 POLD1
Mean 19.3
Standard deviation 1.9
Values 18 21
[129]
HepG2.C3A POLD1
Mean 20.1
Standard deviation 2.3
Values 22 18
[130]
HuH.7 POLD1
Mean 34
Standard deviation 15
Values 44 16 42
[131]
SNU475 POLD1
Mean 15.6
Standard deviation 2.9
Values 18 14
[132]
THLE POLD1
Mean 29.7
Standard deviation 2.6
Values 28 32
[133]
liver POLD1
Mean 5.43
Standard deviation 0.68
Values 5.1 4.7 6.2 5.8
[134]
ref_hepatocyte POLD3
Mean 1.46
Standard deviation 0.56
Values 1 0.71 1.8 1.9 1.9
[135]
HepG2 POLD3
Mean 7.29
Standard deviation 0.95
Values 8 6.6
[136]
HepG2.C3A POLD3
Mean 5.94
Standard deviation 4
Values 8.8 3.1
[137]
HuH.7 POLD3
Mean 11.2
Standard deviation 6.1
Values 14 4.1 15
[138]
SNU475 POLD3
Mean 11.6
Standard deviation 3.7
Values 14 9
[139]
THLE POLD3
Mean 18.3
Standard deviation 1.6
Values 17 19
[140]
liver POLD3
Mean 4.11
Standard deviation 1.1
Values 3 4.3 3.6 5.6
[141]
ref_hepatocyte POLE
Mean 1.41
Standard deviation 0.61
Values 0.68 2.2 1.5 1.7 0.95
[142]
HepG2 POLE
Mean 25.6
Standard deviation 5.9
Values 30 22
[143]
HepG2.C3A POLE
Mean 35.2
Standard deviation 15
Values 46 24
[144]
HuH.7 POLE
Mean 35.1
Standard deviation 18
Values 40 15 50
[145]
SNU475 POLE
Mean 17.2
Standard deviation 0.14
Values 17 17
[146]
THLE POLE
Mean 39
Standard deviation 5
Values 35 43
[147]
liver POLE
Mean 15.3
Standard deviation 8.7
Values 25 19 11 6
[148]
ref_hepatocyte POLE2
Mean 1.24
Standard deviation 0.85
Values 0.24 0.46 1.6 1.7 2.2
[149]
HepG2 POLE2
Mean 4.44
Standard deviation 2.1
Values 5.9 3
[150]
HepG2.C3A POLE2
Mean 6.88
Standard deviation 5.4
Values 11 3.1
[151]
HuH.7 POLE2
Mean 13.1
Standard deviation 7.8
Values 20 4.4 15
[152]
SNU475 POLE2
Mean 5.05
Standard deviation 2
Values 6.4 3.6
[153]
THLE POLE2
Mean 8.23
Standard deviation 0.9
Values 7.6 8.9
[154]
liver POLE2
Mean 0.788
Standard deviation 0.23
Values 0.53 1 0.68 0.9
[155]
ref_hepatocyte EXO1
Mean 0.669
Standard deviation 0.56
Values 0.19 0.12 0.53 1.1 1.4
[156]
HepG2 EXO1
Mean 5.53
Standard deviation 3.6
Values 8 3
[157]
HepG2.C3A EXO1
Mean 6
Standard deviation 4.2
Values 8.9 3.1
[158]
HuH.7 EXO1
Mean 13
Standard deviation 8
Values 17 3.7 18
[159]
SNU475 EXO1
Mean 16.8
Standard deviation 6.9
Values 22 12
[160]
THLE EXO1
Mean 11.5
Standard deviation 1.2
Values 11 12
[161]
liver EXO1
Mean 0.343
Standard deviation 0.28
Values 0.053 0.73 0.28 0.31