WP_DNA_IRDAMAGE_AND_CELLULAR_RESPONSE_VIA_ATR Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 UBE2D3 Ubiquitin-conjugating enzyme E2 D3 [1] -1.70[2] -1.67[3] -1.68[4] -1.77[5] -1.51[6] -0.47[7]
2 XRCC5 X-ray repair cross-complementing protein 5 [8] 0.19[9] 0.01[10] -0.37[11] -0.21[12] -0.20[13] -0.19[14]
3 PARP1 Poly [ADP-ribose] polymerase 1 [15] -0.74[16] -1.28[17] -0.80[18] -0.50[19] -1.20[20] -0.74[21]
4 PCNA Proliferating cell nuclear antigen [22] 0.02[23] -0.29[24] -1.95[25] -1.25[26] -1.18[27] -3.41[28]
5 TRIM28 Transcription intermediary factor 1-beta [29] 0.59[30] 0.07[31] 0.84[32] -0.01[33] -0.50[34] -1.01[35]
6 RPA2 Replication protein A 32 kDa subunit [36] -2.33[37] -2.55[38] -2.24[39] -1.77[40] -1.91[41] -2.73[42]
7 IKBKG NF-kappa-B essential modulator [43] -1.76[44] -1.90[45] -4.41[46] -1.88[47] -3.31[48] -0.94[49]
8 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 [50] -2.13[51] -1.57[52] -3.12[53] -3.56[54] -3.58[55] -3.00[56]
9 CDK2 Cyclin-dependent kinase 2 [57] -1.28[58] -1.41[59] -1.29[60] -1.05[61] -0.68[62] -2.52[63]
10 POLB DNA polymerase beta [64] -1.80[65] -2.05[66] -2.25[67] -3.32[68] -3.34[69] -1.83[70]
11 UPF1 Regulator of nonsense transcripts 1 [71] 0.85[72] 0.36[73] 0.87[74] -0.24[75] 0.20[76] 0.19[77]
12 FEN1 Flap endonuclease 1 [78] 0.16[79] -0.34[80] 0.26[81] -0.35[82] 0.33[83] -1.43[84]
13 RPA1 Replication protein A 70 kDa DNA-binding subunit [85] 0.44[86] -0.11[87] -0.09[88] 0.82[89] 0.62[90] -0.33[91]
14 BCL6 B-cell lymphoma 6 protein [92] -1.77[93] 0.19[94] -1.58[95] -1.57[96] -1.05[97] -0.30[98]
15 RAD17 Cell cycle checkpoint protein RAD17 [99] -1.72[100] -0.92[101] -1.13[102] -1.37[103] -1.24[104] -0.76[105]
16 XPA DNA repair protein complementing XP-A cells [106] -3.20[107] -2.62[108] -3.20[109] -2.95[110] -3.00[111] -1.02[112]
17 MLH1 DNA mismatch repair protein Mlh1 [113] -0.02[114] -0.19[115] 0.30[116] -0.89[117] -0.45[118] 0.09[119]
18 MDM2 E3 ubiquitin-protein ligase Mdm2 [120] 1.24[121] 2.37[122] -0.65[123] -0.52[124] 0.14[125] 1.83[126]
19 NBN Nibrin [127] -1.29[128] -0.40[129] -0.90[130] 0.47[131] -0.62[132] 0.94[133]
20 CDK1 Cyclin-dependent kinase 1 [134] 0.38[135] 2.15[136] 0.63[137] 1.24[138] 1.84[139] -2.80[140]
21 CHEK2 Serine/threonine-protein kinase Chk2 [141] -0.77[142] -0.62[143] -0.47[144] -1.28[145] -1.87[146] -3.61[147]
22 RECQL ATP-dependent DNA helicase Q1 [148] -1.69[149] -0.91[150] -0.78[151] -0.46[152] -0.05[153] -0.38[154]
23 TP53 Cellular tumor antigen p53 [155] 0.77[156] 0.04[157] 0.54[158] 0.26[159] -0.29[160] -0.37[161]
24 SMARCC2 SWI/SNF complex subunit SMARCC2 [162] 0.36[163] 0.01[164] 0.24[165] 1.08[166] 0.81[167] 1.13[168]
25 UIMC1 BRCA1-A complex subunit RAP80 [169] -0.50[170] -0.56[171] -0.37[172] -0.96[173] -1.02[174] -0.63[175]
26 BRCC3 Lys-63-specific deubiquitinase BRCC36 [176] -1.34[177] -0.69[178] -1.65[179] -1.26[180] -1.31[181] 0.10[182]
27 PLK1 Serine/threonine-protein kinase PLK1 [183] 1.62[184] 1.07[185] 0.68[186] 0.22[187] 1.04[188] -2.96[189]
28 USP1 Ubiquitin carboxyl-terminal hydrolase 1 [190] -0.34[191] 0.77[192] 0.63[193] 0.74[194] 0.89[195] 0.00[196]
29 RAD51 DNA repair protein RAD51 homolog 1 [197] -1.12[198] -1.60[199] -1.75[200] -1.21[201] -1.46[202] -4.28[203]
30 SMC1A Structural maintenance of chromosomes protein 1A [204] 1.23[205] 0.80[206] 1.56[207] 1.99[208] 2.61[209] 2.11[210]
31 CLK2 Dual specificity protein kinase CLK2 [211] -1.16[212] -0.64[213] -0.01[214] -0.45[215] -0.91[216] -0.56[217]
32 MCM2 DNA replication licensing factor MCM2 [218] 2.05[219] 1.21[220] 2.25[221] 1.10[222] 1.89[223] -1.95[224]
33 MSH2 DNA mismatch repair protein Msh2 [225] -0.05[226] 0.95[227] 0.14[228] 1.10[229] 0.25[230] -1.02[231]
34 RAD50 DNA repair protein RAD50 [232] -0.72[233] 1.12[234] 0.02[235] 0.24[236] 0.51[237] 1.87[238]
35 PML Protein PML [239] -0.64[240] -1.94[241] -0.49[242] 0.86[243] 0.13[244] -0.09[245]
36 RBBP8 DNA endonuclease RBBP8 [246] -0.68[247] 0.45[248] -1.18[249] 0.41[250] 0.39[251] -0.09[252]
37 SP1 Transcription factor Sp1 [253] 0.95[254] 0.90[255] 1.71[256] 1.64[257] 1.11[258] 1.82[259]
38 TOPBP1 DNA topoisomerase 2-binding protein 1 [260] 0.15[261] 0.89[262] 0.80[263] 1.10[264] 1.29[265] 0.55[266]
39 PRKDC DNA-dependent protein kinase catalytic subunit [267] 3.34[268] 2.52[269] 4.15[270] 3.86[271] 3.73[272] 3.91[273]
40 HUS1 Checkpoint protein HUS1 [274] -1.59[275] -1.60[276] -1.32[277] -1.14[278] -1.55[279] 1.04[280]
41 RFWD3 E3 ubiquitin-protein ligase RFWD3 [281] 1.74[282] 1.34[283] 1.25[284] 1.59[285] 1.66[286] 0.39[287]
42 PPM1D Protein phosphatase 1D [288] 0.38[289] 0.33[290] -0.72[291] -1.52[292] -0.67[293] -0.23[294]
43 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 0.41[295] 0.21[296] -0.04[297] 0.15[298] -0.49[299] -0.55[300]
44 RECQL5 ATP-dependent DNA helicase Q5 [301] 0.39[302] 0.46[303] -0.17[304] -0.13[305] -0.53[306] 0.59[307]
45 CDC45 Cell division control protein 45 homolog [308] 0.33[309] -0.01[310] 0.40[311] 0.23[312] 0.35[313] -3.24[314]
46 E2F1 Transcription factor E2F1 [315] 1.07[316] 0.64[317] 0.51[318] 0.84[319] 1.06[320] -3.95[321]
47 CHEK1 Serine/threonine-protein kinase Chk1 [322] 0.66[323] 0.74[324] 0.05[325] 1.12[326] 1.13[327] -2.36[328]
48 MCPH1 Microcephalin [329] 0.02[330] 0.31[331] 0.52[332] -1.61[333] -0.77[334] 0.80[335]
49 FANCA Fanconi anemia group A protein [336] 0.79[337] 1.18[338] 0.64[339] 0.28[340] 0.41[341] -0.69[342]
50 MDC1 Mediator of DNA damage checkpoint protein 1 [343] 1.62[344] 1.73[345] 1.81[346] 1.86[347] 1.57[348] 1.12[349]
51 TOP3A DNA topoisomerase 3-alpha [350] 1.09[351] 0.48[352] 0.52[353] 0.82[354] 0.99[355] 1.46[356]
52 RAD1 Cell cycle checkpoint protein RAD1 [357] 0.49[358] 0.88[359] 1.16[360] 0.77[361] 1.45[362] 0.57[363]
53 PALB2 Partner and localizer of BRCA2 [364] 0.89[365] 0.90[366] 0.28[367] -0.33[368] -0.05[369] 0.34[370]
54 RAD9A Cell cycle checkpoint control protein RAD9A [371] -0.80[372] -0.81[373] 0.75[374] 1.30[375] -1.09[376] -0.51[377]
55 BRCA1 Breast cancer type 1 susceptibility protein [378] 0.80[379] 1.76[380] 1.89[381] 1.12[382] 1.42[383] 1.34[384]
56 FANCI Fanconi anemia group I protein [385] 1.56[386] 1.71[387] 1.95[388] 2.31[389] 2.40[390] -0.50[391]
57 HERC2 E3 ubiquitin-protein ligase HERC2 [392] 1.59[393] 0.99[394] 1.29[395] 2.06[396] 1.91[397] 3.83[398]
58 DCLRE1A DNA cross-link repair 1A protein [399] -0.11[400] 1.55[401] 0.91[402] 0.12[403] 0.26[404] 1.31[405]
59 ATRIP ATR-interacting protein [406] -0.63[407] -0.67[408] -0.05[409] -1.37[410] -0.51[411] -0.50[412]
60 TDP1 Tyrosyl-DNA phosphodiesterase 1 [413] 0.71[414] 0.53[415] 0.02[416] 0.87[417] 0.20[418] 0.08[419]
61 ATR Serine/threonine-protein kinase ATR [420] 0.22[421] 0.93[422] 0.76[423] 1.50[424] 1.25[425] 3.22[426]
62 TP53BP1 TP53-binding protein 1 [427] 1.71[428] 0.93[429] 1.64[430] 2.91[431] 2.14[432] 1.95[433]
63 CEP164 Centrosomal protein of 164 kDa [434] 1.25[435] 1.01[436] 0.52[437] 1.41[438] 0.87[439] 1.02[440]
64 FOXM1 Forkhead box protein M1 [441] 2.35[442] 1.96[443] 2.50[444] 1.88[445] 3.18[446] -0.95[447]
65 WRN Werner syndrome ATP-dependent helicase [448] -0.26[449] 0.91[450] 2.59[451] 0.67[452] 0.27[453] 1.64[454]
66 RAD52 DNA repair protein RAD52 homolog [455] -0.49[456] -0.02[457] -0.16[458] -1.44[459] -1.21[460] 0.42[461]
67 CLSPN Claspin [462] 0.49[463] 0.63[464] 0.65[465] 1.72[466] 1.89[467] -1.47[468]
68 RMI1 RecQ-mediated genome instability protein 1 [469] -0.29[470] 0.66[471] 0.85[472] 1.05[473] 1.68[474] 0.65[475]
69 FANCD2 Fanconi anemia group D2 protein [476] 1.56[477] 1.42[478] 2.23[479] 1.39[480] 1.86[481] -0.31[482]
70 ATM Serine-protein kinase ATM [483] 2.16[484] 3.47[485] 2.94[486] 3.13[487] 2.39[488] 4.65[489]
71 CDC25C M-phase inducer phosphatase 3 [490] 1.06[491] 1.93[492] 1.70[493] 0.90[494] 1.53[495] -1.75[496]
72 EXO1 Exonuclease 1 [497] 1.03[498] 1.03[499] 1.94[500] 2.75[501] 1.81[502] -1.80[503]
73 BRIP1 Fanconi anemia group J protein [504] 1.27[505] 2.38[506] 2.14[507] 2.18[508] 2.00[509] 1.63[510]
74 BARD1 BRCA1-associated RING domain protein 1 [511] 0.44[512] 1.14[513] 0.91[514] 1.67[515] 1.53[516] 1.54[517]
75 BRCA2 Breast cancer type 2 susceptibility protein [518] 1.93[519] 4.13[520] 4.05[521] 3.44[522] 3.38[523] 3.10[524]
76 POLN DNA polymerase nu [525] -1.84[526] -0.11[527] 1.92[528] 1.68[529] 0.64[530] 2.46[531]
77 ABRAXAS1 BRCA1-A complex subunit Abraxas 1 [532] [533] [534] [535] [536] [537] [538]
78 H2AX [539] [540] [541] [542] [543] [544] [545]
79 MIR4741 [546] [547] [548] [549] [550] [551] [552]
80 MRE11 Double-strand break repair protein MRE11 [553] [554] [555] [556] [557] [558] [559]
81 SEM1 Putative protein SEM1, isoform 2 [560] [561] [562] [563] [564] [565] [566]
[1]
ref_hepatocyte UBE2D3
Mean 65.1
Standard deviation 16
Values 79 72 77 40 57
[2]
HepG2 UBE2D3
Mean 81.2
Standard deviation 7.1
Values 86 76
[3]
HepG2.C3A UBE2D3
Mean 90.2
Standard deviation 5
Values 94 87
[4]
HuH.7 UBE2D3
Mean 102
Standard deviation 3.4
Values 1e+02 1.1e+02 99
[5]
SNU475 UBE2D3
Mean 71.5
Standard deviation 4.7
Values 68 75
[6]
THLE UBE2D3
Mean 111
Standard deviation 12
Values 1e+02 1.2e+02
[7]
liver UBE2D3
Mean 83.8
Standard deviation 35
Values 51 56 1.1e+02 1.1e+02
[8]
ref_hepatocyte XRCC5
Mean 49.2
Standard deviation 25
Values 28 31 35 80 72
[9]
HepG2 XRCC5
Mean 227
Standard deviation 47
Values 2.6e+02 1.9e+02
[10]
HepG2.C3A XRCC5
Mean 218
Standard deviation 87
Values 2.8e+02 1.6e+02
[11]
HuH.7 XRCC5
Mean 192
Standard deviation 57
Values 2.1e+02 1.3e+02 2.4e+02
[12]
SNU475 XRCC5
Mean 160
Standard deviation 1.4
Values 1.6e+02 1.6e+02
[13]
THLE XRCC5
Mean 209
Standard deviation 38
Values 1.8e+02 2.4e+02
[14]
liver XRCC5
Mean 77.5
Standard deviation 10
Values 63 81 78 87
[15]
ref_hepatocyte PARP1
Mean 36.6
Standard deviation 31
Values 33 16 17 26 91
[16]
HepG2 PARP1
Mean 88.3
Standard deviation 6.6
Values 93 84
[17]
HepG2.C3A PARP1
Mean 66.3
Standard deviation 14
Values 76 56
[18]
HuH.7 PARP1
Mean 106
Standard deviation 38
Values 1.3e+02 62 1.3e+02
[19]
SNU475 PARP1
Mean 96.8
Standard deviation 5.2
Values 93 1e+02
[20]
THLE PARP1
Mean 77.5
Standard deviation 13
Values 68 87
[21]
liver PARP1
Mean 39.1
Standard deviation 10
Values 31 44 31 51
[22]
ref_hepatocyte PCNA
Mean 36
Standard deviation 33
Values 14 17 19 92 37
[23]
HepG2 PCNA
Mean 147
Standard deviation 54
Values 1.9e+02 1.1e+02
[24]
HepG2.C3A PCNA
Mean 130
Standard deviation 86
Values 1.9e+02 69
[25]
HuH.7 PCNA
Mean 46.8
Standard deviation 33
Values 76 10 53
[26]
SNU475 PCNA
Mean 56.8
Standard deviation 7.7
Values 62 51
[27]
THLE PCNA
Mean 77.4
Standard deviation 13
Values 68 86
[28]
liver PCNA
Mean 6.07
Standard deviation 2.5
Values 3 5.2 7.3 8.8
[29]
ref_hepatocyte TRIM28
Mean 25.2
Standard deviation 4.8
Values 33 22 27 23 21
[30]
HepG2 TRIM28
Mean 153
Standard deviation 9.6
Values 1.5e+02 1.6e+02
[31]
HepG2.C3A TRIM28
Mean 116
Standard deviation 8.6
Values 1.1e+02 1.2e+02
[32]
HuH.7 TRIM28
Mean 227
Standard deviation 52
Values 2.4e+02 1.7e+02 2.7e+02
[33]
SNU475 TRIM28
Mean 93.4
Standard deviation 12
Values 1e+02 85
[34]
THLE TRIM28
Mean 86.9
Standard deviation 21
Values 72 1e+02
[35]
liver TRIM28
Mean 22.4
Standard deviation 6.3
Values 30 23 22 15
[36]
ref_hepatocyte RPA2
Mean 23.6
Standard deviation 12
Values 28 11 15 23 41
[37]
HepG2 RPA2
Mean 19
Standard deviation 3.9
Values 22 16
[38]
HepG2.C3A RPA2
Mean 17.8
Standard deviation 8.2
Values 24 12
[39]
HuH.7 RPA2
Mean 25.2
Standard deviation 11
Values 35 14 27
[40]
SNU475 RPA2
Mean 25.9
Standard deviation 7.9
Values 31 20
[41]
THLE RPA2
Mean 30.6
Standard deviation 2.7
Values 29 33
[42]
liver RPA2
Mean 6.36
Standard deviation 3.6
Values 3.2 4.2 6.9 11
[43]
ref_hepatocyte IKBKG
Mean 22.7
Standard deviation 14
Values 37 10 24 7.4 36
[44]
HepG2 IKBKG
Mean 27.1
Standard deviation 5.7
Values 23 31
[45]
HepG2.C3A IKBKG
Mean 26.7
Standard deviation 4
Values 24 30
[46]
HuH.7 IKBKG
Mean 5.4
Standard deviation 1.3
Values 6.7 4.1 5.4
[47]
SNU475 IKBKG
Mean 23.2
Standard deviation 3.5
Values 26 21
[48]
THLE IKBKG
Mean 11.2
Standard deviation 1
Values 10 12
[49]
liver IKBKG
Mean 21.3
Standard deviation 6.6
Values 13 22 20 29
[50]
ref_hepatocyte EEF1E1
Mean 14.5
Standard deviation 5.8
Values 12 5.5 20 19 16
[51]
HepG2 EEF1E1
Mean 13.3
Standard deviation 1.4
Values 14 12
[52]
HepG2.C3A EEF1E1
Mean 21.4
Standard deviation 7.4
Values 27 16
[53]
HuH.7 EEF1E1
Mean 8.4
Standard deviation 2.5
Values 11 5.7 8.9
[54]
SNU475 EEF1E1
Mean 4.6
Standard deviation 0.13
Values 4.7 4.5
[55]
THLE EEF1E1
Mean 5.91
Standard deviation 0.31
Values 5.7 6.1
[56]
liver EEF1E1
Mean 3.22
Standard deviation 2.9
Values 0.7 0.8 6.2 5.2
[57]
ref_hepatocyte CDK2
Mean 12.1
Standard deviation 11
Values 3.3 4.6 5.7 19 28
[58]
HepG2 CDK2
Mean 20
Standard deviation 3.4
Values 22 18
[59]
HepG2.C3A CDK2
Mean 20
Standard deviation 9.1
Values 26 14
[60]
HuH.7 CDK2
Mean 24.9
Standard deviation 12
Values 33 11 30
[61]
SNU475 CDK2
Mean 21.8
Standard deviation 2.6
Values 24 20
[62]
THLE CDK2
Mean 36.9
Standard deviation 5.3
Values 33 41
[63]
liver CDK2
Mean 3.76
Standard deviation 1.3
Values 3.2 2.3 4.4 5.2
[64]
ref_hepatocyte POLB
Mean 10.8
Standard deviation 1.8
Values 12 11 8.8 9.3 13
[65]
HepG2 POLB
Mean 12.5
Standard deviation 2.5
Values 14 11
[66]
HepG2.C3A POLB
Mean 11.5
Standard deviation 2.8
Values 13 9.5
[67]
HuH.7 POLB
Mean 11.5
Standard deviation 2.4
Values 14 10 10
[68]
SNU475 POLB
Mean 4.06
Standard deviation 0.015
Values 4.1 4.1
[69]
THLE POLB
Mean 5.21
Standard deviation 0.74
Values 5.7 4.7
[70]
liver POLB
Mean 5.42
Standard deviation 4
Values 1.5 2.8 7.1 10
[71]
ref_hepatocyte UPF1
Mean 9.8
Standard deviation 3.4
Values 15 8.6 9.5 9.3 6.2
[72]
HepG2 UPF1
Mean 71.2
Standard deviation 1.7
Values 70 72
[73]
HepG2.C3A UPF1
Mean 55.4
Standard deviation 6.6
Values 51 60
[74]
HuH.7 UPF1
Mean 90.2
Standard deviation 6
Values 88 86 97
[75]
SNU475 UPF1
Mean 31.2
Standard deviation 0.71
Values 31 32
[76]
THLE UPF1
Mean 55.1
Standard deviation 9.1
Values 49 61
[77]
liver UPF1
Mean 20
Standard deviation 16
Values 39 28 8.4 5.3
[78]
ref_hepatocyte FEN1
Mean 8.88
Standard deviation 4.9
Values 7.8 3.4 7 17 9.6
[79]
HepG2 FEN1
Mean 40
Standard deviation 13
Values 49 31
[80]
HepG2.C3A FEN1
Mean 30.8
Standard deviation 20
Values 45 17
[81]
HuH.7 FEN1
Mean 53.6
Standard deviation 31
Values 79 19 63
[82]
SNU475 FEN1
Mean 26.1
Standard deviation 5.2
Values 30 22
[83]
THLE FEN1
Mean 54.6
Standard deviation 11
Values 47 62
[84]
liver FEN1
Mean 5.91
Standard deviation 2.9
Values 4.1 5.8 3.7 10
[85]
ref_hepatocyte RPA1
Mean 8.25
Standard deviation 3.9
Values 5.5 6.7 5.3 9.2 15
[86]
HepG2 RPA1
Mean 45.3
Standard deviation 8.3
Values 51 39
[87]
HepG2.C3A RPA1
Mean 33.6
Standard deviation 11
Values 41 26
[88]
HuH.7 RPA1
Mean 39
Standard deviation 14
Values 48 23 47
[89]
SNU475 RPA1
Mean 54.6
Standard deviation 1
Values 54 55
[90]
THLE RPA1
Mean 62.1
Standard deviation 11
Values 54 70
[91]
liver RPA1
Mean 11.7
Standard deviation 1.8
Values 9.5 12 12 14
[92]
ref_hepatocyte BCL6
Mean 7.16
Standard deviation 3.9
Values 4.6 7.3 10 12 2
[93]
HepG2 BCL6
Mean 8.5
Standard deviation 0.79
Values 7.9 9.1
[94]
HepG2.C3A BCL6
Mean 36
Standard deviation 26
Values 17 55
[95]
HuH.7 BCL6
Mean 12
Standard deviation 6.8
Values 8.1 20 8.1
[96]
SNU475 BCL6
Mean 9.02
Standard deviation 1.2
Values 9.9 8.2
[97]
THLE BCL6
Mean 16.9
Standard deviation 0.91
Values 18 16
[98]
liver BCL6
Mean 10.4
Standard deviation 5.1
Values 17 11 7.1 6.1
[99]
ref_hepatocyte RAD17
Mean 6.99
Standard deviation 4.4
Values 4.2 4.4 2.8 11 12
[100]
HepG2 RAD17
Mean 8.57
Standard deviation 1.3
Values 9.5 7.6
[101]
HepG2.C3A RAD17
Mean 16.3
Standard deviation 1.9
Values 18 15
[102]
HuH.7 RAD17
Mean 16.1
Standard deviation 0.43
Values 17 16 16
[103]
SNU475 RAD17
Mean 10.1
Standard deviation 0.83
Values 9.5 11
[104]
THLE RAD17
Mean 14.5
Standard deviation 1.9
Values 16 13
[105]
liver RAD17
Mean 7.36
Standard deviation 2.5
Values 4.4 6.1 9.1 9.8
[106]
ref_hepatocyte XPA
Mean 6.81
Standard deviation 3.3
Values 3.1 6 6 12 6.7
[107]
HepG2 XPA
Mean 2.99
Standard deviation 0.21
Values 2.8 3.1
[108]
HepG2.C3A XPA
Mean 4.88
Standard deviation 0.4
Values 4.6 5.2
[109]
HuH.7 XPA
Mean 3.72
Standard deviation 0.4
Values 4.2 3.6 3.4
[110]
SNU475 XPA
Mean 3.29
Standard deviation 0.7
Values 2.8 3.8
[111]
THLE XPA
Mean 4.15
Standard deviation 0.26
Values 4.3 4
[112]
liver XPA
Mean 6.02
Standard deviation 4.3
Values 2.1 2.7 11 8.3
[113]
ref_hepatocyte MLH1
Mean 6.5
Standard deviation 1.5
Values 5.5 7.5 8.4 4.7 6.4
[114]
HepG2 MLH1
Mean 25.9
Standard deviation 4.9
Values 29 22
[115]
HepG2.C3A MLH1
Mean 25.1
Standard deviation 3.7
Values 28 22
[116]
HuH.7 MLH1
Mean 40.4
Standard deviation 11
Values 50 28 44
[117]
SNU475 MLH1
Mean 13.2
Standard deviation 0.12
Values 13 13
[118]
THLE MLH1
Mean 23.2
Standard deviation 4.4
Values 20 26
[119]
liver MLH1
Mean 12.4
Standard deviation 3.5
Values 9.1 13 11 17
[120]
ref_hepatocyte MDM2
Mean 6.36
Standard deviation 2.9
Values 5 4.8 3.6 11 7.6
[121]
HepG2 MDM2
Mean 60.6
Standard deviation 13
Values 70 51
[122]
HepG2.C3A MDM2
Mean 145
Standard deviation 52
Values 1.8e+02 1.1e+02
[123]
HuH.7 MDM2
Mean 20.4
Standard deviation 0.31
Values 20 20 21
[124]
SNU475 MDM2
Mean 16.7
Standard deviation 1.8
Values 15 18
[125]
THLE MDM2
Mean 34.2
Standard deviation 0.86
Values 35 34
[126]
liver MDM2
Mean 40.5
Standard deviation 11
Values 45 54 29 35
[127]
ref_hepatocyte NBN
Mean 5.99
Standard deviation 3.6
Values 3.9 4.3 2.7 7.6 11
[128]
HepG2 NBN
Mean 9.9
Standard deviation 6.3
Values 14 5.4
[129]
HepG2.C3A NBN
Mean 20
Standard deviation 9.1
Values 26 14
[130]
HuH.7 NBN
Mean 16.2
Standard deviation 4.2
Values 17 12 20
[131]
SNU475 NBN
Mean 31.2
Standard deviation 0.96
Values 32 30
[132]
THLE NBN
Mean 19
Standard deviation 0.88
Values 20 18
[133]
liver NBN
Mean 20.5
Standard deviation 4.2
Values 16 24 19 24
[134]
ref_hepatocyte CDK1
Mean 5.78
Standard deviation 6.9
Values 0.06 0.72 1.6 13 14
[135]
HepG2 CDK1
Mean 30.4
Standard deviation 14
Values 40 21
[136]
HepG2.C3A CDK1
Mean 113
Standard deviation 85
Values 1.7e+02 53
[137]
HuH.7 CDK1
Mean 45.1
Standard deviation 21
Values 60 21 55
[138]
SNU475 CDK1
Mean 51.1
Standard deviation 5
Values 55 48
[139]
THLE CDK1
Mean 101
Standard deviation 11
Values 93 1.1e+02
[140]
liver CDK1
Mean 1.48
Standard deviation 1.4
Values 0.013 1.4 1 3.4
[141]
ref_hepatocyte CHEK2
Mean 5.74
Standard deviation 6.1
Values 4.2 1.1 1.7 16 5.5
[142]
HepG2 CHEK2
Mean 13.6
Standard deviation 0.16
Values 14 13
[143]
HepG2.C3A CHEK2
Mean 16.4
Standard deviation 6.4
Values 21 12
[144]
HuH.7 CHEK2
Mean 20.8
Standard deviation 7.6
Values 28 13 22
[145]
SNU475 CHEK2
Mean 8.87
Standard deviation 0.55
Values 9.3 8.5
[146]
THLE CHEK2
Mean 7.68
Standard deviation 1.3
Values 6.8 8.6
[147]
liver CHEK2
Mean 0.84
Standard deviation 0.33
Values 0.4 0.88 0.87 1.2
[148]
ref_hepatocyte RECQL
Mean 5.42
Standard deviation 4.7
Values 3 1.4 2.7 7.2 13
[149]
HepG2 RECQL
Mean 6.79
Standard deviation 3.5
Values 9.3 4.3
[150]
HepG2.C3A RECQL
Mean 12.7
Standard deviation 8.9
Values 19 6.4
[151]
HuH.7 RECQL
Mean 15.9
Standard deviation 3.3
Values 16 13 19
[152]
SNU475 RECQL
Mean 14.8
Standard deviation 0.64
Values 15 14
[153]
THLE RECQL
Mean 25.6
Standard deviation 1.3
Values 25 26
[154]
liver RECQL
Mean 7.45
Standard deviation 2.3
Values 6 10 5.1 8.2
[155]
ref_hepatocyte TP53
Mean 5.28
Standard deviation 0.94
Values 6.2 5.5 5.5 5.5 3.7
[156]
HepG2 TP53
Mean 36.3
Standard deviation 0.12
Values 36 36
[157]
HepG2.C3A TP53
Mean 23.9
Standard deviation 1.8
Values 25 23
[158]
HuH.7 TP53
Mean 38.7
Standard deviation 16
Values 46 20 50
[159]
SNU475 TP53
Mean 23.7
Standard deviation 6.7
Values 19 28
[160]
THLE TP53
Mean 21.1
Standard deviation 6.6
Values 16 26
[161]
liver TP53
Mean 7.29
Standard deviation 2.3
Values 5.6 5 9 9.5
[162]
ref_hepatocyte SMARCC2
Mean 5.24
Standard deviation 1.7
Values 5.3 3.2 3.9 6.8 7
[163]
HepG2 SMARCC2
Mean 27.2
Standard deviation 3.2
Values 25 29
[164]
HepG2.C3A SMARCC2
Mean 23.2
Standard deviation 1
Values 22 24
[165]
HuH.7 SMARCC2
Mean 31.2
Standard deviation 7
Values 32 24 38
[166]
SNU475 SMARCC2
Mean 41.6
Standard deviation 7.9
Values 36 47
[167]
THLE SMARCC2
Mean 44.8
Standard deviation 6.1
Values 40 49
[168]
liver SMARCC2
Mean 20.5
Standard deviation 8.3
Values 15 13 32 22
[169]
ref_hepatocyte UIMC1
Mean 5.15
Standard deviation 4.3
Values 13 2 3.3 3.4 4.5
[170]
HepG2 UIMC1
Mean 14.7
Standard deviation 0.61
Values 15 14
[171]
HepG2.C3A UIMC1
Mean 15.4
Standard deviation 0.39
Values 15 16
[172]
HuH.7 UIMC1
Mean 20.1
Standard deviation 1.6
Values 22 19 19
[173]
SNU475 UIMC1
Mean 9.94
Standard deviation 0.92
Values 11 9.3
[174]
THLE UIMC1
Mean 12.4
Standard deviation 0.38
Values 12 13
[175]
liver UIMC1
Mean 5.96
Standard deviation 1.3
Values 6 7.7 4.6 5.5
[176]
ref_hepatocyte BRCC3
Mean 5.02
Standard deviation 2.2
Values 3.1 4 3.2 7.3 7.5
[177]
HepG2 BRCC3
Mean 8.01
Standard deviation 4.4
Values 11 4.9
[178]
HepG2.C3A BRCC3
Mean 13.7
Standard deviation 6.4
Values 18 9.1
[179]
HuH.7 BRCC3
Mean 8.03
Standard deviation 1.6
Values 8.3 6.3 9.4
[180]
SNU475 BRCC3
Mean 7.86
Standard deviation 0.18
Values 8 7.7
[181]
THLE BRCC3
Mean 9.91
Standard deviation 0.42
Values 10 9.6
[182]
liver BRCC3
Mean 9.64
Standard deviation 3.8
Values 5.2 7.8 12 13
[183]
ref_hepatocyte PLK1
Mean 4.92
Standard deviation 5.9
Values 0.65 0.48 1.1 13 9.1
[184]
HepG2 PLK1
Mean 61.1
Standard deviation 5.4
Values 65 57
[185]
HepG2.C3A PLK1
Mean 45.5
Standard deviation 17
Values 58 33
[186]
HuH.7 PLK1
Mean 39.6
Standard deviation 20
Values 47 17 55
[187]
SNU475 PLK1
Mean 21.4
Standard deviation 1.4
Values 22 20
[188]
THLE PLK1
Mean 49.2
Standard deviation 23
Values 33 65
[189]
liver PLK1
Mean 1.13
Standard deviation 1.1
Values 0.093 0.53 1.2 2.7
[190]
ref_hepatocyte USP1
Mean 4.86
Standard deviation 3.9
Values 2.6 2.4 2.1 11 5.8
[191]
HepG2 USP1
Mean 15.6
Standard deviation 8.3
Values 21 9.7
[192]
HepG2.C3A USP1
Mean 36.5
Standard deviation 17
Values 48 25
[193]
HuH.7 USP1
Mean 38
Standard deviation 11
Values 42 26 46
[194]
SNU475 USP1
Mean 30.5
Standard deviation 6.2
Values 35 26
[195]
THLE USP1
Mean 44
Standard deviation 2.6
Values 46 42
[196]
liver USP1
Mean 8.7
Standard deviation 1.6
Values 6.5 9.6 10 8.4
[197]
ref_hepatocyte RAD51
Mean 4.73
Standard deviation 7.4
Values 0.36 0.24 0.2 17 5.6
[198]
HepG2 RAD51
Mean 8.76
Standard deviation 0.7
Values 9.3 8.3
[199]
HepG2.C3A RAD51
Mean 6.88
Standard deviation 3.6
Values 9.4 4.3
[200]
HuH.7 RAD51
Mean 7.06
Standard deviation 4.4
Values 10 2 8.8
[201]
SNU475 RAD51
Mean 7.64
Standard deviation 1.6
Values 8.8 6.5
[202]
THLE RAD51
Mean 8.38
Standard deviation 1.2
Values 7.5 9.2
[203]
liver RAD51
Mean 0.436
Standard deviation 0.3
Values 0.33 0.19 0.35 0.87
[204]
ref_hepatocyte SMC1A
Mean 4.41
Standard deviation 2.5
Values 3.3 2.2 2.6 6.3 7.7
[205]
HepG2 SMC1A
Mean 41.7
Standard deviation 10
Values 49 35
[206]
HepG2.C3A SMC1A
Mean 33.9
Standard deviation 11
Values 41 26
[207]
HuH.7 SMC1A
Mean 65.2
Standard deviation 32
Values 64 34 98
[208]
SNU475 SMC1A
Mean 65.4
Standard deviation 7.5
Values 71 60
[209]
THLE SMC1A
Mean 132
Standard deviation 23
Values 1.2e+02 1.5e+02
[210]
liver SMC1A
Mean 34.1
Standard deviation 5.1
Values 34 28 40 35
[211]
ref_hepatocyte CLK2
Mean 4.39
Standard deviation 1
Values 4.8 4.3 4.3 5.7 2.9
[212]
HepG2 CLK2
Mean 7.92
Standard deviation 1.1
Values 7.2 8.7
[213]
HepG2.C3A CLK2
Mean 12.4
Standard deviation 2.1
Values 11 14
[214]
HuH.7 CLK2
Mean 22
Standard deviation 4.3
Values 27 19 20
[215]
SNU475 CLK2
Mean 12
Standard deviation 1.1
Values 11 13
[216]
THLE CLK2
Mean 11.4
Standard deviation 1.3
Values 12 10
[217]
liver CLK2
Mean 5.32
Standard deviation 0.7
Values 5.5 5.7 5.8 4.3
[218]
ref_hepatocyte MCM2
Mean 4.21
Standard deviation 3.2
Values 3.2 2.1 1.5 9.4 4.9
[219]
HepG2 MCM2
Mean 70.6
Standard deviation 14
Values 81 61
[220]
HepG2.C3A MCM2
Mean 42.9
Standard deviation 17
Values 55 31
[221]
HuH.7 MCM2
Mean 101
Standard deviation 57
Values 1.3e+02 36 1.4e+02
[222]
SNU475 MCM2
Mean 33.8
Standard deviation 11
Values 42 26
[223]
THLE MCM2
Mean 76.3
Standard deviation 20
Values 62 91
[224]
liver MCM2
Mean 1.95
Standard deviation 1.4
Values 0.94 4 1.1 1.8
[225]
ref_hepatocyte MSH2
Mean 3.98
Standard deviation 3.2
Values 2.4 1.5 1.3 8.5 6.1
[226]
HepG2 MSH2
Mean 15.5
Standard deviation 8
Values 21 9.9
[227]
HepG2.C3A MSH2
Mean 33.8
Standard deviation 15
Values 45 23
[228]
HuH.7 MSH2
Mean 22.1
Standard deviation 10
Values 28 10 28
[229]
SNU475 MSH2
Mean 32
Standard deviation 6.8
Values 37 27
[230]
THLE MSH2
Mean 23.1
Standard deviation 1.9
Values 22 24
[231]
liver MSH2
Mean 3.5
Standard deviation 1.1
Values 2.9 4.8 2.3 4
[232]
ref_hepatocyte RAD50
Mean 3.85
Standard deviation 2.1
Values 2.3 2.8 2.9 3.9 7.4
[233]
HepG2 RAD50
Mean 9.45
Standard deviation 2.3
Values 11 7.9
[234]
HepG2.C3A RAD50
Mean 36.9
Standard deviation 0.99
Values 36 38
[235]
HuH.7 RAD50
Mean 19.7
Standard deviation 4.1
Values 15 22 22
[236]
SNU475 RAD50
Mean 17
Standard deviation 2.2
Values 19 15
[237]
THLE RAD50
Mean 26.8
Standard deviation 8.4
Values 33 21
[238]
liver RAD50
Mean 25.2
Standard deviation 5.7
Values 18 26 32 25
[239]
ref_hepatocyte PML
Mean 3.77
Standard deviation 3.1
Values 8.7 2.3 2.5 0.6 4.7
[240]
HepG2 PML
Mean 9.79
Standard deviation 1.6
Values 8.6 11
[241]
HepG2.C3A PML
Mean 4.34
Standard deviation 1.3
Values 3.4 5.2
[242]
HuH.7 PML
Mean 13.5
Standard deviation 2.4
Values 12 12 16
[243]
SNU475 PML
Mean 25.6
Standard deviation 4.6
Values 22 29
[244]
THLE PML
Mean 20.2
Standard deviation 3.6
Values 18 23
[245]
liver PML
Mean 6.32
Standard deviation 2.7
Values 4.7 4.1 10 6.5
[246]
ref_hepatocyte RBBP8
Mean 3.69
Standard deviation 1.9
Values 3.6 1.2 3.4 3.5 6.7
[247]
HepG2 RBBP8
Mean 9.31
Standard deviation 4.7
Values 13 6
[248]
HepG2.C3A RBBP8
Mean 22.1
Standard deviation 12
Values 31 14
[249]
HuH.7 RBBP8
Mean 8.18
Standard deviation 3.3
Values 10 4.4 9.6
[250]
SNU475 RBBP8
Mean 18.3
Standard deviation 4.9
Values 22 15
[251]
THLE RBBP8
Mean 23.6
Standard deviation 4.7
Values 27 20
[252]
liver RBBP8
Mean 6.21
Standard deviation 1.4
Values 4.6 5.9 8.1 6.2
[253]
ref_hepatocyte SP1
Mean 3.57
Standard deviation 0.42
Values 4.3 3.6 3.5 3.2 3.3
[254]
HepG2 SP1
Mean 27.8
Standard deviation 1
Values 29 27
[255]
HepG2.C3A SP1
Mean 29.3
Standard deviation 0.25
Values 29 29
[256]
HuH.7 SP1
Mean 58.8
Standard deviation 12
Values 46 59 71
[257]
SNU475 SP1
Mean 41.7
Standard deviation 2.6
Values 40 44
[258]
THLE SP1
Mean 37.5
Standard deviation 7.4
Values 32 43
[259]
liver SP1
Mean 22.6
Standard deviation 13
Values 36 31 14 9.1
[260]
ref_hepatocyte TOPBP1
Mean 3.37
Standard deviation 2.5
Values 2.5 1.1 1.1 5.6 6.5
[261]
HepG2 TOPBP1
Mean 15.1
Standard deviation 7.9
Values 21 9.6
[262]
HepG2.C3A TOPBP1
Mean 27.6
Standard deviation 14
Values 37 18
[263]
HuH.7 TOPBP1
Mean 29.5
Standard deviation 9.5
Values 33 19 37
[264]
SNU475 TOPBP1
Mean 27.1
Standard deviation 3.9
Values 30 24
[265]
THLE TOPBP1
Mean 40.2
Standard deviation 1.7
Values 41 39
[266]
liver TOPBP1
Mean 8.82
Standard deviation 4
Values 9.8 14 5.3 6.1
[267]
ref_hepatocyte PRKDC
Mean 3.34
Standard deviation 1.6
Values 1.9 2.4 2.2 5.3 5
[268]
HepG2 PRKDC
Mean 137
Standard deviation 25
Values 1.5e+02 1.2e+02
[269]
HepG2.C3A PRKDC
Mean 84.1
Standard deviation 23
Values 1e+02 68
[270]
HuH.7 PRKDC
Mean 299
Standard deviation 1.8e+02
Values 2.4e+02 1.6e+02 5e+02
[271]
SNU475 PRKDC
Mean 182
Standard deviation 16
Values 1.9e+02 1.7e+02
[272]
THLE PRKDC
Mean 216
Standard deviation 37
Values 1.9e+02 2.4e+02
[273]
liver PRKDC
Mean 89.5
Standard deviation 54
Values 1.1e+02 1.5e+02 43 47
[274]
ref_hepatocyte HUS1
Mean 3.03
Standard deviation 1.3
Values 2 4.3 4 1.3 3.5
[275]
HepG2 HUS1
Mean 4.07
Standard deviation 1.2
Values 4.9 3.2
[276]
HepG2.C3A HUS1
Mean 4.39
Standard deviation 0.9
Values 5 3.8
[277]
HuH.7 HUS1
Mean 6.13
Standard deviation 0.51
Values 5.6 6.3 6.5
[278]
SNU475 HUS1
Mean 5.15
Standard deviation 0.24
Values 5.3 5
[279]
THLE HUS1
Mean 5.04
Standard deviation 0.88
Values 4.4 5.7
[280]
liver HUS1
Mean 11.1
Standard deviation 2.6
Values 13 8.2 13 9.7
[281]
ref_hepatocyte RFWD3
Mean 2.97
Standard deviation 1.6
Values 3.4 1.3 1.5 5.1 3.6
[282]
HepG2 RFWD3
Mean 40.2
Standard deviation 8
Values 46 34
[283]
HepG2.C3A RFWD3
Mean 33.1
Standard deviation 19
Values 47 20
[284]
HuH.7 RFWD3
Mean 35.6
Standard deviation 15
Values 41 19 47
[285]
SNU475 RFWD3
Mean 33.5
Standard deviation 8.1
Values 39 28
[286]
THLE RFWD3
Mean 45.9
Standard deviation 2.9
Values 44 48
[287]
liver RFWD3
Mean 6.97
Standard deviation 2
Values 8.2 9 4.7 6.1
[288]
ref_hepatocyte PPM1D
Mean 2.87
Standard deviation 3.6
Values 0.52 0.76 1.3 9.2 2.6
[289]
HepG2 PPM1D
Mean 15.1
Standard deviation 1.8
Values 16 14
[290]
HepG2.C3A PPM1D
Mean 15.8
Standard deviation 3.6
Values 18 13
[291]
HuH.7 PPM1D
Mean 8.78
Standard deviation 0.9
Values 8.1 9.8 8.4
[292]
SNU475 PPM1D
Mean 3.75
Standard deviation 0.29
Values 4 3.5
[293]
THLE PPM1D
Mean 8.79
Standard deviation 0.14
Values 8.9 8.7
[294]
liver PPM1D
Mean 4.38
Standard deviation 0.4
Values 4.8 4.6 3.9 4.3
[295]
ref_hepatocyte SMARCAL1
Mean 2.74
Standard deviation 1.5
Values 1.8 2.7 2.5 5.2 1.5
[296]
HepG2 SMARCAL1
Mean 14.7
Standard deviation 0.087
Values 15 15
[297]
HepG2.C3A SMARCAL1
Mean 13.9
Standard deviation 0.79
Values 13 14
[298]
HuH.7 SMARCAL1
Mean 13.5
Standard deviation 1.2
Values 14 12 14
[299]
SNU475 SMARCAL1
Mean 11.4
Standard deviation 1.1
Values 11 12
[300]
THLE SMARCAL1
Mean 9.49
Standard deviation 1.5
Values 8.4 11
[301]
liver SMARCAL1
Mean 3.35
Standard deviation 1.3
Values 2.2 2.3 4.1 4.8
[302]
ref_hepatocyte RECQL5
Mean 2.61
Standard deviation 0.91
Values 1.1 3.2 2.7 3.3 2.7
[303]
HepG2 RECQL5
Mean 13.9
Standard deviation 0.79
Values 13 14
[304]
HepG2.C3A RECQL5
Mean 15.8
Standard deviation 1.7
Values 15 17
[305]
HuH.7 RECQL5
Mean 11.7
Standard deviation 2.9
Values 14 8.7 12
[306]
SNU475 RECQL5
Mean 8.91
Standard deviation 0.89
Values 8.3 9.5
[307]
THLE RECQL5
Mean 8.83
Standard deviation 0.51
Values 9.2 8.5
[308]
liver RECQL5
Mean 7.06
Standard deviation 0.54
Values 6.9 6.7 7.8 6.8
[309]
ref_hepatocyte CDC45
Mean 2.51
Standard deviation 2.5
Values 1.3 0.37 1.1 3.1 6.6
[310]
HepG2 CDC45
Mean 12.8
Standard deviation 2.7
Values 15 11
[311]
HepG2.C3A CDC45
Mean 11
Standard deviation 7.8
Values 17 5.4
[312]
HuH.7 CDC45
Mean 16.7
Standard deviation 12
Values 26 3.6 20
[313]
SNU475 CDC45
Mean 11
Standard deviation 3.8
Values 14 8.4
[314]
THLE CDC45
Mean 15.7
Standard deviation 2.2
Values 14 17
[315]
liver CDC45
Mean 0.476
Standard deviation 0.53
Values 0 0.56 0.16 1.2
[316]
ref_hepatocyte E2F1
Mean 2.5
Standard deviation 3.1
Values 0.64 0.54 1.2 7.9 2.2
[317]
HepG2 E2F1
Mean 21.3
Standard deviation 1.8
Values 23 20
[318]
HepG2.C3A E2F1
Mean 17.2
Standard deviation 4.9
Values 21 14
[319]
HuH.7 E2F1
Mean 18
Standard deviation 12
Values 28 5.1 21
[320]
SNU475 E2F1
Mean 16.7
Standard deviation 4.8
Values 20 13
[321]
THLE E2F1
Mean 25.4
Standard deviation 2.4
Values 24 27
[322]
liver E2F1
Mean 0.29
Standard deviation 0.19
Values 0.15 0.49 0.12 0.41
[323]
ref_hepatocyte CHEK1
Mean 2.44
Standard deviation 1.9
Values 1.9 0.99 0.69 3.2 5.4
[324]
HepG2 CHEK1
Mean 15.6
Standard deviation 7.2
Values 21 11
[325]
HepG2.C3A CHEK1
Mean 17.9
Standard deviation 12
Values 26 9.6
[326]
HuH.7 CHEK1
Mean 12.7
Standard deviation 5.1
Values 16 6.8 15
[327]
SNU475 CHEK1
Mean 19.9
Standard deviation 4.6
Values 23 17
[328]
THLE CHEK1
Mean 26.2
Standard deviation 4.4
Values 23 29
[329]
liver CHEK1
Mean 0.851
Standard deviation 0.2
Values 0.64 1 0.73 1
[330]
ref_hepatocyte MCPH1
Mean 2.3
Standard deviation 0.86
Values 2.8 1.3 1.5 3.1 2.9
[331]
HepG2 MCPH1
Mean 9.4
Standard deviation 0.39
Values 9.7 9.1
[332]
HepG2.C3A MCPH1
Mean 12.6
Standard deviation 2
Values 14 11
[333]
HuH.7 MCPH1
Mean 16.7
Standard deviation 1.7
Values 15 17 18
[334]
SNU475 MCPH1
Mean 2.83
Standard deviation 0.075
Values 2.9 2.8
[335]
THLE MCPH1
Mean 6.59
Standard deviation 0.51
Values 6.2 7
[336]
liver MCPH1
Mean 7.16
Standard deviation 1.3
Values 7.9 8.7 6.1 6
[337]
ref_hepatocyte FANCA
Mean 2.24
Standard deviation 2.5
Values 0.84 0.97 0.88 6.7 1.8
[338]
HepG2 FANCA
Mean 15.7
Standard deviation 4.1
Values 19 13
[339]
HepG2.C3A FANCA
Mean 22.4
Standard deviation 5.6
Values 26 18
[340]
HuH.7 FANCA
Mean 17.6
Standard deviation 8.7
Values 23 7.6 22
[341]
SNU475 FANCA
Mean 10.2
Standard deviation 0.8
Values 11 9.7
[342]
THLE FANCA
Mean 14.6
Standard deviation 0.046
Values 15 15
[343]
liver FANCA
Mean 2.48
Standard deviation 0.66
Values 1.7 3.2 2.2 2.7
[344]
ref_hepatocyte MDC1
Mean 2.03
Standard deviation 1.1
Values 2.9 1.1 1.1 3.5 1.6
[345]
HepG2 MDC1
Mean 25.1
Standard deviation 0.18
Values 25 25
[346]
HepG2.C3A MDC1
Mean 29.6
Standard deviation 2.6
Values 31 28
[347]
HuH.7 MDC1
Mean 35.9
Standard deviation 14
Values 34 23 51
[348]
SNU475 MDC1
Mean 27.7
Standard deviation 2.6
Values 30 26
[349]
THLE MDC1
Mean 29.5
Standard deviation 7.6
Values 24 35
[350]
liver MDC1
Mean 7.87
Standard deviation 1.2
Values 9.1 6.3 7.8 8.2
[351]
ref_hepatocyte TOP3A
Mean 1.96
Standard deviation 0.76
Values 3.2 1.7 2.2 1.2 1.6
[352]
HepG2 TOP3A
Mean 16.9
Standard deviation 1.9
Values 18 16
[353]
HepG2.C3A TOP3A
Mean 12
Standard deviation 1.5
Values 13 11
[354]
HuH.7 TOP3A
Mean 14.2
Standard deviation 4.3
Values 15 9.6 18
[355]
SNU475 TOP3A
Mean 13
Standard deviation 2.3
Values 15 11
[356]
THLE TOP3A
Mean 19.1
Standard deviation 2.9
Values 17 21
[357]
liver TOP3A
Mean 9.68
Standard deviation 2.3
Values 12 9.9 6.7 9.7
[358]
ref_hepatocyte RAD1
Mean 1.96
Standard deviation 0.26
Values 2.2 1.5 1.9 2.2 2
[359]
HepG2 RAD1
Mean 11.2
Standard deviation 2.3
Values 13 9.5
[360]
HepG2.C3A RAD1
Mean 15.9
Standard deviation 6.5
Values 20 11
[361]
HuH.7 RAD1
Mean 22.1
Standard deviation 5.4
Values 23 16 27
[362]
SNU475 RAD1
Mean 12.6
Standard deviation 1.7
Values 14 11
[363]
THLE RAD1
Mean 26.1
Standard deviation 1.3
Values 27 25
[364]
liver RAD1
Mean 5.22
Standard deviation 0.96
Values 5 4.2 5.2 6.5
[365]
ref_hepatocyte PALB2
Mean 1.9
Standard deviation 1.6
Values 1.8 1 1.4 4.6 0.75
[366]
HepG2 PALB2
Mean 14.3
Standard deviation 5.9
Values 18 10
[367]
HepG2.C3A PALB2
Mean 15.7
Standard deviation 6.5
Values 20 11
[368]
HuH.7 PALB2
Mean 11.6
Standard deviation 2.8
Values 12 8.6 14
[369]
SNU475 PALB2
Mean 5.68
Standard deviation 1.3
Values 6.6 4.7
[370]
THLE PALB2
Mean 8.95
Standard deviation 1.3
Values 8 9.9
[371]
liver PALB2
Mean 4.31
Standard deviation 1.1
Values 3.3 4.4 5.7 3.8
[372]
ref_hepatocyte RAD9A
Mean 1.87
Standard deviation 0.75
Values 0.94 1.9 3 2 1.5
[373]
HepG2 RAD9A
Mean 4.33
Standard deviation 0.024
Values 4.3 4.3
[374]
HepG2.C3A RAD9A
Mean 4.7
Standard deviation 0.12
Values 4.8 4.6
[375]
HuH.7 RAD9A
Mean 15.8
Standard deviation 6.3
Values 22 9.4 16
[376]
SNU475 RAD9A
Mean 17.3
Standard deviation 3.3
Values 20 15
[377]
THLE RAD9A
Mean 4.29
Standard deviation 0.62
Values 4.7 3.8
[378]
liver RAD9A
Mean 2.36
Standard deviation 1.1
Values 1.8 1.1 3.3 3.2
[379]
ref_hepatocyte BRCA1
Mean 1.87
Standard deviation 0.88
Values 0.59 2 2.6 2.7 1.4
[380]
HepG2 BRCA1
Mean 13.1
Standard deviation 3
Values 15 11
[381]
HepG2.C3A BRCA1
Mean 27.8
Standard deviation 18
Values 40 15
[382]
HuH.7 BRCA1
Mean 35
Standard deviation 16
Values 39 17 49
[383]
SNU475 BRCA1
Mean 15.2
Standard deviation 6.4
Values 20 11
[384]
THLE BRCA1
Mean 24.5
Standard deviation 0.48
Values 25 24
[385]
liver BRCA1
Mean 8.47
Standard deviation 9.4
Values 4.5 4.3 22 2.5
[386]
ref_hepatocyte FANCI
Mean 1.74
Standard deviation 1.2
Values 0.8 0.81 0.94 3.3 2.9
[387]
HepG2 FANCI
Mean 20.8
Standard deviation 7.3
Values 26 16
[388]
HepG2.C3A FANCI
Mean 25.1
Standard deviation 16
Values 36 14
[389]
HuH.7 FANCI
Mean 33.9
Standard deviation 17
Values 42 14 45
[390]
SNU475 FANCI
Mean 32.4
Standard deviation 5.2
Values 36 29
[391]
THLE FANCI
Mean 45
Standard deviation 6.4
Values 40 50
[392]
liver FANCI
Mean 2.21
Standard deviation 1.1
Values 1.2 3.4 1.5 2.8
[393]
ref_hepatocyte HERC2
Mean 1.73
Standard deviation 0.74
Values 0.75 1.5 1.6 2.1 2.7
[394]
HepG2 HERC2
Mean 20.9
Standard deviation 3.4
Values 23 19
[395]
HepG2.C3A HERC2
Mean 15.1
Standard deviation 0.69
Values 16 15
[396]
HuH.7 HERC2
Mean 21.3
Standard deviation 6.2
Values 17 19 28
[397]
SNU475 HERC2
Mean 26.9
Standard deviation 2.6
Values 25 29
[398]
THLE HERC2
Mean 31.7
Standard deviation 7.8
Values 26 37
[399]
liver HERC2
Mean 44
Standard deviation 30
Values 68 72 20 17
[400]
ref_hepatocyte DCLRE1A
Mean 1.63
Standard deviation 0.51
Values 1.9 1.5 2 1.9 0.78
[401]
HepG2 DCLRE1A
Mean 6.09
Standard deviation 2.9
Values 8.1 4.1
[402]
HepG2.C3A DCLRE1A
Mean 21
Standard deviation 13
Values 30 12
[403]
HuH.7 DCLRE1A
Mean 15.4
Standard deviation 5.3
Values 18 9.3 19
[404]
SNU475 DCLRE1A
Mean 6.63
Standard deviation 1.1
Values 7.4 5.8
[405]
THLE DCLRE1A
Mean 9.51
Standard deviation 0.56
Values 9.9 9.1
[406]
liver DCLRE1A
Mean 7.19
Standard deviation 2.9
Values 7.1 11 3.9 6.8
[407]
ref_hepatocyte ATRIP
Mean 1.54
Standard deviation 0.36
Values 2 1.1 1.4 1.6 1.6
[408]
HepG2 ATRIP
Mean 4.04
Standard deviation 0.45
Values 4.4 3.7
[409]
HepG2.C3A ATRIP
Mean 4.26
Standard deviation 1.1
Values 5.1 3.5
[410]
HuH.7 ATRIP
Mean 7.5
Standard deviation 2.3
Values 9.2 4.8 8.5
[411]
SNU475 ATRIP
Mean 2.23
Standard deviation 0.45
Values 2.5 1.9
[412]
THLE ATRIP
Mean 5.29
Standard deviation 1.3
Values 4.4 6.2
[413]
liver ATRIP
Mean 1.96
Standard deviation 0.19
Values 2.2 2.1 1.9 1.7
[414]
ref_hepatocyte TDP1
Mean 1.53
Standard deviation 0.64
Values 2.5 0.89 0.95 1.7 1.7
[415]
HepG2 TDP1
Mean 10.1
Standard deviation 2.4
Values 12 8.4
[416]
HepG2.C3A TDP1
Mean 9.75
Standard deviation 2.6
Values 12 7.9
[417]
HuH.7 TDP1
Mean 7.85
Standard deviation 2.7
Values 9.3 4.7 9.5
[418]
SNU475 TDP1
Mean 10.5
Standard deviation 1
Values 9.8 11
[419]
THLE TDP1
Mean 8.61
Standard deviation 0.7
Values 8.1 9.1
[420]
liver TDP1
Mean 2.9
Standard deviation 0.65
Values 2.1 2.8 3.1 3.6
[421]
ref_hepatocyte ATR
Mean 1.48
Standard deviation 0.93
Values 0.87 0.82 1.1 1.5 3.1
[422]
HepG2 ATR
Mean 6.99
Standard deviation 2.6
Values 8.9 5.1
[423]
HepG2.C3A ATR
Mean 12.4
Standard deviation 3
Values 15 10
[424]
HuH.7 ATR
Mean 12.6
Standard deviation 3.2
Values 11 10 16
[425]
SNU475 ATR
Mean 15.7
Standard deviation 0.082
Values 16 16
[426]
THLE ATR
Mean 17.2
Standard deviation 1.5
Values 18 16
[427]
liver ATR
Mean 24.7
Standard deviation 14
Values 28 43 13 15
[428]
ref_hepatocyte TP53BP1
Mean 1.45
Standard deviation 0.79
Values 0.55 1.1 1.2 2.6 1.9
[429]
HepG2 TP53BP1
Mean 19.2
Standard deviation 4.3
Values 22 16
[430]
HepG2.C3A TP53BP1
Mean 12.2
Standard deviation 0.33
Values 12 12
[431]
HuH.7 TP53BP1
Mean 22.8
Standard deviation 5.7
Values 20 19 29
[432]
SNU475 TP53BP1
Mean 40.8
Standard deviation 4
Values 38 44
[433]
THLE TP53BP1
Mean 31.4
Standard deviation 1.4
Values 30 32
[434]
liver TP53BP1
Mean 10
Standard deviation 6
Values 9.1 19 4.5 8
[435]
ref_hepatocyte CEP164
Mean 1.45
Standard deviation 0.64
Values 1.6 0.92 0.92 1.4 2.5
[436]
HepG2 CEP164
Mean 14
Standard deviation 1.9
Values 15 13
[437]
HepG2.C3A CEP164
Mean 12.8
Standard deviation 0.72
Values 12 13
[438]
HuH.7 CEP164
Mean 10.5
Standard deviation 0.76
Values 11 9.7 11
[439]
SNU475 CEP164
Mean 14.4
Standard deviation 1.5
Values 15 13
[440]
THLE CEP164
Mean 12.9
Standard deviation 1
Values 12 14
[441]
liver CEP164
Mean 5.28
Standard deviation 1.7
Values 6.4 7 4.6 3.2
[442]
ref_hepatocyte FOXM1
Mean 1.44
Standard deviation 0.69
Values 1.2 0.55 1.2 2.4 1.9
[443]
HepG2 FOXM1
Mean 29.8
Standard deviation 8.6
Values 36 24
[444]
HepG2.C3A FOXM1
Mean 24.7
Standard deviation 10
Values 32 18
[445]
HuH.7 FOXM1
Mean 41.2
Standard deviation 21
Values 46 19 59
[446]
SNU475 FOXM1
Mean 19.9
Standard deviation 1.7
Values 21 19
[447]
THLE FOXM1
Mean 63.7
Standard deviation 17
Values 52 76
[448]
liver FOXM1
Mean 1.34
Standard deviation 1
Values 0.46 0.97 1.2 2.8
[449]
ref_hepatocyte WRN
Mean 1.33
Standard deviation 0.66
Values 1.8 0.54 0.68 1.8 1.8
[450]
HepG2 WRN
Mean 4.47
Standard deviation 1.6
Values 5.6 3.3
[451]
HepG2.C3A WRN
Mean 11
Standard deviation 2.1
Values 12 9.5
[452]
HuH.7 WRN
Mean 40.4
Standard deviation 6.8
Values 33 46 43
[453]
SNU475 WRN
Mean 7.93
Standard deviation 0.72
Values 7.4 8.4
[454]
THLE WRN
Mean 7.81
Standard deviation 1.9
Values 9.2 6.5
[455]
liver WRN
Mean 7.39
Standard deviation 3.4
Values 10 10 4.3 4.7
[456]
ref_hepatocyte RAD52
Mean 1.25
Standard deviation 1
Values 0.41 0.69 0.69 3 1.5
[457]
HepG2 RAD52
Mean 3.59
Standard deviation 0.51
Values 4 3.2
[458]
HepG2.C3A RAD52
Mean 5.44
Standard deviation 1.1
Values 6.2 4.6
[459]
HuH.7 RAD52
Mean 5.64
Standard deviation 0.31
Values 6 5.5 5.5
[460]
SNU475 RAD52
Mean 1.72
Standard deviation 0.32
Values 1.5 1.9
[461]
THLE RAD52
Mean 2.65
Standard deviation 0.0047
Values 2.7 2.6
[462]
liver RAD52
Mean 3
Standard deviation 0.29
Values 2.8 3.4 2.8 3
[463]
ref_hepatocyte CLSPN
Mean 1.25
Standard deviation 1.7
Values 0.23 0.12 0.25 4 1.6
[464]
HepG2 CLSPN
Mean 7.06
Standard deviation 4
Values 9.9 4.3
[465]
HepG2.C3A CLSPN
Mean 8.47
Standard deviation 7.1
Values 13 3.5
[466]
HuH.7 CLSPN
Mean 9.87
Standard deviation 6.4
Values 12 2.7 15
[467]
SNU475 CLSPN
Mean 15.4
Standard deviation 7.1
Values 20 10
[468]
THLE CLSPN
Mean 22.6
Standard deviation 1.9
Values 21 24
[469]
liver CLSPN
Mean 0.804
Standard deviation 0.54
Values 0.44 1.5 0.35 0.9
[470]
ref_hepatocyte RMI1
Mean 1.11
Standard deviation 0.61
Values 0.59 1 0.72 2.1 1.1
[471]
HepG2 RMI1
Mean 3.68
Standard deviation 1.6
Values 4.8 2.5
[472]
HepG2.C3A RMI1
Mean 7.72
Standard deviation 4.6
Values 11 4.4
[473]
HuH.7 RMI1
Mean 10.1
Standard deviation 1.9
Values 11 8.1 12
[474]
SNU475 RMI1
Mean 8.62
Standard deviation 0.62
Values 9.1 8.2
[475]
THLE RMI1
Mean 17.4
Standard deviation 1
Values 17 18
[476]
liver RMI1
Mean 3.13
Standard deviation 0.48
Values 2.5 3.1 3.2 3.7
[477]
ref_hepatocyte FANCD2
Mean 1.11
Standard deviation 0.73
Values 1.4 0.24 0.44 1.5 1.9
[478]
HepG2 FANCD2
Mean 13.2
Standard deviation 3.4
Values 16 11
[479]
HepG2.C3A FANCD2
Mean 13
Standard deviation 7.3
Values 18 7.9
[480]
HuH.7 FANCD2
Mean 26.2
Standard deviation 13
Values 35 11 33
[481]
SNU475 FANCD2
Mean 10.9
Standard deviation 2.9
Values 13 8.8
[482]
THLE FANCD2
Mean 19.7
Standard deviation 1.7
Values 18 21
[483]
liver FANCD2
Mean 1.6
Standard deviation 1
Values 1 2.8 0.52 2.1
[484]
ref_hepatocyte ATM
Mean 0.969
Standard deviation 0.7
Values 0.27 1.1 0.7 2.1 0.69
[485]
HepG2 ATM
Mean 17.5
Standard deviation 8.3
Values 23 12
[486]
HepG2.C3A ATM
Mean 47.4
Standard deviation 4.5
Values 51 44
[487]
HuH.7 ATM
Mean 37.5
Standard deviation 9.1
Values 27 44 41
[488]
SNU475 ATM
Mean 31.7
Standard deviation 8.2
Values 26 38
[489]
THLE ATM
Mean 24.9
Standard deviation 4.4
Values 28 22
[490]
liver ATM
Mean 43.7
Standard deviation 31
Values 64 76 17 17
[491]
ref_hepatocyte CDC25C
Mean 0.731
Standard deviation 0.89
Values 0.11 0.13 0.078 2 1.3
[492]
HepG2 CDC25C
Mean 6.16
Standard deviation 0.58
Values 6.6 5.7
[493]
HepG2.C3A CDC25C
Mean 12.2
Standard deviation 6.2
Values 17 7.8
[494]
HuH.7 CDC25C
Mean 12
Standard deviation 5.4
Values 16 5.9 14
[495]
SNU475 CDC25C
Mean 5.11
Standard deviation 0.28
Values 4.9 5.3
[496]
THLE CDC25C
Mean 10.3
Standard deviation 1.8
Values 9 12
[497]
liver CDC25C
Mean 0.389
Standard deviation 0.27
Values 0.013 0.43 0.45 0.67
[498]
ref_hepatocyte EXO1
Mean 0.669
Standard deviation 0.56
Values 0.19 0.12 0.53 1.1 1.4
[499]
HepG2 EXO1
Mean 5.53
Standard deviation 3.6
Values 8 3
[500]
HepG2.C3A EXO1
Mean 6
Standard deviation 4.2
Values 8.9 3.1
[501]
HuH.7 EXO1
Mean 13
Standard deviation 8
Values 17 3.7 18
[502]
SNU475 EXO1
Mean 16.8
Standard deviation 6.9
Values 22 12
[503]
THLE EXO1
Mean 11.5
Standard deviation 1.2
Values 11 12
[504]
liver EXO1
Mean 0.343
Standard deviation 0.28
Values 0.053 0.73 0.28 0.31
[505]
ref_hepatocyte BRIP1
Mean 0.512
Standard deviation 0.37
Values 0.29 0.37 0.2 1.1 0.59
[506]
HepG2 BRIP1
Mean 5
Standard deviation 2.9
Values 7 3
[507]
HepG2.C3A BRIP1
Mean 11.8
Standard deviation 7.8
Values 17 6.3
[508]
HuH.7 BRIP1
Mean 11.4
Standard deviation 5.9
Values 12 5.2 17
[509]
SNU475 BRIP1
Mean 8.68
Standard deviation 2.1
Values 10 7.2
[510]
THLE BRIP1
Mean 10
Standard deviation 0.62
Values 10 9.6
[511]
liver BRIP1
Mean 2.83
Standard deviation 1.3
Values 3.5 4.3 1.7 1.7
[512]
ref_hepatocyte BARD1
Mean 0.427
Standard deviation 0.62
Values 0 0 0.1 0.59 1.4
[513]
HepG2 BARD1
Mean 2.35
Standard deviation 1.5
Values 3.4 1.3
[514]
HepG2.C3A BARD1
Mean 4.15
Standard deviation 3.3
Values 6.4 1.8
[515]
HuH.7 BARD1
Mean 4.04
Standard deviation 1.6
Values 3.3 3 5.9
[516]
SNU475 BARD1
Mean 5.09
Standard deviation 0.31
Values 5.3 4.9
[517]
THLE BARD1
Mean 6.04
Standard deviation 1.7
Values 4.8 7.3
[518]
liver BARD1
Mean 2.22
Standard deviation 0.7
Values 2.5 3 1.4 1.9
[519]
ref_hepatocyte BRCA2
Mean 0.134
Standard deviation 0.16
Values 0 0.041 0.026 0.26 0.35
[520]
HepG2 BRCA2
Mean 2.06
Standard deviation 0.93
Values 2.7 1.4
[521]
HepG2.C3A BRCA2
Mean 10.4
Standard deviation 8.9
Values 17 4.1
[522]
HuH.7 BRCA2
Mean 11.2
Standard deviation 6.2
Values 9.6 5.9 18
[523]
SNU475 BRCA2
Mean 5.48
Standard deviation 3.4
Values 7.9 3.1
[524]
THLE BRCA2
Mean 6.84
Standard deviation 2
Values 8.2 5.4
[525]
liver BRCA2
Mean 2.07
Standard deviation 0.83
Values 1.6 3.3 1.6 1.7
[526]
ref_hepatocyte POLN
Mean 0.0645
Standard deviation 0.1
Values 0 0.081 0.24 0 0
[527]
HepG2 POLN
Mean 0.073
Standard deviation 0.006
Values 0.077 0.069
[528]
HepG2.C3A POLN
Mean 0.263
Standard deviation 0.068
Values 0.21 0.31
[529]
HuH.7 POLN
Mean 1.23
Standard deviation 0.39
Values 1.5 0.78 1.4
[530]
SNU475 POLN
Mean 0.772
Standard deviation 0.32
Values 0.55 1
[531]
THLE POLN
Mean 0.491
Standard deviation 0.13
Values 0.4 0.59
[532]
liver POLN
Mean 0.636
Standard deviation 0.18
Values 0.53 0.87 0.68 0.46
[533]
ref_hepatocyte ABRAXAS1
Missing
[534]
HepG2 ABRAXAS1
Missing
[535]
HepG2.C3A ABRAXAS1
Missing
[536]
HuH.7 ABRAXAS1
Missing
[537]
SNU475 ABRAXAS1
Missing
[538]
THLE ABRAXAS1
Missing
[539]
liver ABRAXAS1
Missing
[540]
ref_hepatocyte H2AX
Missing
[541]
HepG2 H2AX
Missing
[542]
HepG2.C3A H2AX
Missing
[543]
HuH.7 H2AX
Missing
[544]
SNU475 H2AX
Missing
[545]
THLE H2AX
Missing
[546]
liver H2AX
Missing
[547]
ref_hepatocyte MIR4741
Missing
[548]
HepG2 MIR4741
Missing
[549]
HepG2.C3A MIR4741
Missing
[550]
HuH.7 MIR4741
Missing
[551]
SNU475 MIR4741
Missing
[552]
THLE MIR4741
Missing
[553]
liver MIR4741
Missing
[554]
ref_hepatocyte MRE11
Missing
[555]
HepG2 MRE11
Missing
[556]
HepG2.C3A MRE11
Missing
[557]
HuH.7 MRE11
Missing
[558]
SNU475 MRE11
Missing
[559]
THLE MRE11
Missing
[560]
liver MRE11
Missing
[561]
ref_hepatocyte SEM1
Missing
[562]
HepG2 SEM1
Missing
[563]
HepG2.C3A SEM1
Missing
[564]
HuH.7 SEM1
Missing
[565]
SNU475 SEM1
Missing
[566]
THLE SEM1
Missing
[567]
liver SEM1
Missing