WP_DDX1_AS_A_REGULATORY_COMPONENT_OF_THE_DROSHA_MICROPROCESSOR Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 DDX1 ATP-dependent RNA helicase DDX1 [1] -0.45[2] -0.74[3] -0.73[4] -0.65[5] -1.07[6] -1.62[7]
2 NBN Nibrin [8] -0.79[9] -0.41[10] -0.36[11] 0.37[12] -0.16[13] 0.30[14]
3 RAD50 DNA repair protein RAD50 [15] -0.22[16] 1.11[17] 0.55[18] 0.14[19] 0.98[20] 1.23[21]
4 DROSHA Ribonuclease 3 [22] 1.12[23] 0.28[24] 0.60[25] 0.83[26] 1.54[27] -0.07[28]
5 DGCR8 Microprocessor complex subunit DGCR8 [29] 0.95[30] -0.05[31] 0.44[32] 0.13[33] 0.67[34] 0.50[35]
6 ATM Serine-protein kinase ATM [36] 2.66[37] 3.46[38] 3.48[39] 3.03[40] 2.86[41] 4.01[42]
7 MIR1306 [43] [44] [45] [46] [47] [48] [49]
8 MIR3618 [50] [51] [52] [53] [54] [55] [56]
9 MRE11 Double-strand break repair protein MRE11 [57] [58] [59] [60] [61] [62] [63]

[1]
ref_hepatocyte DDX1
Mean 33.1
Standard deviation 19
Values 20 19 21 44 61
[2]
HepG2 DDX1
Mean 69
Standard deviation 18
Values 82 56
[3]
HepG2.C3A DDX1
Mean 88.3
Standard deviation 25
Values 1.1e+02 71
[4]
HuH.7 DDX1
Mean 69.5
Standard deviation 18
Values 83 49 77
[5]
SNU475 DDX1
Mean 85.1
Standard deviation 7
Values 90 80
[6]
THLE DDX1
Mean 55.7
Standard deviation 3.5
Values 53 58
[7]
liver DDX1
Mean 30.2
Standard deviation 10
Values 18 25 37 40
[8]
ref_hepatocyte NBN
Mean 5.99
Standard deviation 3.6
Values 3.9 4.3 2.7 7.6 11
[9]
HepG2 NBN
Mean 9.9
Standard deviation 6.3
Values 14 5.4
[10]
HepG2.C3A NBN
Mean 20
Standard deviation 9.1
Values 26 14
[11]
HuH.7 NBN
Mean 16.2
Standard deviation 4.2
Values 17 12 20
[12]
SNU475 NBN
Mean 31.2
Standard deviation 0.96
Values 32 30
[13]
THLE NBN
Mean 19
Standard deviation 0.88
Values 20 18
[14]
liver NBN
Mean 20.5
Standard deviation 4.2
Values 16 24 19 24
[15]
ref_hepatocyte RAD50
Mean 3.85
Standard deviation 2.1
Values 2.3 2.8 2.9 3.9 7.4
[16]
HepG2 RAD50
Mean 9.45
Standard deviation 2.3
Values 11 7.9
[17]
HepG2.C3A RAD50
Mean 36.9
Standard deviation 0.99
Values 36 38
[18]
HuH.7 RAD50
Mean 19.7
Standard deviation 4.1
Values 15 22 22
[19]
SNU475 RAD50
Mean 17
Standard deviation 2.2
Values 19 15
[20]
THLE RAD50
Mean 26.8
Standard deviation 8.4
Values 33 21
[21]
liver RAD50
Mean 25.2
Standard deviation 5.7
Values 18 26 32 25
[22]
ref_hepatocyte DROSHA
Mean 3.35
Standard deviation 1.4
Values 3.4 2 2 5.1 4.1
[23]
HepG2 DROSHA
Mean 20.7
Standard deviation 6.9
Values 26 16
[24]
HepG2.C3A DROSHA
Mean 18.1
Standard deviation 4.4
Values 21 15
[25]
HuH.7 DROSHA
Mean 17.7
Standard deviation 6.6
Values 18 11 24
[26]
SNU475 DROSHA
Mean 23.9
Standard deviation 1.3
Values 23 25
[27]
THLE DROSHA
Mean 34.3
Standard deviation 0.86
Values 34 35
[28]
liver DROSHA
Mean 8.89
Standard deviation 1.2
Values 8.7 11 7.8 8.3
[29]
ref_hepatocyte DGCR8
Mean 3.11
Standard deviation 0.68
Values 3 2.6 2.9 4.3 2.8
[30]
HepG2 DGCR8
Mean 17.2
Standard deviation 0.021
Values 17 17
[31]
HepG2.C3A DGCR8
Mean 13.4
Standard deviation 2.2
Values 15 12
[32]
HuH.7 DGCR8
Mean 14.7
Standard deviation 4.5
Values 19 9.7 16
[33]
SNU475 DGCR8
Mean 13.7
Standard deviation 1
Values 14 13
[34]
THLE DGCR8
Mean 17.5
Standard deviation 0.73
Values 17 18
[35]
liver DGCR8
Mean 12.3
Standard deviation 3.6
Values 14 16 12 7.5
[36]
ref_hepatocyte ATM
Mean 0.969
Standard deviation 0.7
Values 0.27 1.1 0.7 2.1 0.69
[37]
HepG2 ATM
Mean 17.5
Standard deviation 8.3
Values 23 12
[38]
HepG2.C3A ATM
Mean 47.4
Standard deviation 4.5
Values 51 44
[39]
HuH.7 ATM
Mean 37.5
Standard deviation 9.1
Values 27 44 41
[40]
SNU475 ATM
Mean 31.7
Standard deviation 8.2
Values 26 38
[41]
THLE ATM
Mean 24.9
Standard deviation 4.4
Values 28 22
[42]
liver ATM
Mean 43.7
Standard deviation 31
Values 64 76 17 17
[43]
ref_hepatocyte MIR1306
Missing
[44]
HepG2 MIR1306
Missing
[45]
HepG2.C3A MIR1306
Missing
[46]
HuH.7 MIR1306
Missing
[47]
SNU475 MIR1306
Missing
[48]
THLE MIR1306
Missing
[49]
liver MIR1306
Missing
[50]
ref_hepatocyte MIR3618
Missing
[51]
HepG2 MIR3618
Missing
[52]
HepG2.C3A MIR3618
Missing
[53]
HuH.7 MIR3618
Missing
[54]
SNU475 MIR3618
Missing
[55]
THLE MIR3618
Missing
[56]
liver MIR3618
Missing
[57]
ref_hepatocyte MRE11
Missing
[58]
HepG2 MRE11
Missing
[59]
HepG2.C3A MRE11
Missing
[60]
HuH.7 MRE11
Missing
[61]
SNU475 MRE11
Missing
[62]
THLE MRE11
Missing
[63]
liver MRE11
Missing