WP_BASE_EXCISION_REPAIR | Return to index | ||||||||
Order | Gene | Description | ref_hepatocyte | HepG2 | HepG2.C3A | HuH.7 | SNU475 | THLE | liver |
1 | HMGB1 | High mobility group protein B1 | [1] | -0.22[2] | 0.31[3] | -0.12[4] | 0.39[5] | 0.09[6] | 0.19[7] |
2 | APEX1 | DNA-(apurinic or apyrimidinic site) lyase | [8] | 0.17[9] | -0.39[10] | 0.36[11] | -0.88[12] | -1.01[13] | -0.93[14] |
3 | PARP1 | Poly [ADP-ribose] polymerase 1 | [15] | 0.20[16] | -0.25[17] | 0.32[18] | 0.46[19] | 0.20[20] | 0.33[21] |
4 | PCNA | Proliferating cell nuclear antigen | [22] | 0.96[23] | 0.74[24] | -0.84[25] | -0.28[26] | 0.22[27] | -2.33[28] |
5 | POLD2 | DNA polymerase delta subunit 2 | [29] | -0.52[30] | -0.56[31] | -0.22[32] | -0.93[33] | -0.34[34] | 0.62[35] |
6 | POLD4 | DNA polymerase delta subunit 4 | [36] | -2.06[37] | -2.61[38] | -0.70[39] | 1.38[40] | -1.99[41] | 0.26[42] |
7 | POLE3 | DNA polymerase epsilon subunit 3 | [43] | -0.71[44] | -1.06[45] | -0.94[46] | -1.12[47] | 0.13[48] | -0.83[49] |
8 | POLE4 | DNA polymerase epsilon subunit 4 | [50] | -0.97[51] | -0.44[52] | -4.07[53] | -1.70[54] | -1.94[55] | -1.06[56] |
9 | MPG | DNA-3-methyladenine glycosylase | [57] | -0.60[58] | -0.08[59] | -1.34[60] | -2.39[61] | -1.62[62] | -0.76[63] |
10 | NTHL1 | Endonuclease III-like protein 1 | [64] | -1.13[65] | -0.93[66] | -1.84[67] | -2.34[68] | -2.32[69] | 0.32[70] |
11 | UNG | Uracil-DNA glycosylase | [71] | 0.59[72] | 0.34[73] | 0.59[74] | -1.18[75] | -0.20[76] | -0.35[77] |
12 | SMUG1 | Single-strand selective monofunctional uracil DNA glycosylase | [78] | -0.70[79] | -0.68[80] | -0.80[81] | -0.65[82] | -0.90[83] | 0.14[84] |
13 | POLB | DNA polymerase beta | [85] | -0.86[86] | -1.02[87] | -1.13[88] | -2.35[89] | -1.94[90] | -0.76[91] |
14 | PARP2 | Poly [ADP-ribose] polymerase 2 | [92] | 0.00[93] | -0.58[94] | 0.01[95] | -0.34[96] | 0.65[97] | -0.73[98] |
15 | FEN1 | Flap endonuclease 1 | [99] | 1.10[100] | 0.68[101] | 1.37[102] | 0.61[103] | 1.73[104] | -0.35[105] |
16 | NEIL2 | Endonuclease 8-like 2 | [106] | -1.15[107] | -1.43[108] | -2.08[109] | -3.06[110] | -2.79[111] | -0.29[112] |
17 | APEX2 | DNA-(apurinic or apyrimidinic site) lyase 2 | [113] | 0.60[114] | -0.51[115] | -0.88[116] | 0.05[117] | 0.13[118] | 0.05[119] |
18 | PNKP | Bifunctional polynucleotide phosphatase/kinase | [120] | -0.91[121] | -0.77[122] | 0.00[123] | -1.00[124] | -0.32[125] | 0.43[126] |
19 | MBD4 | Methyl-CpG-binding domain protein 4 | [127] | -0.63[128] | -0.11[129] | 0.15[130] | 0.30[131] | 1.29[132] | 1.51[133] |
20 | TDG | G/T mismatch-specific thymine DNA glycosylase | [134] | -0.25[135] | 0.58[136] | 0.14[137] | 1.45[138] | 1.04[139] | 0.66[140] |
21 | OGG1 | N-glycosylase/DNA lyase | [141] | 0.49[142] | 0.40[143] | 0.33[144] | -0.66[145] | -0.57[146] | 0.01[147] |
22 | XRCC1 | DNA repair protein XRCC1 | [148] | 0.71[149] | 0.69[150] | 1.60[151] | 0.70[152] | 0.90[153] | -0.18[154] |
23 | LIG3 | DNA ligase 3 | [155] | 1.25[156] | 1.09[157] | 1.99[158] | 1.01[159] | 0.28[160] | 1.61[161] |
24 | LIG1 | DNA ligase 1 | [162] | 1.71[163] | 1.52[164] | 1.98[165] | 0.44[166] | 1.40[167] | 0.37[168] |
25 | POLD1 | DNA polymerase delta catalytic subunit | [169] | 1.93[170] | 1.95[171] | 2.60[172] | 1.76[173] | 2.74[174] | 1.41[175] |
26 | POLL | DNA polymerase lambda | [176] | 1.07[177] | 1.81[178] | 2.20[179] | -0.02[180] | 0.79[181] | 0.98[182] |
27 | MUTYH | Adenine DNA glycosylase | [183] | 0.35[184] | 1.18[185] | 1.88[186] | -0.15[187] | 0.25[188] | 0.68[189] |
28 | POLD3 | DNA polymerase delta subunit 3 | [190] | 1.25[191] | 0.91[192] | 1.71[193] | 2.05[194] | 2.75[195] | 1.73[196] |
29 | POLE | DNA polymerase epsilon catalytic subunit A | [197] | 3.12[198] | 3.53[199] | 3.42[200] | 2.67[201] | 3.90[202] | 3.68[203] |
30 | POLE2 | DNA polymerase epsilon subunit 2 | [204] | 0.78[205] | 1.37[206] | 2.19[207] | 1.09[208] | 1.85[209] | -0.41[210] |
31 | NEIL3 | Endonuclease 8-like 3 | [211] | 2.51[212] | 2.57[213] | 3.59[214] | 4.22[215] | 4.54[216] | -0.51[217] |