WP_1Q211_COPY_NUMBER_VARIATION_SYNDROME Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 CTNNB1 Catenin beta-1 [1] 1.00[2] 0.30[3] 0.79[4] 0.41[5] 0.65[6] 0.33[7]
2 F11R Junctional adhesion molecule A [8] -0.06[9] 0.10[10] -0.97[11] -2.81[12] -1.65[13] -0.15[14]
3 FMO5 Dimethylaniline monooxygenase [N-oxide-forming] 5 [15] -4.04[16] -0.84[17] -3.29[18] -4.59[19] -8.80[20] 0.03[21]
4 TJP2 Tight junction protein ZO-2 [22] 0.80[23] 0.38[24] 0.16[25] -1.86[26] 0.72[27] -0.30[28]
5 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 [29] -2.04[30] -1.70[31] -1.98[32] -0.69[33] -0.97[34] -2.43[35]
6 PRKAG2 5'-AMP-activated protein kinase subunit gamma-2 [36] -4.68[37] -9.97[38] -3.93[39] -2.09[40] -1.93[41] -1.25[42]
7 CHD1L Chromodomain-helicase-DNA-binding protein 1-like [43] 0.48[44] 0.36[45] -0.39[46] 0.63[47] -0.72[48] -0.71[49]
8 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 [50] -0.70[51] 0.38[52] 1.50[53] 1.12[54] 1.40[55] 1.28[56]
9 PRKAB2 5'-AMP-activated protein kinase subunit beta-2 [57] 0.27[58] 1.25[59] 0.97[60] 0.68[61] -0.34[62] 0.63[63]
10 TJP1 Tight junction protein ZO-1 [64] -0.17[65] -0.14[66] -0.77[67] 1.35[68] 0.82[69] 1.05[70]
11 OCLN Occludin [71] -0.87[72] -0.11[73] -0.26[74] -2.48[75] -4.04[76] 0.92[77]
12 PRKAB1 5'-AMP-activated protein kinase subunit beta-1 [78] 0.09[79] 0.43[80] -0.82[81] -0.41[82] -0.29[83] -0.78[84]
13 PYGO2 Pygopus homolog 2 [85] 0.51[86] 0.42[87] 0.81[88] 1.57[89] 0.90[90] -0.78[91]
14 ACP6 Lysophosphatidic acid phosphatase type 6 [92] -0.58[93] -0.45[94] -0.82[95] 0.55[96] -0.95[97] -0.77[98]
15 TJP3 Tight junction protein ZO-3 [99] -2.61[100] 0.32[101] 1.78[102] -6.05[103] -6.16[104] -0.15[105]
16 GJA1 Gap junction alpha-1 protein [106] -3.47[107] -3.38[108] 3.45[109] 4.61[110] 4.71[111] -1.12[112]
17 BCL9 B-cell CLL/lymphoma 9 protein [113] 1.39[114] 0.97[115] 2.22[116] 3.71[117] 1.91[118] 0.43[119]
18 PRKAA2 5'-AMP-activated protein kinase catalytic subunit alpha-2 [120] 2.41[121] 2.66[122] 2.30[123] 2.69[124] 0.75[125] 1.07[126]
19 PRKAG3 5'-AMP-activated protein kinase subunit gamma-3 [127] -2.36[128] [129] -3.28[130] -1.36[131] [132] 2.35[133]
20 PYGO1 Pygopus homolog 1 [134] 0.54[135] [136] 0.84[137] 4.83[138] 5.11[139] -0.09[140]
21 GJA5 Gap junction alpha-5 protein [141] -2.37[142] [143] [144] 5.63[145] -3.25[146] 4.84[147]
22 GJA3 Gap junction alpha-3 protein [148] 1.98[149] -0.40[150] 1.44[151] 4.75[152] 3.32[153] -2.49[154]
23 AFDN Afadin [155] [156] [157] [158] [159] [160] [161]
24 GJA8 Gap junction alpha-8 protein [162] [163] [164] [165] [166] [167] [168]
25 NBPF12 Neuroblastoma breakpoint family member 12 [169] [170] [171] [172] [173] [174] [175]
26 LINC00624 [176] [177] [178] [179] [180] [181] [182]
27 KIRREL1 Kin of IRRE-like protein 1 [183] [184] [185] [186] [187] [188] [189]
28 AMELX Amelogenin, X isoform [190] [191] [192] [193] [194] [195] [196]
[1]
ref_hepatocyte CTNNB1
Mean 37.2
Standard deviation 16
Values 22 31 23 57 53
[2]
HepG2 CTNNB1
Mean 252
Standard deviation 27
Values 2.7e+02 2.3e+02
[3]
HepG2.C3A CTNNB1
Mean 158
Standard deviation 34
Values 1.8e+02 1.3e+02
[4]
HuH.7 CTNNB1
Mean 282
Standard deviation 64
Values 3.1e+02 2.1e+02 3.3e+02
[5]
SNU475 CTNNB1
Mean 115
Standard deviation 10
Values 1.1e+02 1.2e+02
[6]
THLE CTNNB1
Mean 151
Standard deviation 19
Values 1.4e+02 1.6e+02
[7]
liver CTNNB1
Mean 114
Standard deviation 15
Values 1.1e+02 1.3e+02 98 1.2e+02
[8]
ref_hepatocyte F11R
Mean 28.2
Standard deviation 10
Values 32 17 18 35 39
[9]
HepG2 F11R
Mean 91.7
Standard deviation 6.4
Values 87 96
[10]
HepG2.C3A F11R
Mean 105
Standard deviation 17
Values 93 1.2e+02
[11]
HuH.7 F11R
Mean 62.9
Standard deviation 1.8
Values 65 61 62
[12]
SNU475 F11R
Mean 9.41
Standard deviation 1.9
Values 8 11
[13]
THLE F11R
Mean 23.2
Standard deviation 1.7
Values 22 24
[14]
liver F11R
Mean 61.6
Standard deviation 22
Values 47 58 47 94
[15]
ref_hepatocyte FMO5
Mean 27.7
Standard deviation 35
Values 2.2 87 31 14 3.7
[16]
HepG2 FMO5
Mean 5.7
Standard deviation 2.6
Values 7.5 3.9
[17]
HepG2.C3A FMO5
Mean 53.5
Standard deviation 4.2
Values 51 56
[18]
HuH.7 FMO5
Mean 12.3
Standard deviation 5.7
Values 8.2 19 10
[19]
SNU475 FMO5
Mean 2.69
Standard deviation 2.5
Values 0.93 4.5
[20]
THLE FMO5
Mean 0.161
Standard deviation 0.048
Values 0.2 0.13
[21]
liver FMO5
Mean 68.6
Standard deviation 29
Values 71 48 1.1e+02 47
[22]
ref_hepatocyte TJP2
Mean 19
Standard deviation 9.8
Values 33 15 13 9.3 24
[23]
HepG2 TJP2
Mean 112
Standard deviation 32
Values 1.3e+02 89
[24]
HepG2.C3A TJP2
Mean 85.5
Standard deviation 5.7
Values 81 90
[25]
HuH.7 TJP2
Mean 92.6
Standard deviation 6.9
Values 88 90 1e+02
[26]
SNU475 TJP2
Mean 12.2
Standard deviation 0.49
Values 13 12
[27]
THLE TJP2
Mean 81
Standard deviation 22
Values 65 96
[28]
liver TJP2
Mean 37.6
Standard deviation 13
Values 51 44 35 21
[29]
ref_hepatocyte PRKAG1
Mean 18.2
Standard deviation 5.6
Values 21 14 20 11 25
[30]
HepG2 PRKAG1
Mean 15.1
Standard deviation 4.3
Values 18 12
[31]
HepG2.C3A PRKAG1
Mean 19.4
Standard deviation 1.6
Values 21 18
[32]
HuH.7 PRKAG1
Mean 20.2
Standard deviation 3.3
Values 19 24 18
[33]
SNU475 PRKAG1
Mean 26.4
Standard deviation 2
Values 25 28
[34]
THLE PRKAG1
Mean 24.2
Standard deviation 2.7
Values 22 26
[35]
liver PRKAG1
Mean 8.25
Standard deviation 1.9
Values 5.8 9 7.9 10
[36]
ref_hepatocyte PRKAG2
Mean 13.4
Standard deviation 15
Values 22 4.1 4.6 0.42 36
[37]
HepG2 PRKAG2
Mean 1.78
Standard deviation 0.11
Values 1.9 1.7
[38]
HepG2.C3A PRKAG2
Mean 0.0463
Standard deviation 0.01
Values 0.054 0.039
[39]
HuH.7 PRKAG2
Mean 3.84
Standard deviation 0.36
Values 4.3 3.7 3.6
[40]
SNU475 PRKAG2
Mean 7.37
Standard deviation 0.53
Values 7.7 7
[41]
THLE PRKAG2
Mean 9.12
Standard deviation 0.1
Values 9.2 9
[42]
liver PRKAG2
Mean 13.7
Standard deviation 5.4
Values 8.1 10 19 18
[43]
ref_hepatocyte CHD1L
Mean 11.8
Standard deviation 3.9
Values 11 7.7 9.6 17 14
[44]
HepG2 CHD1L
Mean 55.9
Standard deviation 8.9
Values 62 50
[45]
HepG2.C3A CHD1L
Mean 52.6
Standard deviation 8.2
Values 58 47
[46]
HuH.7 CHD1L
Mean 39.5
Standard deviation 8.7
Values 45 29 44
[47]
SNU475 CHD1L
Mean 42.7
Standard deviation 6.9
Values 38 48
[48]
THLE CHD1L
Mean 18.7
Standard deviation 2.7
Values 17 21
[49]
liver CHD1L
Mean 17.6
Standard deviation 3.4
Values 13 17 21 19
[50]
ref_hepatocyte PRKAA1
Mean 8.04
Standard deviation 3.4
Values 6.1 14 7.2 5.4 7.6
[51]
HepG2 PRKAA1
Mean 16.8
Standard deviation 2.1
Values 18 15
[52]
HepG2.C3A PRKAA1
Mean 36.3
Standard deviation 5.5
Values 40 32
[53]
HuH.7 PRKAA1
Mean 99.5
Standard deviation 14
Values 84 1e+02 1.1e+02
[54]
SNU475 PRKAA1
Mean 40.7
Standard deviation 4.8
Values 37 44
[55]
THLE PRKAA1
Mean 55.1
Standard deviation 6.9
Values 60 50
[56]
liver PRKAA1
Mean 47.6
Standard deviation 7.3
Values 47 58 40 45
[57]
ref_hepatocyte PRKAB2
Mean 7.76
Standard deviation 2.5
Values 8.8 7.4 4.5 11 6.7
[58]
HepG2 PRKAB2
Mean 31.7
Standard deviation 10
Values 39 25
[59]
HepG2.C3A PRKAB2
Mean 64.2
Standard deviation 12
Values 56 73
[60]
HuH.7 PRKAB2
Mean 66.5
Standard deviation 35
Values 46 1.1e+02 47
[61]
SNU475 PRKAB2
Mean 29
Standard deviation 6.7
Values 24 34
[62]
THLE PRKAB2
Mean 15.9
Standard deviation 0.88
Values 17 15
[63]
liver PRKAB2
Mean 29.3
Standard deviation 1.5
Values 28 30 28 31
[64]
ref_hepatocyte TJP1
Mean 6.57
Standard deviation 4.1
Values 11 3.3 2.4 5.2 11
[65]
HepG2 TJP1
Mean 19.9
Standard deviation 4
Values 23 17
[66]
HepG2.C3A TJP1
Mean 20.6
Standard deviation 0.78
Values 20 21
[67]
HuH.7 TJP1
Mean 16.9
Standard deviation 3.9
Values 12 19 20
[68]
SNU475 TJP1
Mean 39.2
Standard deviation 8.2
Values 33 45
[69]
THLE TJP1
Mean 30.2
Standard deviation 3.4
Values 28 33
[70]
liver TJP1
Mean 33.2
Standard deviation 3.8
Values 28 37 32 36
[71]
ref_hepatocyte OCLN
Mean 5.8
Standard deviation 2.3
Values 7.5 8.5 3.9 3.1 6.1
[72]
HepG2 OCLN
Mean 10.8
Standard deviation 0.48
Values 11 10
[73]
HepG2.C3A OCLN
Mean 18.7
Standard deviation 7
Values 14 24
[74]
HuH.7 OCLN
Mean 21.2
Standard deviation 6.1
Values 17 28 18
[75]
SNU475 OCLN
Mean 2.44
Standard deviation 0.28
Values 2.2 2.6
[76]
THLE OCLN
Mean 0.918
Standard deviation 0.27
Values 1.1 0.72
[77]
liver OCLN
Mean 26.7
Standard deviation 1.2
Values 26 26 28 26
[78]
ref_hepatocyte PRKAB1
Mean 4.81
Standard deviation 1.6
Values 4.2 6.9 5.3 2.5 5.1
[79]
HepG2 PRKAB1
Mean 17.4
Standard deviation 1
Values 17 18
[80]
HepG2.C3A PRKAB1
Mean 22.4
Standard deviation 1.5
Values 21 23
[81]
HuH.7 PRKAB1
Mean 11.9
Standard deviation 0.19
Values 12 12 12
[82]
SNU475 PRKAB1
Mean 8.43
Standard deviation 1.5
Values 7.4 9.5
[83]
THLE PRKAB1
Mean 10.2
Standard deviation 0.44
Values 9.9 10
[84]
liver PRKAB1
Mean 6.83
Standard deviation 3.2
Values 4 4.5 7.9 11
[85]
ref_hepatocyte PYGO2
Mean 4.04
Standard deviation 1.1
Values 3.8 5.1 4.6 4.5 2.2
[86]
HepG2 PYGO2
Mean 19.5
Standard deviation 2
Values 21 18
[87]
HepG2.C3A PYGO2
Mean 18.7
Standard deviation 3.4
Values 16 21
[88]
HuH.7 PYGO2
Mean 31
Standard deviation 7.7
Values 37 22 34
[89]
SNU475 PYGO2
Mean 28
Standard deviation 3.2
Values 26 30
[90]
THLE PYGO2
Mean 19.6
Standard deviation 0.83
Values 19 20
[91]
liver PYGO2
Mean 5.71
Standard deviation 2.1
Values 4.7 3.3 7.4 7.5
[92]
ref_hepatocyte ACP6
Mean 3.4
Standard deviation 2.4
Values 1.3 5.1 6.8 2.4 1.4
[93]
HepG2 ACP6
Mean 7.74
Standard deviation 0.48
Values 8.1 7.4
[94]
HepG2.C3A ACP6
Mean 8.64
Standard deviation 0.85
Values 8 9.2
[95]
HuH.7 ACP6
Mean 8.44
Standard deviation 1.4
Values 10 7.2 8.1
[96]
SNU475 ACP6
Mean 11.7
Standard deviation 0.92
Values 12 11
[97]
THLE ACP6
Mean 4.56
Standard deviation 0.43
Values 4.3 4.9
[98]
liver ACP6
Mean 4.87
Standard deviation 1.7
Values 4.2 3.2 7.3 4.9
[99]
ref_hepatocyte TJP3
Mean 2.02
Standard deviation 1.3
Values 0.78 2.8 3.8 1.9 0.74
[100]
HepG2 TJP3
Mean 1.12
Standard deviation 0.49
Values 1.5 0.78
[101]
HepG2.C3A TJP3
Mean 8.72
Standard deviation 2
Values 7.3 10
[102]
HuH.7 TJP3
Mean 30.4
Standard deviation 0.21
Values 31 30 30
[103]
SNU475 TJP3
Mean 0.0711
Standard deviation 0.028
Values 0.091 0.051
[104]
THLE TJP3
Mean 0.073
Standard deviation 0.0055
Values 0.077 0.069
[105]
liver TJP3
Mean 4.43
Standard deviation 0.86
Values 3.3 5.1 5.1 4.2
[106]
ref_hepatocyte GJA1
Mean 0.931
Standard deviation 1.5
Values 3.6 0.98 0.052 0 0.036
[107]
HepG2 GJA1
Mean 0.285
Standard deviation 0.0024
Values 0.28 0.29
[108]
HepG2.C3A GJA1
Mean 0.31
Standard deviation 0.029
Values 0.29 0.33
[109]
HuH.7 GJA1
Mean 44.5
Standard deviation 9.8
Values 52 33 48
[110]
SNU475 GJA1
Mean 53.2
Standard deviation 4.6
Values 50 56
[111]
THLE GJA1
Mean 63.1
Standard deviation 13
Values 54 72
[112]
liver GJA1
Mean 1.04
Standard deviation 0.55
Values 1.4 1.6 0.54 0.62
[113]
ref_hepatocyte BCL9
Mean 0.849
Standard deviation 0.58
Values 1.8 0.88 0.62 0.45 0.46
[114]
HepG2 BCL9
Mean 7.54
Standard deviation 0.81
Values 7 8.1
[115]
HepG2.C3A BCL9
Mean 5.75
Standard deviation 0.025
Values 5.8 5.7
[116]
HuH.7 BCL9
Mean 17.3
Standard deviation 3.4
Values 14 16 21
[117]
SNU475 BCL9
Mean 26
Standard deviation 0.97
Values 25 27
[118]
THLE BCL9
Mean 8.29
Standard deviation 1.9
Values 6.9 9.7
[119]
liver BCL9
Mean 2.79
Standard deviation 0.22
Values 2.7 2.6 2.7 3.1
[120]
ref_hepatocyte PRKAA2
Mean 0.754
Standard deviation 0.84
Values 0.23 0.24 0.1 2 1.2
[121]
HepG2 PRKAA2
Mean 13.6
Standard deviation 4
Values 16 11
[122]
HepG2.C3A PRKAA2
Mean 16.6
Standard deviation 1.4
Values 18 16
[123]
HuH.7 PRKAA2
Mean 16.2
Standard deviation 6.6
Values 9.7 23 16
[124]
SNU475 PRKAA2
Mean 11.4
Standard deviation 0.77
Values 11 12
[125]
THLE PRKAA2
Mean 3.29
Standard deviation 0.6
Values 3.7 2.9
[126]
liver PRKAA2
Mean 3.87
Standard deviation 1.2
Values 5 4 4.3 2.2
[127]
ref_hepatocyte PRKAG3
Mean 0.013
Standard deviation 0.029
Values 0 0.065 0 0 0
[128]
HepG2 PRKAG3
Mean 0.0086
Standard deviation 0.012
Values 0 0.017
[129]
HepG2.C3A PRKAG3
Mean 0
Standard deviation 0
Values 0 0
[130]
HuH.7 PRKAG3
Mean 0.00586
Standard deviation 0.0051
Values 0.0094 0 0.0082
[131]
SNU475 PRKAG3
Mean 0.0118
Standard deviation 0.0095
Values 0.0051 0.019
[132]
THLE PRKAG3
Mean 0
Standard deviation 0
Values 0 0
[133]
liver PRKAG3
Mean 0.161
Standard deviation 0.27
Values 0.57 0.029 0.047 0
[134]
ref_hepatocyte PYGO1
Mean 0.013
Standard deviation 0.029
Values 0 0.065 0 0 0
[135]
HepG2 PYGO1
Mean 0.0644
Standard deviation 0.067
Values 0.11 0.017
[136]
HepG2.C3A PYGO1
Mean 0
Standard deviation 0
Values 0 0
[137]
HuH.7 PYGO1
Mean 0.102
Standard deviation 0.062
Values 0.056 0.077 0.17
[138]
SNU475 PYGO1
Mean 0.866
Standard deviation 0.18
Values 0.74 0.99
[139]
THLE PYGO1
Mean 1.17
Standard deviation 0.075
Values 1.1 1.2
[140]
liver PYGO1
Mean 0.0298
Standard deviation 0.035
Values 0.079 0.014 0 0.026
[141]
ref_hepatocyte GJA5
Mean 0.00978
Standard deviation 0.022
Values 0.049 0 0 0 0
[142]
HepG2 GJA5
Mean 0.00643
Standard deviation 0.0091
Values 0.013 0
[143]
HepG2.C3A GJA5
Mean 0
Standard deviation 0
Values 0 0
[144]
HuH.7 GJA5
Mean 0
Standard deviation 0
Values 0 0 0
[145]
SNU475 GJA5
Mean 1.14
Standard deviation 0.078
Values 1.2 1.1
[146]
THLE GJA5
Mean 0.00266
Standard deviation 0.0038
Values 0 0.0053
[147]
liver GJA5
Mean 0.682
Standard deviation 0.32
Values 0.61 0.26 0.99 0.87
[148]
ref_hepatocyte GJA3
Mean 0.00761
Standard deviation 0.017
Values 0.038 0 0 0 0
[149]
HepG2 GJA3
Mean 0.102
Standard deviation 0.059
Values 0.06 0.14
[150]
HepG2.C3A GJA3
Mean 0.0199
Standard deviation 0.013
Values 0.011 0.029
[151]
HuH.7 GJA3
Mean 0.0904
Standard deviation 0.025
Values 0.066 0.12 0.09
[152]
SNU475 GJA3
Mean 0.477
Standard deviation 0.066
Values 0.43 0.52
[153]
THLE GJA3
Mean 0.197
Standard deviation 0.053
Values 0.16 0.23
[154]
liver GJA3
Mean 0.00331
Standard deviation 0.0066
Values 0.013 0 0 0
[155]
ref_hepatocyte AFDN
Missing
[156]
HepG2 AFDN
Missing
[157]
HepG2.C3A AFDN
Missing
[158]
HuH.7 AFDN
Missing
[159]
SNU475 AFDN
Missing
[160]
THLE AFDN
Missing
[161]
liver AFDN
Missing
[162]
ref_hepatocyte GJA8
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[163]
HepG2 GJA8
Mean 0
Standard deviation 0
Values 0 0
[164]
HepG2.C3A GJA8
Mean 0.0146
Standard deviation 0.021
Values 0 0.029
[165]
HuH.7 GJA8
Mean 0
Standard deviation 0
Values 0 0 0
[166]
SNU475 GJA8
Mean 0.00485
Standard deviation 0.0003
Values 0.0051 0.0046
[167]
THLE GJA8
Mean 0
Standard deviation 0
Values 0 0
[168]
liver GJA8
Mean 0
Standard deviation 0
Values 0 0 0 0
[169]
ref_hepatocyte NBPF12
Missing
[170]
HepG2 NBPF12
Missing
[171]
HepG2.C3A NBPF12
Missing
[172]
HuH.7 NBPF12
Missing
[173]
SNU475 NBPF12
Missing
[174]
THLE NBPF12
Missing
[175]
liver NBPF12
Missing
[176]
ref_hepatocyte LINC00624
Missing
[177]
HepG2 LINC00624
Mean 0.0215
Standard deviation 0.018
Values 0.0086 0.034
[178]
HepG2.C3A LINC00624
Mean 0.0151
Standard deviation 0.0062
Values 0.011 0.019
[179]
HuH.7 LINC00624
Mean 0.556
Standard deviation 0.088
Values 0.66 0.49 0.52
[180]
SNU475 LINC00624
Mean 0.0344
Standard deviation 0.016
Values 0.046 0.023
[181]
THLE LINC00624
Mean 0.00296
Standard deviation 0.0042
Values 0.0059 0
[182]
liver LINC00624
Mean 0.0352
Standard deviation 0.035
Values 0.079 0.014 0.047 0
[183]
ref_hepatocyte KIRREL1
Missing
[184]
HepG2 KIRREL1
Missing
[185]
HepG2.C3A KIRREL1
Missing
[186]
HuH.7 KIRREL1
Missing
[187]
SNU475 KIRREL1
Missing
[188]
THLE KIRREL1
Missing
[189]
liver KIRREL1
Missing
[190]
ref_hepatocyte AMELX
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[191]
HepG2 AMELX
Mean 0
Standard deviation 0
Values 0 0
[192]
HepG2.C3A AMELX
Mean 0
Standard deviation 0
Values 0 0
[193]
HuH.7 AMELX
Mean 0
Standard deviation 0
Values 0 0 0
[194]
SNU475 AMELX
Mean 0
Standard deviation 0
Values 0 0
[195]
THLE AMELX
Mean 0.00798
Standard deviation 0.011
Values 0 0.016
[196]
liver AMELX
Mean 0.00357
Standard deviation 0.0071
Values 0 0.014 0 0