REACTOME_MRNA_EDITING_C_TO_U_CONVERSION Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 A1CF APOBEC1 complementation factor [1] 0.06[2] 0.57[3] 0.75[4] -4.33[5] -5.89[6] 0.73[7]
2 APOBEC3B DNA dC->dU-editing enzyme APOBEC-3B [8] -1.90[9] -3.39[10] -11.62[11] 0.11[12] -0.10[13] -8.25[14]
3 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C [15] 1.82[16] 0.01[17] -7.22[18] 2.91[19] 3.06[20] -3.59[21]
4 APOBEC3A DNA dC->dU-editing enzyme APOBEC-3A [22] -4.13[23] -5.28[24] -3.71[25] -1.58[26] -2.71[27] -2.39[28]
5 APOBEC3H DNA dC->dU-editing enzyme APOBEC-3H [29] -3.49[30] -5.12[31] -8.99[32] -2.69[33] -1.86[34] -5.55[35]
6 APOBEC2 C->U-editing enzyme APOBEC-2 [36] -0.44[37] 0.76[38] 0.58[39] 1.84[40] 0.13[41] 2.07[42]
7 APOBEC4 Putative C->U-editing enzyme APOBEC-4 [43] [44] [45] [46] [47] [48] [49]
8 APOBEC1 C->U-editing enzyme APOBEC-1 [50] [51] [52] [53] [54] [55] [56]
[1]
ref_hepatocyte A1CF
Mean 9.64
Standard deviation 8.1
Values 7.9 5.3 1.7 10 23
[2]
HepG2 A1CF
Mean 36.8
Standard deviation 13
Values 28 46
[3]
HepG2.C3A A1CF
Mean 101
Standard deviation 15
Values 91 1.1e+02
[4]
HuH.7 A1CF
Mean 99.2
Standard deviation 32
Values 1.1e+02 1.3e+02 64
[5]
SNU475 A1CF
Mean 0.324
Standard deviation 0.11
Values 0.4 0.25
[6]
THLE A1CF
Mean 0.151
Standard deviation 0.0034
Values 0.15 0.15
[7]
liver A1CF
Mean 208
Standard deviation 61
Values 2.9e+02 1.9e+02 1.4e+02 2e+02
[8]
ref_hepatocyte APOBEC3B
Mean 4.7
Standard deviation 7.6
Values 1.8 2.8 18 0.59 0.12
[9]
HepG2 APOBEC3B
Mean 4.62
Standard deviation 0.37
Values 4.9 4.4
[10]
HepG2.C3A APOBEC3B
Mean 3.16
Standard deviation 2.1
Values 1.7 4.6
[11]
HuH.7 APOBEC3B
Mean 0.00915
Standard deviation 0.0097
Values 0.0082 0.019 0
[12]
SNU475 APOBEC3B
Mean 3.42
Standard deviation 0.53
Values 3.8 3
[13]
THLE APOBEC3B
Mean 4.07
Standard deviation 1.7
Values 2.9 5.3
[14]
liver APOBEC3B
Mean 0.201
Standard deviation 0.16
Values 0.28 0.071 0.39 0.066
[15]
ref_hepatocyte APOBEC3C
Mean 1.39
Standard deviation 2.2
Values 5.3 0 0.67 0.13 0.89
[16]
HepG2 APOBEC3C
Mean 18
Standard deviation 3
Values 20 16
[17]
HepG2.C3A APOBEC3C
Mean 9.88
Standard deviation 3.3
Values 7.5 12
[18]
HuH.7 APOBEC3C
Mean 0.0574
Standard deviation 0.058
Values 0.041 0.12 0.0094
[19]
SNU475 APOBEC3C
Mean 7.06
Standard deviation 1.3
Values 8 6.1
[20]
THLE APOBEC3C
Mean 10.7
Standard deviation 3.2
Values 8.5 13
[21]
liver APOBEC3C
Mean 1.51
Standard deviation 1.5
Values 2.9 0.11 2.8 0.25
[22]
ref_hepatocyte APOBEC3A
Mean 0.312
Standard deviation 0.3
Values 0.033 0.24 0.79 0.095 0.4
[23]
HepG2 APOBEC3A
Mean 0.0652
Standard deviation 0.038
Values 0.092 0.039
[24]
HepG2.C3A APOBEC3A
Mean 0.0565
Standard deviation 0.011
Values 0.049 0.064
[25]
HuH.7 APOBEC3A
Mean 0.146
Standard deviation 0.021
Values 0.16 0.12 0.16
[26]
SNU475 APOBEC3A
Mean 0.0703
Standard deviation 0.00099
Values 0.07 0.071
[27]
THLE APOBEC3A
Mean 0.0443
Standard deviation 0.013
Values 0.035 0.053
[28]
liver APOBEC3A
Mean 0.779
Standard deviation 0.16
Values 1 0.71 0.74 0.65
[29]
ref_hepatocyte APOBEC3H
Mean 0.177
Standard deviation 0.16
Values 0 0.34 0 0.28 0.27
[30]
HepG2 APOBEC3H
Mean 0.058
Standard deviation 0.009
Values 0.052 0.064
[31]
HepG2.C3A APOBEC3H
Mean 0.036
Standard deviation 0.0097
Values 0.029 0.043
[32]
HuH.7 APOBEC3H
Mean 0.00214
Standard deviation 0.0037
Values 0 0.0064 0
[33]
SNU475 APOBEC3H
Mean 0.0186
Standard deviation 0.026
Values 0.037 0
[34]
THLE APOBEC3H
Mean 0.0452
Standard deviation 0.011
Values 0.053 0.037
[35]
liver APOBEC3H
Mean 0.0494
Standard deviation 0.05
Values 0.12 0.029 0.051 0
[36]
ref_hepatocyte APOBEC2
Mean 0.0195
Standard deviation 0.044
Values 0 0 0 0 0.098
[37]
HepG2 APOBEC2
Mean 0.053
Standard deviation 0.014
Values 0.063 0.043
[38]
HepG2.C3A APOBEC2
Mean 0.233
Standard deviation 0.095
Values 0.17 0.3
[39]
HuH.7 APOBEC2
Mean 0.179
Standard deviation 0.047
Values 0.13 0.18 0.22
[40]
SNU475 APOBEC2
Mean 0.047
Standard deviation 0.045
Values 0.079 0.015
[41]
THLE APOBEC2
Mean 0.0198
Standard deviation 0.0054
Values 0.024 0.016
[42]
liver APOBEC2
Mean 1.07
Standard deviation 0.48
Values 1.4 0.73 0.59 1.5
[43]
ref_hepatocyte APOBEC4
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[44]
HepG2 APOBEC4
Mean 0
Standard deviation 0
Values 0 0
[45]
HepG2.C3A APOBEC4
Mean 0
Standard deviation 0
Values 0 0
[46]
HuH.7 APOBEC4
Mean 0.00273
Standard deviation 0.0047
Values 0.0082 0 0
[47]
SNU475 APOBEC4
Mean 0.00232
Standard deviation 0.0033
Values 0.0046 0
[48]
THLE APOBEC4
Mean 0
Standard deviation 0
Values 0 0
[49]
liver APOBEC4
Mean 0.191
Standard deviation 0.24
Values 0.024 0.53 0 0.21
[50]
ref_hepatocyte APOBEC1
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[51]
HepG2 APOBEC1
Mean 0.0186
Standard deviation 0.014
Values 0.029 0.0086
[52]
HepG2.C3A APOBEC1
Mean 0.0102
Standard deviation 0.00071
Values 0.0097 0.011
[53]
HuH.7 APOBEC1
Mean 0
Standard deviation 0
Values 0 0 0
[54]
SNU475 APOBEC1
Mean 0
Standard deviation 0
Values 0 0
[55]
THLE APOBEC1
Mean 0
Standard deviation 0
Values 0 0
[56]
liver APOBEC1
Mean 0
Standard deviation 0
Values 0 0 0 0