REACTOME_MRNA_EDITING Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 ADAR Double-stranded RNA-specific adenosine deaminase [1] 0.40[2] -0.35[3] 0.51[4] 1.05[5] 0.74[6] -0.58[7]
2 A1CF APOBEC1 complementation factor [8] -0.56[9] 0.76[10] 0.15[11] -7.50[12] -8.38[13] 1.08[14]
3 APOBEC3B DNA dC->dU-editing enzyme APOBEC-3B [15] -2.52[16] -3.21[17] -12.22[18] -3.06[19] -2.59[20] -7.90[21]
4 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C [22] 1.20[23] 0.19[24] -7.82[25] -0.26[26] 0.56[27] -3.23[28]
5 ADARB1 Double-stranded RNA-specific editase 1 [29] 1.85[30] 1.24[31] -0.56[32] 0.09[33] 3.28[34] -0.16[35]
6 APOBEC3A DNA dC->dU-editing enzyme APOBEC-3A [36] -4.75[37] -5.10[38] -4.31[39] -4.75[40] -5.20[41] -2.03[42]
7 APOBEC3H DNA dC->dU-editing enzyme APOBEC-3H [43] -4.11[44] -4.94[45] -9.59[46] -5.86[47] -4.36[48] -5.20[49]
8 APOBEC2 C->U-editing enzyme APOBEC-2 [50] -1.05[51] 0.94[52] -0.02[53] -1.34[54] -2.37[55] 2.43[56]
9 APOBEC1 C->U-editing enzyme APOBEC-1 [57] [58] [59] [60] [61] [62] [63]
10 APOBEC4 Putative C->U-editing enzyme APOBEC-4 [64] [65] [66] [67] [68] [69] [70]
[1]
ref_hepatocyte ADAR
Mean 13.5
Standard deviation 3.3
Values 12 10 18 11 16
[2]
HepG2 ADAR
Mean 100
Standard deviation 9.1
Values 94 1.1e+02
[3]
HepG2.C3A ADAR
Mean 65.9
Standard deviation 2.9
Values 68 64
[4]
HuH.7 ADAR
Mean 178
Standard deviation 35
Values 2.2e+02 1.6e+02 1.6e+02
[5]
SNU475 ADAR
Mean 170
Standard deviation 30
Values 1.9e+02 1.5e+02
[6]
THLE ADAR
Mean 118
Standard deviation 22
Values 1e+02 1.3e+02
[7]
liver ADAR
Mean 92.2
Standard deviation 6
Values 99 93 92 84
[8]
ref_hepatocyte A1CF
Mean 9.64
Standard deviation 8.1
Values 7.9 5.3 1.7 10 23
[9]
HepG2 A1CF
Mean 36.8
Standard deviation 13
Values 28 46
[10]
HepG2.C3A A1CF
Mean 101
Standard deviation 15
Values 91 1.1e+02
[11]
HuH.7 A1CF
Mean 99.2
Standard deviation 32
Values 1.1e+02 1.3e+02 64
[12]
SNU475 A1CF
Mean 0.324
Standard deviation 0.11
Values 0.4 0.25
[13]
THLE A1CF
Mean 0.151
Standard deviation 0.0034
Values 0.15 0.15
[14]
liver A1CF
Mean 208
Standard deviation 61
Values 2.9e+02 1.9e+02 1.4e+02 2e+02
[15]
ref_hepatocyte APOBEC3B
Mean 4.7
Standard deviation 7.6
Values 1.8 2.8 18 0.59 0.12
[16]
HepG2 APOBEC3B
Mean 4.62
Standard deviation 0.37
Values 4.9 4.4
[17]
HepG2.C3A APOBEC3B
Mean 3.16
Standard deviation 2.1
Values 1.7 4.6
[18]
HuH.7 APOBEC3B
Mean 0.00915
Standard deviation 0.0097
Values 0.0082 0.019 0
[19]
SNU475 APOBEC3B
Mean 3.42
Standard deviation 0.53
Values 3.8 3
[20]
THLE APOBEC3B
Mean 4.07
Standard deviation 1.7
Values 2.9 5.3
[21]
liver APOBEC3B
Mean 0.201
Standard deviation 0.16
Values 0.28 0.071 0.39 0.066
[22]
ref_hepatocyte APOBEC3C
Mean 1.39
Standard deviation 2.2
Values 5.3 0 0.67 0.13 0.89
[23]
HepG2 APOBEC3C
Mean 18
Standard deviation 3
Values 20 16
[24]
HepG2.C3A APOBEC3C
Mean 9.88
Standard deviation 3.3
Values 7.5 12
[25]
HuH.7 APOBEC3C
Mean 0.0574
Standard deviation 0.058
Values 0.041 0.12 0.0094
[26]
SNU475 APOBEC3C
Mean 7.06
Standard deviation 1.3
Values 8 6.1
[27]
THLE APOBEC3C
Mean 10.7
Standard deviation 3.2
Values 8.5 13
[28]
liver APOBEC3C
Mean 1.51
Standard deviation 1.5
Values 2.9 0.11 2.8 0.25
[29]
ref_hepatocyte ADARB1
Mean 0.499
Standard deviation 0.44
Values 1 0.085 0 0.7 0.67
[30]
HepG2 ADARB1
Mean 10.1
Standard deviation 0.35
Values 9.9 10
[31]
HepG2.C3A ADARB1
Mean 7.34
Standard deviation 0.52
Values 7.7 7
[32]
HuH.7 ADARB1
Mean 3.15
Standard deviation 0.57
Values 3.5 3.4 2.5
[33]
SNU475 ADARB1
Mean 3.24
Standard deviation 0.89
Values 2.6 3.9
[34]
THLE ADARB1
Mean 25.3
Standard deviation 2.5
Values 27 24
[35]
liver ADARB1
Mean 4.57
Standard deviation 2.6
Values 2.7 6.4 2 7.2
[36]
ref_hepatocyte APOBEC3A
Mean 0.312
Standard deviation 0.3
Values 0.033 0.24 0.79 0.095 0.4
[37]
HepG2 APOBEC3A
Mean 0.0652
Standard deviation 0.038
Values 0.092 0.039
[38]
HepG2.C3A APOBEC3A
Mean 0.0565
Standard deviation 0.011
Values 0.049 0.064
[39]
HuH.7 APOBEC3A
Mean 0.146
Standard deviation 0.021
Values 0.16 0.12 0.16
[40]
SNU475 APOBEC3A
Mean 0.0703
Standard deviation 0.00099
Values 0.07 0.071
[41]
THLE APOBEC3A
Mean 0.0443
Standard deviation 0.013
Values 0.035 0.053
[42]
liver APOBEC3A
Mean 0.779
Standard deviation 0.16
Values 1 0.71 0.74 0.65
[43]
ref_hepatocyte APOBEC3H
Mean 0.177
Standard deviation 0.16
Values 0 0.34 0 0.28 0.27
[44]
HepG2 APOBEC3H
Mean 0.058
Standard deviation 0.009
Values 0.052 0.064
[45]
HepG2.C3A APOBEC3H
Mean 0.036
Standard deviation 0.0097
Values 0.029 0.043
[46]
HuH.7 APOBEC3H
Mean 0.00214
Standard deviation 0.0037
Values 0 0.0064 0
[47]
SNU475 APOBEC3H
Mean 0.0186
Standard deviation 0.026
Values 0.037 0
[48]
THLE APOBEC3H
Mean 0.0452
Standard deviation 0.011
Values 0.053 0.037
[49]
liver APOBEC3H
Mean 0.0494
Standard deviation 0.05
Values 0.12 0.029 0.051 0
[50]
ref_hepatocyte APOBEC2
Mean 0.0195
Standard deviation 0.044
Values 0 0 0 0 0.098
[51]
HepG2 APOBEC2
Mean 0.053
Standard deviation 0.014
Values 0.063 0.043
[52]
HepG2.C3A APOBEC2
Mean 0.233
Standard deviation 0.095
Values 0.17 0.3
[53]
HuH.7 APOBEC2
Mean 0.179
Standard deviation 0.047
Values 0.13 0.18 0.22
[54]
SNU475 APOBEC2
Mean 0.047
Standard deviation 0.045
Values 0.079 0.015
[55]
THLE APOBEC2
Mean 0.0198
Standard deviation 0.0054
Values 0.024 0.016
[56]
liver APOBEC2
Mean 1.07
Standard deviation 0.48
Values 1.4 0.73 0.59 1.5
[57]
ref_hepatocyte APOBEC1
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[58]
HepG2 APOBEC1
Mean 0.0186
Standard deviation 0.014
Values 0.029 0.0086
[59]
HepG2.C3A APOBEC1
Mean 0.0102
Standard deviation 0.00071
Values 0.0097 0.011
[60]
HuH.7 APOBEC1
Mean 0
Standard deviation 0
Values 0 0 0
[61]
SNU475 APOBEC1
Mean 0
Standard deviation 0
Values 0 0
[62]
THLE APOBEC1
Mean 0
Standard deviation 0
Values 0 0
[63]
liver APOBEC1
Mean 0
Standard deviation 0
Values 0 0 0 0
[64]
ref_hepatocyte APOBEC4
Mean 0
Standard deviation 0
Values 0 0 0 0 0
[65]
HepG2 APOBEC4
Mean 0
Standard deviation 0
Values 0 0
[66]
HepG2.C3A APOBEC4
Mean 0
Standard deviation 0
Values 0 0
[67]
HuH.7 APOBEC4
Mean 0.00273
Standard deviation 0.0047
Values 0.0082 0 0
[68]
SNU475 APOBEC4
Mean 0.00232
Standard deviation 0.0033
Values 0.0046 0
[69]
THLE APOBEC4
Mean 0
Standard deviation 0
Values 0 0
[70]
liver APOBEC4
Mean 0.191
Standard deviation 0.24
Values 0.024 0.53 0 0.21