REACTOME_HIV_TRANSCRIPTION_INITIATION Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5 [1] -2.03[2] -2.16[3] -2.44[4] -1.64[5] -1.85[6] -0.47[7]
2 TAF9 Transcription initiation factor TFIID subunit 9 [8] -0.68[9] -0.03[10] -0.55[11] -0.68[12] -0.59[13] -0.29[14]
3 POLR2J DNA-directed RNA polymerase II subunit RPB11-a [15] -2.73[16] -2.56[17] -2.32[18] -2.86[19] -2.69[20] -2.22[21]
4 TAF10 Transcription initiation factor TFIID subunit 10 [22] -1.32[23] -1.69[24] -1.19[25] -1.21[26] -2.01[27] -1.76[28]
5 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 [29] 1.05[30] 0.88[31] 0.92[32] 0.00[33] 0.71[34] 1.35[35]
6 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 [36] -1.13[37] -0.63[38] -0.70[39] -2.11[40] -1.58[41] -1.09[42]
7 TAF7 Transcription initiation factor TFIID subunit 7 [43] 0.32[44] 0.45[45] 0.16[46] 0.44[47] 0.34[48] 0.08[49]
8 TAF13 Transcription initiation factor TFIID subunit 13 [50] -2.82[51] -3.07[52] -4.03[53] -2.18[54] -2.43[55] -3.36[56]
9 POLR2F DNA-directed RNA polymerases I, II, and III subunit RPABC2 [57] -0.83[58] -0.71[59] -1.57[60] -2.04[61] -1.45[62] -0.20[63]
10 POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4 [64] -1.15[65] -0.42[66] -0.57[67] -0.39[68] -0.64[69] -0.41[70]
11 POLR2G DNA-directed RNA polymerase II subunit RPB7 [71] -0.72[72] -0.56[73] -1.11[74] -0.59[75] -0.87[76] -0.96[77]
12 TAF15 TATA-binding protein-associated factor 2N [78] 0.58[79] -0.16[80] 0.67[81] 0.72[82] 0.98[83] -1.27[84]
13 GTF2F2 General transcription factor IIF subunit 2 [85] -1.51[86] -0.99[87] -0.72[88] -1.56[89] -1.48[90] -1.72[91]
14 POLR2C DNA-directed RNA polymerase II subunit RPB3 [92] 1.26[93] 1.25[94] 0.70[95] 0.32[96] 0.40[97] 0.41[98]
15 GTF2E2 Transcription initiation factor IIE subunit beta [99] -0.02[100] -0.33[101] 0.03[102] -0.33[103] -0.77[104] -0.53[105]
16 CCNH Cyclin-H [106] -1.23[107] -0.49[108] -1.15[109] -1.22[110] 0.02[111] -0.06[112]
17 POLR2I DNA-directed RNA polymerase II subunit RPB9 [113] -1.15[114] -1.14[115] -1.27[116] -1.71[117] -1.78[118] -0.16[119]
18 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit [120] 0.33[121] 0.46[122] -0.18[123] 0.11[124] 0.41[125] 0.17[126]
19 GTF2F1 General transcription factor IIF subunit 1 [127] 0.83[128] 0.30[129] 1.73[130] 0.17[131] 0.52[132] -0.40[133]
20 TAF11 Transcription initiation factor TFIID subunit 11 [134] -0.15[135] 0.01[136] -0.76[137] 0.29[138] -0.44[139] -1.07[140]
21 TAF12 Transcription initiation factor TFIID subunit 12 [141] -1.20[142] -1.47[143] -0.49[144] -0.69[145] -1.14[146] -0.81[147]
22 GTF2A2 Transcription initiation factor IIA subunit 2 [148] -0.01[149] -0.17[150] -0.57[151] 0.60[152] 0.74[153] 0.01[154]
23 CDK7 Cyclin-dependent kinase 7 [155] -0.21[156] 0.69[157] 0.36[158] -0.01[159] -0.48[160] -1.49[161]
24 GTF2B Transcription initiation factor IIB [162] -0.65[163] -0.30[164] -0.37[165] -0.47[166] -0.56[167] 0.01[168]
25 POLR2B DNA-directed RNA polymerase II subunit RPB2 [169] 1.66[170] 1.92[171] 1.81[172] 1.67[173] 2.22[174] 1.82[175]
26 GTF2H2 General transcription factor IIH subunit 2 [176] -4.96[177] -4.14[178] -4.39[179] -4.62[180] -6.02[181] -3.81[182]
27 POLR2D DNA-directed RNA polymerase II subunit RPB4 [183] 0.69[184] 0.70[185] -0.05[186] 0.16[187] 0.23[188] 0.43[189]
28 GTF2H1 General transcription factor IIH subunit 1 [190] 0.67[191] 0.72[192] 0.62[193] 1.15[194] 0.56[195] 1.03[196]
29 POLR2A DNA-directed RNA polymerase II subunit RPB1 [197] 3.17[198] 1.59[199] 2.54[200] 2.72[201] 2.96[202] 2.66[203]
30 GTF2H4 General transcription factor IIH subunit 4 [204] 0.19[205] 0.54[206] 0.59[207] 0.88[208] -0.05[209] -0.80[210]
31 TBP TATA-box-binding protein [211] 0.21[212] 0.39[213] -0.84[214] -0.52[215] 0.12[216] -0.21[217]
32 TAF6 Transcription initiation factor TFIID subunit 6 [218] 1.39[219] 0.83[220] 1.30[221] 1.37[222] 1.60[223] 0.71[224]
33 MNAT1 CDK-activating kinase assembly factor MAT1 [225] -0.18[226] 1.01[227] 0.14[228] 0.94[229] 0.34[230] -0.08[231]
34 GTF2H3 General transcription factor IIH subunit 3 [232] 1.64[233] 1.95[234] 1.86[235] 1.92[236] 1.54[237] 0.99[238]
35 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit [239] 1.56[240] 1.49[241] 1.88[242] 1.88[243] 1.64[244] 0.04[245]
36 GTF2E1 General transcription factor IIE subunit 1 [246] 0.39[247] 0.41[248] 0.45[249] 0.92[250] -0.06[251] 0.21[252]
37 GTF2A1 Transcription initiation factor IIA subunit 1 [253] 0.93[254] 1.73[255] 2.04[256] 2.77[257] 2.02[258] 2.12[259]
38 TAF9B Transcription initiation factor TFIID subunit 9B [260] 0.40[261] 1.26[262] 1.22[263] 1.78[264] 1.65[265] 1.54[266]
39 TAF4 Transcription initiation factor TFIID subunit 4 [267] 1.85[268] 1.33[269] 1.06[270] 1.32[271] 0.21[272] 0.49[273]
40 TAF2 Transcription initiation factor TFIID subunit 2 [274] 1.03[275] 1.60[276] 2.03[277] 2.53[278] 2.24[279] 2.78[280]
41 GTF2H5 General transcription factor IIH subunit 5 [281] 2.03[282] 2.32[283] 2.10[284] 1.83[285] 1.85[286] 1.90[287]
42 TAF3 Transcription initiation factor TFIID subunit 3 [288] 0.56[289] 0.18[290] 0.52[291] 1.23[292] 0.95[293] 1.25[294]
43 TAF1 Transcription initiation factor TFIID subunit 1 [295] 2.39[296] 2.79[297] 2.10[298] 3.68[299] 2.81[300] 4.01[301]
44 TAF5 Transcription initiation factor TFIID subunit 5 [302] 0.67[303] 1.57[304] 2.93[305] 0.45[306] 1.61[307] 1.27[308]
45 TAF4B Transcription initiation factor TFIID subunit 4B [309] 2.46[310] 2.73[311] [312] 3.56[313] 3.78[314] 1.77[315]
46 TAF7L Transcription initiation factor TFIID subunit 7-like [316] -5.49[317] -4.26[318] -1.63[319] -1.59[320] -1.23[321] 2.61[322]
47 TAF1L Transcription initiation factor TFIID subunit 1-like [323] -1.29[324] -0.58[325] -2.30[326] -0.21[327] -1.58[328] -0.33[329]
[1]
ref_hepatocyte POLR2L
Mean 67.8
Standard deviation 41
Values 12 45 1.2e+02 88 75
[2]
HepG2 POLR2L
Mean 26.9
Standard deviation 9.4
Values 20 34
[3]
HepG2.C3A POLR2L
Mean 23.8
Standard deviation 11
Values 16 31
[4]
HuH.7 POLR2L
Mean 19.4
Standard deviation 11
Values 20 8.1 30
[5]
SNU475 POLR2L
Mean 27.1
Standard deviation 4.2
Values 30 24
[6]
THLE POLR2L
Mean 29.2
Standard deviation 3.5
Values 27 32
[7]
liver POLR2L
Mean 38.1
Standard deviation 40
Values 74 3.8 71 3.9
[8]
ref_hepatocyte TAF9
Mean 40.4
Standard deviation 7.1
Values 33 52 38 41 37
[9]
HepG2 TAF9
Mean 41.2
Standard deviation 8.9
Values 35 48
[10]
HepG2.C3A TAF9
Mean 62.5
Standard deviation 11
Values 55 71
[11]
HuH.7 TAF9
Mean 43.2
Standard deviation 5.2
Values 40 40 49
[12]
SNU475 TAF9
Mean 31.3
Standard deviation 6.6
Values 36 27
[13]
THLE TAF9
Mean 41.7
Standard deviation 2.9
Values 44 40
[14]
liver TAF9
Mean 25.7
Standard deviation 20
Values 46 9.7 40 7.9
[15]
ref_hepatocyte POLR2J
Mean 37.5
Standard deviation 21
Values 11 18 56 56 47
[16]
HepG2 POLR2J
Mean 9.2
Standard deviation 0.083
Values 9.3 9.1
[17]
HepG2.C3A POLR2J
Mean 10
Standard deviation 2.4
Values 8.3 12
[18]
HuH.7 POLR2J
Mean 11.7
Standard deviation 3.3
Values 12 8.1 15
[19]
SNU475 POLR2J
Mean 6.41
Standard deviation 0.42
Values 6.7 6.1
[20]
THLE POLR2J
Mean 9.03
Standard deviation 0.31
Values 9.2 8.8
[21]
liver POLR2J
Mean 6.28
Standard deviation 6.7
Values 14 0.84 9.4 0.7
[22]
ref_hepatocyte TAF10
Mean 32.3
Standard deviation 18
Values 9.7 16 47 51 38
[23]
HepG2 TAF10
Mean 21
Standard deviation 2.3
Values 23 19
[24]
HepG2.C3A TAF10
Mean 15.7
Standard deviation 0.48
Values 15 16
[25]
HuH.7 TAF10
Mean 22.1
Standard deviation 5.9
Values 22 16 28
[26]
SNU475 TAF10
Mean 17.4
Standard deviation 3
Values 19 15
[27]
THLE TAF10
Mean 12.5
Standard deviation 2.9
Values 10 15
[28]
liver TAF10
Mean 7.44
Standard deviation 6.6
Values 11 2.1 15 1.7
[29]
ref_hepatocyte POLR2E
Mean 27.9
Standard deviation 6.6
Values 19 23 30 33 35
[30]
HepG2 POLR2E
Mean 93.8
Standard deviation 2.1
Values 95 92
[31]
HepG2.C3A POLR2E
Mean 81.1
Standard deviation 3.3
Values 83 79
[32]
HuH.7 POLR2E
Mean 82.6
Standard deviation 22
Values 97 58 93
[33]
SNU475 POLR2E
Mean 34.6
Standard deviation 3.7
Values 37 32
[34]
THLE POLR2E
Mean 70.5
Standard deviation 6.2
Values 66 75
[35]
liver POLR2E
Mean 55.3
Standard deviation 38
Values 84 18 92 27
[36]
ref_hepatocyte POLR2H
Mean 27.5
Standard deviation 6.8
Values 24 25 29 38 21
[37]
HepG2 POLR2H
Mean 20.4
Standard deviation 2.4
Values 19 22
[38]
HepG2.C3A POLR2H
Mean 28
Standard deviation 0.23
Values 28 28
[39]
HuH.7 POLR2H
Mean 26.4
Standard deviation 6.6
Values 24 21 34
[40]
SNU475 POLR2H
Mean 7.91
Standard deviation 0.017
Values 7.9 7.9
[41]
THLE POLR2H
Mean 14.3
Standard deviation 0.26
Values 14 14
[42]
liver POLR2H
Mean 10.1
Standard deviation 4.7
Values 14 6.5 14 5.4
[43]
ref_hepatocyte TAF7
Mean 26.2
Standard deviation 4
Values 22 28 32 23 26
[44]
HepG2 TAF7
Mean 53.1
Standard deviation 4.6
Values 50 56
[45]
HepG2.C3A TAF7
Mean 56.4
Standard deviation 6.4
Values 52 61
[46]
HuH.7 TAF7
Mean 45.6
Standard deviation 8.9
Values 42 39 56
[47]
SNU475 TAF7
Mean 44.2
Standard deviation 0.42
Values 45 44
[48]
THLE TAF7
Mean 51.3
Standard deviation 4.1
Values 54 48
[49]
liver TAF7
Mean 21.6
Standard deviation 11
Values 32 14 30 11
[50]
ref_hepatocyte TAF13
Mean 25.8
Standard deviation 26
Values 24 70 19 10 5.6
[51]
HepG2 TAF13
Mean 5.94
Standard deviation 0.49
Values 5.6 6.3
[52]
HepG2.C3A TAF13
Mean 4.86
Standard deviation 1.7
Values 3.7 6.1
[53]
HuH.7 TAF13
Mean 2.46
Standard deviation 0.17
Values 2.6 2.3 2.5
[54]
SNU475 TAF13
Mean 7.1
Standard deviation 0.47
Values 7.4 6.8
[55]
THLE TAF13
Mean 7.44
Standard deviation 0.9
Values 6.8 8.1
[56]
liver TAF13
Mean 1.96
Standard deviation 1.5
Values 0.94 4.1 0.8 2
[57]
ref_hepatocyte POLR2F
Mean 24.8
Standard deviation 6.1
Values 23 34 19 28 21
[58]
HepG2 POLR2F
Mean 22.8
Standard deviation 0.98
Values 22 23
[59]
HepG2.C3A POLR2F
Mean 23.9
Standard deviation 6.4
Values 19 28
[60]
HuH.7 POLR2F
Mean 13
Standard deviation 3.5
Values 13 9.7 17
[61]
SNU475 POLR2F
Mean 7.49
Standard deviation 0.4
Values 7.2 7.8
[62]
THLE POLR2F
Mean 14
Standard deviation 3
Values 12 16
[63]
liver POLR2F
Mean 16.8
Standard deviation 16
Values 36 4.2 24 2.4
[64]
ref_hepatocyte POLR2K
Mean 24.4
Standard deviation 5.5
Values 20 27 17 29 29
[65]
HepG2 POLR2K
Mean 17.9
Standard deviation 2.7
Values 16 20
[66]
HepG2.C3A POLR2K
Mean 28.8
Standard deviation 10
Values 22 36
[67]
HuH.7 POLR2K
Mean 25.7
Standard deviation 7.6
Values 25 19 34
[68]
SNU475 POLR2K
Mean 23.1
Standard deviation 3.2
Values 25 21
[69]
THLE POLR2K
Mean 24.3
Standard deviation 2.2
Values 23 26
[70]
liver POLR2K
Mean 14.3
Standard deviation 12
Values 26 5.3 23 3.1
[71]
ref_hepatocyte POLR2G
Mean 24.2
Standard deviation 8.6
Values 18 28 13 34 28
[72]
HepG2 POLR2G
Mean 23.8
Standard deviation 0.4
Values 24 24
[73]
HepG2.C3A POLR2G
Mean 25.8
Standard deviation 7.7
Values 20 31
[74]
HuH.7 POLR2G
Mean 17.4
Standard deviation 8.7
Values 15 10 27
[75]
SNU475 POLR2G
Mean 19.9
Standard deviation 4.4
Values 23 17
[76]
THLE POLR2G
Mean 20.5
Standard deviation 2.2
Values 19 22
[77]
liver POLR2G
Mean 9.68
Standard deviation 8.6
Values 14 2.8 20 2.3
[78]
ref_hepatocyte TAF15
Mean 22.8
Standard deviation 9.3
Values 14 27 13 35 25
[79]
HepG2 TAF15
Mean 55.5
Standard deviation 1.4
Values 56 54
[80]
HepG2.C3A TAF15
Mean 32.3
Standard deviation 4.4
Values 29 35
[81]
HuH.7 TAF15
Mean 56.9
Standard deviation 23
Values 71 31 68
[82]
SNU475 TAF15
Mean 46.8
Standard deviation 6.5
Values 51 42
[83]
THLE TAF15
Mean 70
Standard deviation 4.4
Values 67 73
[84]
liver TAF15
Mean 7.4
Standard deviation 3.8
Values 4.4 12 4 9.6
[85]
ref_hepatocyte GTF2F2
Mean 22.4
Standard deviation 20
Values 31 55 12 8.4 5.6
[86]
HepG2 GTF2F2
Mean 12.8
Standard deviation 1.9
Values 11 14
[87]
HepG2.C3A GTF2F2
Mean 17.7
Standard deviation 0.02
Values 18 18
[88]
HuH.7 GTF2F2
Mean 21.2
Standard deviation 3.4
Values 23 17 23
[89]
SNU475 GTF2F2
Mean 9.42
Standard deviation 1.8
Values 8.2 11
[90]
THLE GTF2F2
Mean 12.4
Standard deviation 1.8
Values 11 14
[91]
liver GTF2F2
Mean 5.3
Standard deviation 2.8
Values 8.4 3.5 6.8 2.5
[92]
ref_hepatocyte POLR2C
Mean 17.6
Standard deviation 4.3
Values 15 13 24 20 17
[93]
HepG2 POLR2C
Mean 68.6
Standard deviation 8
Values 63 74
[94]
HepG2.C3A POLR2C
Mean 66
Standard deviation 11
Values 58 74
[95]
HuH.7 POLR2C
Mean 44.6
Standard deviation 6.4
Values 45 38 51
[96]
SNU475 POLR2C
Mean 27.4
Standard deviation 1.2
Values 28 27
[97]
THLE POLR2C
Mean 36.1
Standard deviation 1
Values 37 35
[98]
liver POLR2C
Mean 18.3
Standard deviation 4.9
Values 20 16 24 13
[99]
ref_hepatocyte GTF2E2
Mean 15.9
Standard deviation 8.1
Values 13 16 29 14 7.7
[100]
HepG2 GTF2E2
Mean 25.5
Standard deviation 2.7
Values 27 24
[101]
HepG2.C3A GTF2E2
Mean 19.9
Standard deviation 1.5
Values 19 21
[102]
HuH.7 GTF2E2
Mean 25.3
Standard deviation 3.2
Values 23 24 29
[103]
SNU475 GTF2E2
Mean 15.7
Standard deviation 0.79
Values 16 15
[104]
THLE GTF2E2
Mean 14.5
Standard deviation 0.41
Values 15 14
[105]
liver GTF2E2
Mean 8.57
Standard deviation 2.7
Values 10 6.7 12 5.9
[106]
ref_hepatocyte CCNH
Mean 15.2
Standard deviation 4.9
Values 13 23 13 17 10
[107]
HepG2 CCNH
Mean 10.6
Standard deviation 1.9
Values 9.2 12
[108]
HepG2.C3A CCNH
Mean 17
Standard deviation 5.2
Values 13 21
[109]
HuH.7 CCNH
Mean 10.7
Standard deviation 2.1
Values 10 8.7 13
[110]
SNU475 CCNH
Mean 8.14
Standard deviation 0.45
Values 7.8 8.5
[111]
THLE CCNH
Mean 23.9
Standard deviation 3.5
Values 21 26
[112]
liver CCNH
Mean 11.4
Standard deviation 3.1
Values 13 10 14 7.6
[113]
ref_hepatocyte POLR2I
Mean 14.8
Standard deviation 8.2
Values 6.7 5.5 20 18 24
[114]
HepG2 POLR2I
Mean 10.9
Standard deviation 0.95
Values 12 10
[115]
HepG2.C3A POLR2I
Mean 10.6
Standard deviation 0.63
Values 10 11
[116]
HuH.7 POLR2I
Mean 9.58
Standard deviation 4.2
Values 9.6 5.4 14
[117]
SNU475 POLR2I
Mean 5.6
Standard deviation 1.6
Values 4.4 6.8
[118]
THLE POLR2I
Mean 6.67
Standard deviation 0.3
Values 6.9 6.5
[119]
liver POLR2I
Mean 10.3
Standard deviation 10
Values 20 2.1 19 0.83
[120]
ref_hepatocyte ERCC3
Mean 14.3
Standard deviation 12
Values 32 22 7.9 5.7 4.5
[121]
HepG2 ERCC3
Mean 29.2
Standard deviation 0.049
Values 29 29
[122]
HepG2.C3A ERCC3
Mean 30.9
Standard deviation 3.7
Values 28 34
[123]
HuH.7 ERCC3
Mean 19.7
Standard deviation 4.7
Values 19 15 25
[124]
SNU475 ERCC3
Mean 19.2
Standard deviation 0.056
Values 19 19
[125]
THLE ERCC3
Mean 29.5
Standard deviation 3.2
Values 27 32
[126]
liver ERCC3
Mean 12.5
Standard deviation 0.77
Values 13 12 12 13
[127]
ref_hepatocyte GTF2F1
Mean 14.3
Standard deviation 3.7
Values 14 17 18 14 8.5
[128]
HepG2 GTF2F1
Mean 41.2
Standard deviation 6.7
Values 46 36
[129]
HepG2.C3A GTF2F1
Mean 27.7
Standard deviation 6.3
Values 32 23
[130]
HuH.7 GTF2F1
Mean 73.5
Standard deviation 6.5
Values 81 71 68
[131]
SNU475 GTF2F1
Mean 19.9
Standard deviation 2.9
Values 18 22
[132]
THLE GTF2F1
Mean 31.8
Standard deviation 5
Values 28 35
[133]
liver GTF2F1
Mean 8.41
Standard deviation 2.9
Values 9.6 6.7 12 5.4
[134]
ref_hepatocyte TAF11
Mean 13.7
Standard deviation 8.6
Values 23 24 7 9.6 6
[135]
HepG2 TAF11
Mean 20.2
Standard deviation 1.9
Values 19 22
[136]
HepG2.C3A TAF11
Mean 21.8
Standard deviation 7
Values 17 27
[137]
HuH.7 TAF11
Mean 12.7
Standard deviation 3.6
Values 13 8.9 16
[138]
SNU475 TAF11
Mean 20.9
Standard deviation 3
Values 23 19
[139]
THLE TAF11
Mean 15.7
Standard deviation 0.12
Values 16 16
[140]
liver TAF11
Mean 5.12
Standard deviation 1.7
Values 5.1 4.3 7.5 3.6
[141]
ref_hepatocyte TAF12
Mean 13.4
Standard deviation 3.6
Values 11 12 20 13 11
[142]
HepG2 TAF12
Mean 9.46
Standard deviation 0.13
Values 9.6 9.4
[143]
HepG2.C3A TAF12
Mean 7.64
Standard deviation 1.3
Values 6.7 8.6
[144]
HuH.7 TAF12
Mean 14.9
Standard deviation 2.9
Values 14 13 18
[145]
SNU475 TAF12
Mean 10.3
Standard deviation 0.16
Values 10 10
[146]
THLE TAF12
Mean 9.43
Standard deviation 1.2
Values 8.6 10
[147]
liver TAF12
Mean 5.94
Standard deviation 3.2
Values 9 4 8.3 2.4
[148]
ref_hepatocyte GTF2A2
Mean 13.3
Standard deviation 5.5
Values 14 20 4.9 14 13
[149]
HepG2 GTF2A2
Mean 21.6
Standard deviation 3.7
Values 19 24
[150]
HepG2.C3A GTF2A2
Mean 18.6
Standard deviation 9
Values 12 25
[151]
HuH.7 GTF2A2
Mean 14
Standard deviation 4.4
Values 14 9.7 19
[152]
SNU475 GTF2A2
Mean 25.1
Standard deviation 1.8
Values 26 24
[153]
THLE GTF2A2
Mean 34.4
Standard deviation 2.7
Values 33 36
[154]
liver GTF2A2
Mean 10.5
Standard deviation 11
Values 22 1.6 17 1.3
[155]
ref_hepatocyte CDK7
Mean 12
Standard deviation 6.1
Values 16 14 19 5.4 5.6
[156]
HepG2 CDK7
Mean 16.9
Standard deviation 3.8
Values 14 20
[157]
HepG2.C3A CDK7
Mean 30.4
Standard deviation 2.1
Values 29 32
[158]
HuH.7 CDK7
Mean 24
Standard deviation 1.4
Values 23 24 25
[159]
SNU475 CDK7
Mean 14.9
Standard deviation 0.18
Values 15 15
[160]
THLE CDK7
Mean 13.3
Standard deviation 2.2
Values 12 15
[161]
liver CDK7
Mean 3.33
Standard deviation 1.6
Values 4.4 2.2 5 1.7
[162]
ref_hepatocyte GTF2B
Mean 11.9
Standard deviation 8.2
Values 3.7 6.2 25 13 11
[163]
HepG2 GTF2B
Mean 12.3
Standard deviation 2.2
Values 11 14
[164]
HepG2.C3A GTF2B
Mean 15.2
Standard deviation 2.2
Values 14 17
[165]
HuH.7 GTF2B
Mean 14.4
Standard deviation 2.4
Values 12 16 15
[166]
SNU475 GTF2B
Mean 10.7
Standard deviation 0.36
Values 10 11
[167]
THLE GTF2B
Mean 12.5
Standard deviation 1.2
Values 12 13
[168]
liver GTF2B
Mean 9.29
Standard deviation 3.3
Values 12 6.7 12 6.2
[169]
ref_hepatocyte POLR2B
Mean 11.1
Standard deviation 5.1
Values 14 19 8.6 7.8 6.5
[170]
HepG2 POLR2B
Mean 56.9
Standard deviation 17
Values 45 69
[171]
HepG2.C3A POLR2B
Mean 66.2
Standard deviation 18
Values 54 79
[172]
HuH.7 POLR2B
Mean 60.6
Standard deviation 7.6
Values 65 52 65
[173]
SNU475 POLR2B
Mean 43.8
Standard deviation 2.4
Values 42 46
[174]
THLE POLR2B
Mean 79.8
Standard deviation 7.8
Values 74 85
[175]
liver POLR2B
Mean 30.4
Standard deviation 5.1
Values 27 37 26 33
[176]
ref_hepatocyte GTF2H2
Mean 10.7
Standard deviation 11
Values 9.1 31 3.3 2.8 7.7
[177]
HepG2 GTF2H2
Mean 0.557
Standard deviation 0.023
Values 0.57 0.54
[178]
HepG2.C3A GTF2H2
Mean 0.956
Standard deviation 0.074
Values 0.9 1
[179]
HuH.7 GTF2H2
Mean 0.792
Standard deviation 0.083
Values 0.86 0.7 0.82
[180]
SNU475 GTF2H2
Mean 0.539
Standard deviation 0.12
Values 0.63 0.45
[181]
THLE GTF2H2
Mean 0.254
Standard deviation 0.017
Values 0.24 0.27
[182]
liver GTF2H2
Mean 0.594
Standard deviation 0.13
Values 0.54 0.66 0.44 0.74
[183]
ref_hepatocyte POLR2D
Mean 10.5
Standard deviation 5.2
Values 17 13 12 6.5 4.1
[184]
HepG2 POLR2D
Mean 27.7
Standard deviation 1.1
Values 27 29
[185]
HepG2.C3A POLR2D
Mean 27
Standard deviation 7.8
Values 22 33
[186]
HuH.7 POLR2D
Mean 15.9
Standard deviation 5.1
Values 19 10 19
[187]
SNU475 POLR2D
Mean 14.6
Standard deviation 0.75
Values 14 15
[188]
THLE POLR2D
Mean 19.2
Standard deviation 4.2
Values 16 22
[189]
liver POLR2D
Mean 11
Standard deviation 2.8
Values 13 8.6 14 8.7
[190]
ref_hepatocyte GTF2H1
Mean 8.08
Standard deviation 4.5
Values 8.5 16 5.2 6.3 4.6
[191]
HepG2 GTF2H1
Mean 20.9
Standard deviation 4.8
Values 18 24
[192]
HepG2.C3A GTF2H1
Mean 21
Standard deviation 5.4
Values 17 25
[193]
HuH.7 GTF2H1
Mean 19.4
Standard deviation 2.3
Values 17 19 22
[194]
SNU475 GTF2H1
Mean 22.4
Standard deviation 0.028
Values 22 22
[195]
THLE GTF2H1
Mean 18.5
Standard deviation 2.7
Values 17 20
[196]
liver GTF2H1
Mean 12.9
Standard deviation 1.7
Values 12 15 12 12
[197]
ref_hepatocyte POLR2A
Mean 7.79
Standard deviation 4.5
Values 9.5 5.3 15 4.9 4.5
[198]
HepG2 POLR2A
Mean 114
Standard deviation 23
Values 98 1.3e+02
[199]
HepG2.C3A POLR2A
Mean 37
Standard deviation 6.8
Values 32 42
[200]
HuH.7 POLR2A
Mean 70.7
Standard deviation 33
Values 1.1e+02 40 66
[201]
SNU475 POLR2A
Mean 63.7
Standard deviation 8.3
Values 70 58
[202]
THLE POLR2A
Mean 93.7
Standard deviation 26
Values 75 1.1e+02
[203]
liver POLR2A
Mean 38.4
Standard deviation 3.6
Values 41 33 40 40
[204]
ref_hepatocyte GTF2H4
Mean 7.21
Standard deviation 1.9
Values 5.6 4.9 9.1 8.2 8.4
[205]
HepG2 GTF2H4
Mean 13.4
Standard deviation 0.51
Values 14 13
[206]
HepG2.C3A GTF2H4
Mean 16.5
Standard deviation 0.89
Values 17 16
[207]
HuH.7 GTF2H4
Mean 16.9
Standard deviation 3.1
Values 16 14 20
[208]
SNU475 GTF2H4
Mean 16.5
Standard deviation 1.8
Values 18 15
[209]
THLE GTF2H4
Mean 10.8
Standard deviation 0.16
Values 11 11
[210]
liver GTF2H4
Mean 3.23
Standard deviation 0.65
Values 3.9 2.6 2.8 3.7
[211]
ref_hepatocyte TBP
Mean 5.93
Standard deviation 3.8
Values 12 4.9 5.8 3.4 3
[212]
HepG2 TBP
Mean 11.2
Standard deviation 0.25
Values 11 11
[213]
HepG2.C3A TBP
Mean 12.2
Standard deviation 1.7
Values 11 13
[214]
HuH.7 TBP
Mean 5.17
Standard deviation 1.2
Values 5.1 4 6.4
[215]
SNU475 TBP
Mean 5.14
Standard deviation 0.33
Values 4.9 5.4
[216]
THLE TBP
Mean 10
Standard deviation 0.12
Values 9.9 10
[217]
liver TBP
Mean 4
Standard deviation 1.5
Values 4.9 3 5.6 2.5
[218]
ref_hepatocyte TAF6
Mean 5.56
Standard deviation 3.5
Values 4.3 2.7 12 5.4 3.9
[219]
HepG2 TAF6
Mean 23.7
Standard deviation 4.1
Values 27 21
[220]
HepG2.C3A TAF6
Mean 15.6
Standard deviation 0.066
Values 16 16
[221]
HuH.7 TAF6
Mean 21.4
Standard deviation 6.1
Values 26 15 23
[222]
SNU475 TAF6
Mean 17.9
Standard deviation 0.91
Values 17 19
[223]
THLE TAF6
Mean 26.1
Standard deviation 0.45
Values 26 26
[224]
liver TAF6
Mean 7.09
Standard deviation 2.8
Values 9.6 5 9.4 4.4
[225]
ref_hepatocyte MNAT1
Mean 5.52
Standard deviation 3.5
Values 9.2 9.1 1.4 4 3.9
[226]
HepG2 MNAT1
Mean 7.94
Standard deviation 1.1
Values 7.1 8.7
[227]
HepG2.C3A MNAT1
Mean 17.5
Standard deviation 3.6
Values 15 20
[228]
HuH.7 MNAT1
Mean 9.48
Standard deviation 1.5
Values 8.9 8.4 11
[229]
SNU475 MNAT1
Mean 13.2
Standard deviation 1.5
Values 14 12
[230]
THLE MNAT1
Mean 10.8
Standard deviation 0.19
Values 11 11
[231]
liver MNAT1
Mean 4.05
Standard deviation 2
Values 6.8 3 4.3 2.2
[232]
ref_hepatocyte GTF2H3
Mean 4.54
Standard deviation 2.1
Values 5.9 4.9 7.1 2.7 2.2
[233]
HepG2 GTF2H3
Mean 23.1
Standard deviation 0.71
Values 23 24
[234]
HepG2.C3A GTF2H3
Mean 27.6
Standard deviation 6.6
Values 23 32
[235]
HuH.7 GTF2H3
Mean 25.7
Standard deviation 6.9
Values 30 18 29
[236]
SNU475 GTF2H3
Mean 21.4
Standard deviation 4.7
Values 25 18
[237]
THLE GTF2H3
Mean 20.6
Standard deviation 3.6
Values 18 23
[238]
liver GTF2H3
Mean 7.05
Standard deviation 2
Values 5.8 9.1 8.4 5
[239]
ref_hepatocyte ERCC2
Mean 4.52
Standard deviation 1.1
Values 4.3 4.5 6.3 3.2 4.3
[240]
HepG2 ERCC2
Mean 21.7
Standard deviation 5
Values 25 18
[241]
HepG2.C3A ERCC2
Mean 20
Standard deviation 5.5
Values 24 16
[242]
HuH.7 ERCC2
Mean 26
Standard deviation 8.3
Values 34 17 27
[243]
SNU475 ERCC2
Mean 20.7
Standard deviation 9.1
Values 27 14
[244]
THLE ERCC2
Mean 21.9
Standard deviation 0.12
Values 22 22
[245]
liver ERCC2
Mean 3.61
Standard deviation 0.8
Values 3 3.3 3.3 4.8
[246]
ref_hepatocyte GTF2E1
Mean 4.23
Standard deviation 2.5
Values 4.6 5.2 7.8 1.8 1.8
[247]
HepG2 GTF2E1
Mean 9.03
Standard deviation 1.5
Values 8 10
[248]
HepG2.C3A GTF2E1
Mean 8.85
Standard deviation 2.3
Values 7.2 10
[249]
HuH.7 GTF2E1
Mean 9.04
Standard deviation 1.2
Values 9.1 7.8 10
[250]
SNU475 GTF2E1
Mean 9.95
Standard deviation 1.9
Values 11 8.6
[251]
THLE GTF2E1
Mean 6.29
Standard deviation 0.64
Values 5.8 6.7
[252]
liver GTF2E1
Mean 3.83
Standard deviation 0.96
Values 3.1 4.8 4.5 2.9
[253]
ref_hepatocyte GTF2A1
Mean 3.64
Standard deviation 2.3
Values 5 4.8 6 1.1 1.4
[254]
HepG2 GTF2A1
Mean 11.3
Standard deviation 0.77
Values 11 12
[255]
HepG2.C3A GTF2A1
Mean 19
Standard deviation 2.6
Values 17 21
[256]
HuH.7 GTF2A1
Mean 23.3
Standard deviation 1.7
Values 25 23 22
[257]
SNU475 GTF2A1
Mean 30.9
Standard deviation 0.95
Values 30 32
[258]
THLE GTF2A1
Mean 22.9
Standard deviation 1.6
Values 22 24
[259]
liver GTF2A1
Mean 12.3
Standard deviation 5.6
Values 8.6 19 6.7 15
[260]
ref_hepatocyte TAF9B
Mean 3.56
Standard deviation 1.1
Values 5.2 3.6 2.4 2.6 4
[261]
HepG2 TAF9B
Mean 7.65
Standard deviation 2.6
Values 5.8 9.5
[262]
HepG2.C3A TAF9B
Mean 13.5
Standard deviation 5
Values 9.9 17
[263]
HuH.7 TAF9B
Mean 13
Standard deviation 1.4
Values 14 11 14
[264]
SNU475 TAF9B
Mean 15.2
Standard deviation 3.1
Values 17 13
[265]
THLE TAF9B
Mean 17.3
Standard deviation 0.64
Values 18 17
[266]
liver TAF9B
Mean 8.07
Standard deviation 3.4
Values 6.3 8.2 13 4.9
[267]
ref_hepatocyte TAF4
Mean 2.87
Standard deviation 1.6
Values 5.7 2.4 2.7 1.5 2
[268]
HepG2 TAF4
Mean 16.9
Standard deviation 2.5
Values 15 19
[269]
HepG2.C3A TAF4
Mean 11.4
Standard deviation 0.45
Values 12 11
[270]
HuH.7 TAF4
Mean 9.32
Standard deviation 2
Values 11 7 10
[271]
SNU475 TAF4
Mean 8.94
Standard deviation 0.021
Values 9 8.9
[272]
THLE TAF4
Mean 5.16
Standard deviation 1.2
Values 4.3 6
[273]
liver TAF4
Mean 3.15
Standard deviation 0.87
Values 3.2 3.8 1.9 3.7
[274]
ref_hepatocyte TAF2
Mean 2.85
Standard deviation 1.4
Values 4.1 4.6 2.4 1.3 1.9
[275]
HepG2 TAF2
Mean 9.5
Standard deviation 4.8
Values 6.1 13
[276]
HepG2.C3A TAF2
Mean 13.6
Standard deviation 3.9
Values 11 16
[277]
HuH.7 TAF2
Mean 18.2
Standard deviation 2.3
Values 21 16 17
[278]
SNU475 TAF2
Mean 20.5
Standard deviation 1.5
Values 22 19
[279]
THLE TAF2
Mean 20.8
Standard deviation 0.094
Values 21 21
[280]
liver TAF2
Mean 15.2
Standard deviation 1.3
Values 15 17 14 14
[281]
ref_hepatocyte GTF2H5
Mean 2.7
Standard deviation 1.8
Values 2.9 1.9 0.76 2.3 5.6
[282]
HepG2 GTF2H5
Mean 18
Standard deviation 4.3
Values 15 21
[283]
HepG2.C3A GTF2H5
Mean 21.3
Standard deviation 10
Values 14 28
[284]
HuH.7 GTF2H5
Mean 18
Standard deviation 4
Values 17 15 22
[285]
SNU475 GTF2H5
Mean 12
Standard deviation 4.1
Values 15 9.1
[286]
THLE GTF2H5
Mean 15.1
Standard deviation 3.1
Values 13 17
[287]
liver GTF2H5
Mean 7.84
Standard deviation 6.2
Values 12 2.9 15 2.3
[288]
ref_hepatocyte TAF3
Mean 2.15
Standard deviation 1.6
Values 4.5 2.6 2.2 0.85 0.52
[289]
HepG2 TAF3
Mean 5.18
Standard deviation 0.24
Values 5 5.4
[290]
HepG2.C3A TAF3
Mean 3.85
Standard deviation 0.67
Values 3.4 4.3
[291]
HuH.7 TAF3
Mean 4.83
Standard deviation 0.85
Values 5.5 5.1 3.9
[292]
SNU475 TAF3
Mean 6.3
Standard deviation 1.2
Values 5.5 7.1
[293]
THLE TAF3
Mean 6.46
Standard deviation 0.16
Values 6.6 6.3
[294]
liver TAF3
Mean 3.99
Standard deviation 2.8
Values 7.5 1.9 4.9 1.7
[295]
ref_hepatocyte TAF1
Mean 1.3
Standard deviation 0.68
Values 2.4 1.4 0.93 0.67 1.1
[296]
HepG2 TAF1
Mean 11.1
Standard deviation 2.2
Values 9.5 13
[297]
HepG2.C3A TAF1
Mean 14.1
Standard deviation 0.25
Values 14 14
[298]
HuH.7 TAF1
Mean 8.66
Standard deviation 1
Values 9 9.5 7.5
[299]
SNU475 TAF1
Mean 20.6
Standard deviation 0.96
Values 21 20
[300]
THLE TAF1
Mean 14.1
Standard deviation 2
Values 13 16
[301]
liver TAF1
Mean 16.3
Standard deviation 12
Values 6.7 29 6 23
[302]
ref_hepatocyte TAF5
Mean 1.03
Standard deviation 0.25
Values 1.5 0.93 1 0.86 0.88
[303]
HepG2 TAF5
Mean 2.67
Standard deviation 0.3
Values 2.5 2.9
[304]
HepG2.C3A TAF5
Mean 4.84
Standard deviation 0.4
Values 4.6 5.1
[305]
HuH.7 TAF5
Mean 12.3
Standard deviation 4.4
Values 15 7.2 14
[306]
SNU475 TAF5
Mean 1.76
Standard deviation 0.59
Values 1.3 2.2
[307]
THLE TAF5
Mean 4.87
Standard deviation 0.078
Values 4.8 4.9
[308]
liver TAF5
Mean 1.94
Standard deviation 0.39
Values 1.4 2 2 2.4
[309]
ref_hepatocyte TAF4B
Mean 0.158
Standard deviation 0.15
Values 0.37 0.22 0.043 0 0.15
[310]
HepG2 TAF4B
Mean 1.41
Standard deviation 0.083
Values 1.5 1.4
[311]
HepG2.C3A TAF4B
Mean 1.65
Standard deviation 0.023
Values 1.7 1.6
[312]
HuH.7 TAF4B
Mean 0
Standard deviation 0
Values 0 0 0
[313]
SNU475 TAF4B
Mean 2.31
Standard deviation 0.39
Values 2 2.6
[314]
THLE TAF4B
Mean 3.35
Standard deviation 0.34
Values 3.6 3.1
[315]
liver TAF4B
Mean 0.418
Standard deviation 0.26
Values 0.45 0.67 0.051 0.5
[316]
ref_hepatocyte TAF7L
Mean 0.0591
Standard deviation 0.1
Values 0.054 0 0 0.24 0
[317]
HepG2 TAF7L
Mean 0.00214
Standard deviation 0.003
Values 0 0.0043
[318]
HepG2.C3A TAF7L
Mean 0.00486
Standard deviation 0.0069
Values 0.0097 0
[319]
HuH.7 TAF7L
Mean 0.0298
Standard deviation 0.029
Values 0.057 0.032 0
[320]
SNU475 TAF7L
Mean 0.0245
Standard deviation 0.0084
Values 0.019 0.03
[321]
THLE TAF7L
Mean 0.039
Standard deviation 0.005
Values 0.035 0.043
[322]
liver TAF7L
Mean 0.28
Standard deviation 0.17
Values 0.42 0.14 0.44 0.12
[323]
ref_hepatocyte TAF1L
Mean 0.0536
Standard deviation 0.07
Values 0.17 0.034 0 0 0.065
[324]
HepG2 TAF1L
Mean 0.0358
Standard deviation 0.01
Values 0.029 0.043
[325]
HepG2.C3A TAF1L
Mean 0.0565
Standard deviation 0.011
Values 0.049 0.064
[326]
HuH.7 TAF1L
Mean 0.017
Standard deviation 0.011
Values 0.016 0.0064 0.028
[327]
SNU475 TAF1L
Mean 0.0576
Standard deviation 0.062
Values 0.014 0.1
[328]
THLE TAF1L
Mean 0.0278
Standard deviation 0.0058
Values 0.024 0.032
[329]
liver TAF1L
Mean 0.0332
Standard deviation 0.025
Values 0 0.029 0.051 0.053