REACTOME_HDR_THROUGH_SINGLE_STRAND_ANNEALING_SSA | Return to index | ||||||||
Order | Gene | Description | ref_hepatocyte | HepG2 | HepG2.C3A | HuH.7 | SNU475 | THLE | liver |
1 | RPA2 | Replication protein A 32 kDa subunit | [1] | -1.84[2] | -2.33[3] | -2.02[4] | -1.65[5] | -1.76[6] | -2.78[7] |
2 | ERCC1 | DNA excision repair protein ERCC-1 | [8] | -0.87[9] | -1.58[10] | -1.67[11] | -1.56[12] | -1.33[13] | -1.45[14] |
3 | RFC4 | Replication factor C subunit 4 | [15] | -1.35[16] | -1.29[17] | -0.96[18] | -1.87[19] | -0.73[20] | -3.14[21] |
4 | RFC2 | Replication factor C subunit 2 | [22] | -0.65[23] | -1.36[24] | -1.56[25] | -0.72[26] | -0.46[27] | -1.16[28] |
5 | RPA1 | Replication protein A 70 kDa DNA-binding subunit | [29] | 0.93[30] | 0.10[31] | 0.13[32] | 0.95[33] | 0.77[34] | -0.38[35] |
6 | RPA3 | Replication protein A 14 kDa subunit | [36] | -0.75[37] | -0.51[38] | -0.04[39] | -1.81[40] | -1.72[41] | -1.08[42] |
7 | RAD17 | Cell cycle checkpoint protein RAD17 | [43] | -1.23[44] | -0.71[45] | -0.91[46] | -1.25[47] | -1.09[48] | -0.82[49] |
8 | KAT5 | Histone acetyltransferase KAT5 | [50] | -1.16[51] | -1.32[52] | -2.59[53] | -1.74[54] | -2.02[55] | -1.45[56] |
9 | NBN | Nibrin | [57] | -0.80[58] | -0.19[59] | -0.68[60] | 0.60[61] | -0.47[62] | 0.89[63] |
10 | RFC5 | Replication factor C subunit 5 | [64] | -0.25[65] | -0.36[66] | -0.41[67] | -0.64[68] | -0.30[69] | -1.26[70] |
11 | RAD51 | DNA repair protein RAD51 homolog 1 | [71] | -0.64[72] | -1.38[73] | -1.53[74] | -1.09[75] | -1.31[76] | -4.33[77] |
12 | ABL1 | Tyrosine-protein kinase ABL1 | [78] | 1.85[79] | 0.67[80] | 1.22[81] | 1.17[82] | 1.66[83] | 0.56[84] |
13 | RAD50 | DNA repair protein RAD50 | [85] | -0.23[86] | 1.33[87] | 0.24[88] | 0.36[89] | 0.66[90] | 1.82[91] |
14 | RMI2 | RecQ-mediated genome instability protein 2 | [92] | 0.87[93] | -0.42[94] | -0.70[95] | -2.10[96] | -1.99[97] | -4.82[98] |
15 | RBBP8 | DNA endonuclease RBBP8 | [99] | -0.19[100] | 0.66[101] | -0.96[102] | 0.53[103] | 0.54[104] | -0.14[105] |
16 | TOPBP1 | DNA topoisomerase 2-binding protein 1 | [106] | 0.64[107] | 1.11[108] | 1.02[109] | 1.23[110] | 1.44[111] | 0.50[112] |
17 | RFC3 | Replication factor C subunit 3 | [113] | 0.79[114] | 1.09[115] | 0.99[116] | 0.35[117] | 0.75[118] | -1.25[119] |
18 | HUS1 | Checkpoint protein HUS1 | [120] | -1.10[121] | -1.39[122] | -1.10[123] | -1.01[124] | -1.40[125] | 0.99[126] |
19 | TOP3A | DNA topoisomerase 3-alpha | [127] | 1.58[128] | 0.69[129] | 0.74[130] | 0.94[131] | 1.14[132] | 1.41[133] |
20 | RAD1 | Cell cycle checkpoint protein RAD1 | [134] | 0.98[135] | 1.10[136] | 1.39[137] | 0.90[138] | 1.60[139] | 0.52[140] |
21 | RAD9A | Cell cycle checkpoint control protein RAD9A | [141] | -0.31[142] | -0.60[143] | 0.97[144] | 1.43[145] | -0.94[146] | -0.56[147] |
22 | BRCA1 | Breast cancer type 1 susceptibility protein | [148] | 1.29[149] | 1.97[150] | 2.11[151] | 1.24[152] | 1.57[153] | 1.29[154] |
23 | ATRIP | ATR-interacting protein | [155] | -0.14[156] | -0.46[157] | 0.17[158] | -1.25[159] | -0.36[160] | -0.55[161] |
24 | ATR | Serine/threonine-protein kinase ATR | [162] | 0.71[163] | 1.14[164] | 0.98[165] | 1.63[166] | 1.40[167] | 3.16[168] |
25 | WRN | Werner syndrome ATP-dependent helicase | [169] | 0.22[170] | 1.12[171] | 2.81[172] | 0.80[173] | 0.42[174] | 1.58[175] |
26 | RAD52 | DNA repair protein RAD52 homolog | [176] | -0.01[177] | 0.20[178] | 0.06[179] | -1.32[180] | -1.06[181] | 0.37[182] |
27 | RMI1 | RecQ-mediated genome instability protein 1 | [183] | 0.20[184] | 0.87[185] | 1.07[186] | 1.17[187] | 1.83[188] | 0.60[189] |
28 | ATM | Serine-protein kinase ATM | [190] | 2.65[191] | 3.69[192] | 3.16[193] | 3.25[194] | 2.54[195] | 4.60[196] |
29 | ERCC4 | DNA repair endonuclease XPF | [197] | 1.83[198] | 0.95[199] | 0.87[200] | 1.32[201] | 1.28[202] | 2.03[203] |
30 | DNA2 | DNA replication ATP-dependent helicase/nuclease DNA2 | [204] | 1.38[205] | 2.58[206] | 1.54[207] | 1.74[208] | 1.21[209] | 1.18[210] |
31 | EXO1 | Exonuclease 1 | [211] | 1.52[212] | 1.24[213] | 2.17[214] | 2.87[215] | 1.96[216] | -1.86[217] |
32 | BRIP1 | Fanconi anemia group J protein | [218] | 1.76[219] | 2.60[220] | 2.36[221] | 2.30[222] | 2.15[223] | 1.57[224] |
33 | BLM | Bloom syndrome protein | [225] | 1.16[226] | 1.95[227] | 2.51[228] | 1.99[229] | 1.88[230] | -0.77[231] |
34 | BARD1 | BRCA1-associated RING domain protein 1 | [232] | 0.93[233] | 1.35[234] | 1.13[235] | 1.79[236] | 1.68[237] | 1.49[238] |
35 | RAD9B | Cell cycle checkpoint control protein RAD9B | [239] | -3.72[240] | -1.08[241] | -2.02[242] | -0.47[243] | -1.33[244] | -1.17[245] |
36 | RHNO1 | RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 | [246] | [247] | [248] | [249] | [250] | [251] | [252] |
37 | MRE11 | Double-strand break repair protein MRE11 | [253] | [254] | [255] | [256] | [257] | [258] | [259] |