REACTOME_GENE_SILENCING_BY_RNA |
Return to index |
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Order |
Gene |
Description |
ref_hepatocyte |
HepG2 |
HepG2.C3A |
HuH.7 |
SNU475 |
THLE |
liver |
1 |
ANG |
Angiogenin |
[1] |
-5.06[2] |
-4.31[3] |
-5.31[4] |
-9.47[5] |
-9.69[6] |
-0.16[7] |
2 |
HSP90AA1 |
Heat shock protein HSP 90-alpha |
[8] |
-0.26[9] |
0.35[10] |
-0.27[11] |
0.38[12] |
0.12[13] |
-0.99[14] |
3 |
RAN |
GTP-binding nuclear protein Ran |
[15] |
0.02[16] |
-0.22[17] |
-0.72[18] |
-0.86[19] |
-0.58[20] |
-1.67[21] |
4 |
POLR2L |
DNA-directed RNA polymerases I, II, and III subunit RPABC5 |
[22] |
-2.09[23] |
-2.46[24] |
-2.54[25] |
-1.90[26] |
-1.92[27] |
-1.07[28] |
5 |
SEC13 |
Protein SEC13 homolog |
[29] |
-0.57[30] |
-0.56[31] |
-0.22[32] |
-1.43[33] |
-1.23[34] |
-1.29[35] |
6 |
POLR2J |
DNA-directed RNA polymerase II subunit RPB11-a |
[36] |
-2.79[37] |
-2.86[38] |
-2.42[39] |
-3.13[40] |
-2.76[41] |
-2.82[42] |
7 |
POLR2E |
DNA-directed RNA polymerases I, II, and III subunit RPABC1 |
[43] |
0.99[44] |
0.59[45] |
0.82[46] |
-0.27[47] |
0.64[48] |
0.75[49] |
8 |
POLR2H |
DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
[50] |
-1.19[51] |
-0.93[52] |
-0.80[53] |
-2.38[54] |
-1.64[55] |
-1.69[56] |
9 |
POLR2F |
DNA-directed RNA polymerases I, II, and III subunit RPABC2 |
[57] |
-0.88[58] |
-1.01[59] |
-1.67[60] |
-2.31[61] |
-1.52[62] |
-0.80[63] |
10 |
POLR2K |
DNA-directed RNA polymerases I, II, and III subunit RPABC4 |
[64] |
-1.21[65] |
-0.71[66] |
-0.67[67] |
-0.66[68] |
-0.71[69] |
-1.01[70] |
11 |
POLR2G |
DNA-directed RNA polymerase II subunit RPB7 |
[71] |
-0.78[72] |
-0.86[73] |
-1.21[74] |
-0.86[75] |
-0.94[76] |
-1.56[77] |
12 |
TSN |
Translin |
[78] |
0.68[79] |
0.51[80] |
-0.23[81] |
0.15[82] |
0.30[83] |
-0.27[84] |
13 |
POLR2C |
DNA-directed RNA polymerase II subunit RPB3 |
[85] |
1.20[86] |
0.95[87] |
0.60[88] |
0.06[89] |
0.33[90] |
-0.18[91] |
14 |
POLR2I |
DNA-directed RNA polymerase II subunit RPB9 |
[92] |
-1.20[93] |
-1.43[94] |
-1.37[95] |
-1.98[96] |
-1.85[97] |
-0.76[98] |
15 |
ELAC2 |
Zinc phosphodiesterase ELAC protein 2 |
[99] |
0.99[100] |
0.53[101] |
0.91[102] |
0.90[103] |
0.82[104] |
1.21[105] |
16 |
RAE1 |
mRNA export factor |
[106] |
0.96[107] |
0.31[108] |
-0.66[109] |
0.87[110] |
0.23[111] |
-0.75[112] |
17 |
POLR2B |
DNA-directed RNA polymerase II subunit RPB2 |
[113] |
1.60[114] |
1.63[115] |
1.71[116] |
1.40[117] |
2.15[118] |
1.22[119] |
18 |
POLR2D |
DNA-directed RNA polymerase II subunit RPB4 |
[120] |
0.64[121] |
0.41[122] |
-0.15[123] |
-0.11[124] |
0.16[125] |
-0.17[126] |
19 |
NUP88 |
Nuclear pore complex protein Nup88 |
[127] |
0.33[128] |
0.49[129] |
0.75[130] |
-0.03[131] |
0.51[132] |
1.38[133] |
20 |
SEH1L |
Nucleoporin SEH1 |
[134] |
0.61[135] |
0.74[136] |
1.34[137] |
0.87[138] |
0.14[139] |
0.45[140] |
21 |
NUP35 |
Nucleoporin NUP53 |
[141] |
-0.70[142] |
-0.48[143] |
-0.35[144] |
-0.80[145] |
-0.96[146] |
-0.95[147] |
22 |
POLR2A |
DNA-directed RNA polymerase II subunit RPB1 |
[148] |
3.11[149] |
1.29[150] |
2.44[151] |
2.45[152] |
2.89[153] |
2.06[154] |
23 |
PRKRA |
Interferon-inducible double-stranded
RNA-dependent protein kinase activator A |
0.73[155] |
1.18[156] |
0.38[157] |
0.32[158] |
0.24[159] |
-0.59[160] |
24 |
NUP62 |
Nuclear pore glycoprotein p62 |
[161] |
1.55[162] |
0.80[163] |
2.01[164] |
1.50[165] |
1.64[166] |
0.69[167] |
25 |
TSNAX |
Translin-associated protein X |
[168] |
-0.17[169] |
-0.05[170] |
0.27[171] |
1.18[172] |
0.45[173] |
0.12[174] |
26 |
NUP85 |
Nuclear pore complex protein Nup85 |
[175] |
1.12[176] |
1.12[177] |
1.52[178] |
0.87[179] |
1.12[180] |
0.49[181] |
27 |
AAAS |
Aladin |
[182] |
0.65[183] |
0.61[184] |
0.35[185] |
0.51[186] |
0.59[187] |
0.08[188] |
28 |
TARBP2 |
RISC-loading complex subunit TARBP2 |
[189] |
0.44[190] |
0.80[191] |
0.65[192] |
-0.05[193] |
0.14[194] |
-0.23[195] |
29 |
IPO8 |
Importin-8 |
[196] |
0.70[197] |
1.10[198] |
1.48[199] |
0.70[200] |
1.83[201] |
1.29[202] |
30 |
NUP50 |
Nuclear pore complex protein Nup50 |
[203] |
1.15[204] |
1.47[205] |
2.03[206] |
1.28[207] |
1.82[208] |
1.83[209] |
31 |
RANBP2 |
E3 SUMO-protein ligase RanBP2 |
[210] |
0.86[211] |
2.18[212] |
2.08[213] |
1.83[214] |
2.03[215] |
3.22[216] |
32 |
NUP93 |
Nuclear pore complex protein Nup93 |
[217] |
2.06[218] |
1.22[219] |
1.35[220] |
1.23[221] |
1.58[222] |
-0.24[223] |
33 |
NUP98 |
Nuclear pore complex protein Nup98-Nup96 |
[224] |
2.55[225] |
1.88[226] |
2.30[227] |
2.52[228] |
2.13[229] |
2.13[230] |
34 |
NUP54 |
Nucleoporin p54 |
[231] |
0.49[232] |
0.77[233] |
0.92[234] |
0.62[235] |
1.14[236] |
0.28[237] |
35 |
NUP107 |
Nuclear pore complex protein Nup107 |
[238] |
0.88[239] |
1.64[240] |
1.77[241] |
1.59[242] |
1.56[243] |
0.27[244] |
36 |
NUP37 |
Nucleoporin Nup37 |
[245] |
1.04[246] |
0.96[247] |
1.21[248] |
0.74[249] |
0.78[250] |
-1.16[251] |
37 |
TPR |
Nucleoprotein TPR |
[252] |
1.02[253] |
2.52[254] |
2.98[255] |
2.84[256] |
3.11[257] |
2.86[258] |
38 |
NUP160 |
Nuclear pore complex protein Nup160 |
[259] |
2.24[260] |
2.03[261] |
2.78[262] |
1.47[263] |
1.81[264] |
1.74[265] |
39 |
POM121 |
Nuclear envelope pore membrane protein POM 121 |
[266] |
1.83[267] |
1.82[268] |
1.81[269] |
1.84[270] |
1.33[271] |
1.56[272] |
40 |
NUP133 |
Nuclear pore complex protein Nup133 |
[273] |
1.57[274] |
1.56[275] |
2.67[276] |
2.50[277] |
1.89[278] |
1.32[279] |
41 |
XPO5 |
Exportin-5 |
[280] |
3.32[281] |
2.60[282] |
2.21[283] |
2.92[284] |
2.40[285] |
1.34[286] |
42 |
NUP153 |
Nuclear pore complex protein Nup153 |
[287] |
2.78[288] |
2.62[289] |
2.41[290] |
3.55[291] |
2.76[292] |
2.21[293] |
43 |
NUP43 |
Nucleoporin Nup43 |
[294] |
2.30[295] |
2.11[296] |
2.01[297] |
2.38[298] |
2.15[299] |
0.58[300] |
44 |
NUP205 |
Nuclear pore complex protein Nup205 |
[301] |
2.57[302] |
2.12[303] |
3.45[304] |
3.07[305] |
3.29[306] |
1.78[307] |
45 |
POM121C |
Nuclear envelope pore membrane protein POM 121C |
[308] |
1.66[309] |
0.57[310] |
0.39[311] |
1.70[312] |
1.17[313] |
0.70[314] |
46 |
DROSHA |
Ribonuclease 3 |
[315] |
1.87[316] |
1.48[317] |
1.66[318] |
2.25[319] |
2.66[320] |
1.17[321] |
47 |
DGCR8 |
Microprocessor complex subunit DGCR8 |
[322] |
1.70[323] |
1.15[324] |
1.49[325] |
1.55[326] |
1.79[327] |
1.75[328] |
48 |
NUP214 |
Nuclear pore complex protein Nup214 |
[329] |
2.41[330] |
1.36[331] |
2.63[332] |
2.48[333] |
2.45[334] |
2.03[335] |
49 |
DICER1 |
Endoribonuclease Dicer |
[336] |
2.07[337] |
2.85[338] |
1.76[339] |
3.43[340] |
2.32[341] |
4.19[342] |
50 |
TNRC6A |
Trinucleotide repeat-containing gene 6A protein |
[343] |
2.63[344] |
2.92[345] |
2.25[346] |
2.58[347] |
2.67[348] |
3.26[349] |
51 |
NUP188 |
Nucleoporin NUP188 homolog |
[350] |
3.64[351] |
2.66[352] |
3.45[353] |
2.81[354] |
4.03[355] |
2.09[356] |
52 |
NUP210 |
Nuclear pore membrane glycoprotein 210 |
[357] |
4.08[358] |
3.54[359] |
4.79[360] |
2.40[361] |
0.84[362] |
3.26[363] |
53 |
NUP155 |
Nuclear pore complex protein Nup155 |
[364] |
2.50[365] |
1.74[366] |
2.88[367] |
2.77[368] |
3.69[369] |
2.01[370] |
54 |
TDRKH |
Tudor and KH domain-containing protein |
[371] |
0.51[372] |
0.36[373] |
1.27[374] |
2.30[375] |
0.59[376] |
0.46[377] |
55 |
BCDIN3D |
Pre-miRNA 5'-monophosphate methyltransferase |
[378] |
-0.81[379] |
-1.12[380] |
-0.67[381] |
-0.56[382] |
-0.81[383] |
0.33[384] |
56 |
PLD6 |
Mitochondrial cardiolipin hydrolase |
[385] |
2.10[386] |
1.05[387] |
0.78[388] |
1.05[389] |
0.44[390] |
0.08[391] |
57 |
TNRC6B |
Trinucleotide repeat-containing gene 6B protein |
[392] |
2.61[393] |
2.46[394] |
4.29[395] |
3.01[396] |
3.03[397] |
5.61[398] |
58 |
MYBL1 |
Myb-related protein A |
[399] |
-0.34[400] |
1.08[401] |
0.72[402] |
2.87[403] |
2.53[404] |
-0.56[405] |
59 |
HENMT1 |
Small RNA 2'-O-methyltransferase |
[406] |
[407] |
-7.68[408] |
[409] |
-5.17[410] |
-0.43[411] |
-0.10[412] |
60 |
TNRC6C |
Trinucleotide repeat-containing gene 6C protein |
[413] |
2.47[414] |
2.06[415] |
2.49[416] |
1.06[417] |
1.09[418] |
3.57[419] |
61 |
PIWIL2 |
Piwi-like protein 2 |
[420] |
-0.74[421] |
1.54[422] |
1.84[423] |
-0.52[424] |
-1.03[425] |
1.30[426] |
62 |
TDRD1 |
Tudor domain-containing protein 1 |
[427] |
[428] |
[429] |
-4.50[430] |
-3.51[431] |
-5.34[432] |
0.65[433] |
63 |
MOV10L1 |
RNA helicase Mov10l1 |
[434] |
0.40[435] |
0.15[436] |
1.54[437] |
0.68[438] |
3.05[439] |
1.92[440] |
64 |
PIWIL1 |
Piwi-like protein 1 |
[441] |
[442] |
[443] |
[444] |
[445] |
[446] |
[447] |
65 |
PIWIL4 |
Piwi-like protein 4 |
[448] |
-4.10[449] |
-3.11[450] |
-4.09[451] |
3.73[452] |
2.43[453] |
3.96[454] |
66 |
MAEL |
Protein maelstrom homolog |
[455] |
-1.82[456] |
[457] |
[458] |
0.33[459] |
-0.33[460] |
3.24[461] |
67 |
TDRD6 |
Tudor domain-containing protein 6 |
[462] |
-2.24[463] |
0.36[464] |
7.97[465] |
0.81[466] |
3.22[467] |
7.52[468] |
68 |
TDRD9 |
ATP-dependent RNA helicase TDRD9 |
[469] |
1.26[470] |
[471] |
-1.82[472] |
-1.54[473] |
7.32[474] |
5.38[475] |
69 |
H3C7 |
|
[476] |
[477] |
[478] |
[479] |
[480] |
[481] |
[482] |
70 |
H2AX |
|
[483] |
[484] |
[485] |
[486] |
[487] |
[488] |
[489] |
71 |
H3C1 |
|
[490] |
[491] |
[492] |
[493] |
[494] |
[495] |
[496] |
72 |
H3C15 |
|
[497] |
[498] |
[499] |
[500] |
[501] |
[502] |
[503] |
73 |
DDX4 |
Probable ATP-dependent RNA helicase DDX4 |
[504] |
[505] |
[506] |
[507] |
[508] |
[509] |
[510] |
74 |
H3-3A |
|
[511] |
[512] |
[513] |
[514] |
[515] |
[516] |
[517] |
75 |
TDRD12 |
Putative ATP-dependent RNA helicase TDRD12 |
[518] |
[519] |
[520] |
[521] |
[522] |
[523] |
[524] |
76 |
H3C2 |
|
[525] |
[526] |
[527] |
[528] |
[529] |
[530] |
[531] |
77 |
FKBP6 |
Inactive peptidyl-prolyl cis-trans isomerase FKBP6 |
[532] |
[533] |
[534] |
[535] |
[536] |
[537] |
[538] |
78 |
H2BC4 |
|
[539] |
[540] |
[541] |
[542] |
[543] |
[544] |
[545] |
79 |
H4C14 |
|
[546] |
[547] |
[548] |
[549] |
[550] |
[551] |
[552] |
80 |
H4C6 |
|
[553] |
[554] |
[555] |
[556] |
[557] |
[558] |
[559] |
81 |
H2AJ |
|
[560] |
[561] |
[562] |
[563] |
[564] |
[565] |
[566] |
82 |
H2BC21 |
|
[567] |
[568] |
[569] |
[570] |
[571] |
[572] |
[573] |
83 |
H2AC4 |
|
[574] |
[575] |
[576] |
[577] |
[578] |
[579] |
[580] |
84 |
H2BC17 |
|
[581] |
[582] |
[583] |
[584] |
[585] |
[586] |
[587] |
85 |
NUP58 |
Nucleoporin p58/p45 |
[588] |
[589] |
[590] |
[591] |
[592] |
[593] |
[594] |
86 |
H2AC8 |
|
[595] |
[596] |
[597] |
[598] |
[599] |
[600] |
[601] |
87 |
H2AC14 |
|
[602] |
[603] |
[604] |
[605] |
[606] |
[607] |
[608] |
88 |
H2BC5 |
|
[609] |
[610] |
[611] |
[612] |
[613] |
[614] |
[615] |
89 |
AGO1 |
Protein argonaute-1 |
[616] |
[617] |
[618] |
[619] |
[620] |
[621] |
[622] |
90 |
H4C15 |
|
[623] |
[624] |
[625] |
[626] |
[627] |
[628] |
[629] |
91 |
H4C1 |
|
[630] |
[631] |
[632] |
[633] |
[634] |
[635] |
[636] |
92 |
H2BC14 |
|
[637] |
[638] |
[639] |
[640] |
[641] |
[642] |
[643] |
93 |
H2BC8 |
|
[644] |
[645] |
[646] |
[647] |
[648] |
[649] |
[650] |
94 |
H2BC12 |
|
[651] |
[652] |
[653] |
[654] |
[655] |
[656] |
[657] |
95 |
H4C2 |
|
[658] |
[659] |
[660] |
[661] |
[662] |
[663] |
[664] |
96 |
H2BC13 |
|
[665] |
[666] |
[667] |
[668] |
[669] |
[670] |
[671] |
97 |
H3C14 |
|
[672] |
[673] |
[674] |
[675] |
[676] |
[677] |
[678] |
98 |
H2BC11 |
|
[679] |
[680] |
[681] |
[682] |
[683] |
[684] |
[685] |
99 |
H3C6 |
|
[686] |
[687] |
[688] |
[689] |
[690] |
[691] |
[692] |
100 |
AGO2 |
Protein argonaute-2 |
[693] |
[694] |
[695] |
[696] |
[697] |
[698] |
[699] |
101 |
H4C12 |
|
[700] |
[701] |
[702] |
[703] |
[704] |
[705] |
[706] |
102 |
H2BS1 |
|
[707] |
[708] |
[709] |
[710] |
[711] |
[712] |
[713] |
103 |
AGO3 |
Protein argonaute-3 |
[714] |
[715] |
[716] |
[717] |
[718] |
[719] |
[720] |
104 |
H4C9 |
|
[721] |
[722] |
[723] |
[724] |
[725] |
[726] |
[727] |
105 |
H3C11 |
|
[728] |
[729] |
[730] |
[731] |
[732] |
[733] |
[734] |
106 |
H3C4 |
|
[735] |
[736] |
[737] |
[738] |
[739] |
[740] |
[741] |
107 |
H3C8 |
|
[742] |
[743] |
[744] |
[745] |
[746] |
[747] |
[748] |
108 |
MIR23B |
|
[749] |
[750] |
[751] |
[752] |
[753] |
[754] |
[755] |
109 |
H4C3 |
|
[756] |
[757] |
[758] |
[759] |
[760] |
[761] |
[762] |
110 |
H2AZ2 |
|
[763] |
[764] |
[765] |
[766] |
[767] |
[768] |
[769] |
111 |
H2BC3 |
|
[770] |
[771] |
[772] |
[773] |
[774] |
[775] |
[776] |
112 |
H2AC7 |
|
[777] |
[778] |
[779] |
[780] |
[781] |
[782] |
[783] |
113 |
H4C13 |
|
[784] |
[785] |
[786] |
[787] |
[788] |
[789] |
[790] |
114 |
H3-3B |
|
[791] |
[792] |
[793] |
[794] |
[795] |
[796] |
[797] |
115 |
H2AC20 |
|
[798] |
[799] |
[800] |
[801] |
[802] |
[803] |
[804] |
116 |
ASZ1 |
Ankyrin repeat, SAM and basic
leucine zipper domain-containing protein 1 |
[805] |
[806] |
[807] |
[808] |
[809] |
[810] |
117 |
H4-16 |
|
[811] |
[812] |
[813] |
[814] |
[815] |
[816] |
[817] |
118 |
H2BC7 |
|
[818] |
[819] |
[820] |
[821] |
[822] |
[823] |
[824] |
119 |
H2BC9 |
|
[825] |
[826] |
[827] |
[828] |
[829] |
[830] |
[831] |
120 |
H3C12 |
|
[832] |
[833] |
[834] |
[835] |
[836] |
[837] |
[838] |
121 |
H2AB1 |
|
[839] |
[840] |
[841] |
[842] |
[843] |
[844] |
[845] |
122 |
H2BC15 |
|
[846] |
[847] |
[848] |
[849] |
[850] |
[851] |
[852] |
123 |
H4C11 |
|
[853] |
[854] |
[855] |
[856] |
[857] |
[858] |
[859] |
124 |
H4C4 |
|
[860] |
[861] |
[862] |
[863] |
[864] |
[865] |
[866] |
125 |
H4C8 |
|
[867] |
[868] |
[869] |
[870] |
[871] |
[872] |
[873] |
126 |
AGO4 |
Protein argonaute-4 |
[874] |
[875] |
[876] |
[877] |
[878] |
[879] |
[880] |
127 |
H2BC1 |
|
[881] |
[882] |
[883] |
[884] |
[885] |
[886] |
[887] |
128 |
H3C3 |
|
[888] |
[889] |
[890] |
[891] |
[892] |
[893] |
[894] |
129 |
H4C5 |
|
[895] |
[896] |
[897] |
[898] |
[899] |
[900] |
[901] |
130 |
NDC1 |
Nucleoporin NDC1 |
[902] |
[903] |
[904] |
[905] |
[906] |
[907] |
[908] |
131 |
H2AZ1 |
|
[909] |
[910] |
[911] |
[912] |
[913] |
[914] |
[915] |
132 |
NUP42 |
|
[916] |
[917] |
[918] |
[919] |
[920] |
[921] |
[922] |
133 |
H2BC10 |
|
[923] |
[924] |
[925] |
[926] |
[927] |
[928] |
[929] |
134 |
H2BC6 |
|
[930] |
[931] |
[932] |
[933] |
[934] |
[935] |
[936] |
135 |
H3C13 |
|
[937] |
[938] |
[939] |
[940] |
[941] |
[942] |
[943] |
136 |
H2BU1 |
|
[944] |
[945] |
[946] |
[947] |
[948] |
[949] |
[950] |
137 |
H3C10 |
|
[951] |
[952] |
[953] |
[954] |
[955] |
[956] |
[957] |
138 |
H2AC6 |
|
[958] |
[959] |
[960] |
[961] |
[962] |
[963] |
[964] |
|
|
|
|
|
|
|
|
|
|