REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX |
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Order |
Gene |
Description |
ref_hepatocyte |
HepG2 |
HepG2.C3A |
HuH.7 |
SNU475 |
THLE |
liver |
1 |
POLR2L |
DNA-directed RNA polymerases I, II, and III subunit RPABC5 |
[1] |
-2.47[2] |
-2.55[3] |
-2.80[4] |
-1.81[5] |
-2.06[6] |
-0.69[7] |
2 |
POLR2J |
DNA-directed RNA polymerase II subunit RPB11-a |
[8] |
-3.17[9] |
-2.95[10] |
-2.68[11] |
-3.04[12] |
-2.90[13] |
-2.44[14] |
3 |
POLR2E |
DNA-directed RNA polymerases I, II, and III subunit RPABC1 |
[15] |
0.61[16] |
0.50[17] |
0.57[18] |
-0.18[19] |
0.50[20] |
1.13[21] |
4 |
POLR2H |
DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
[22] |
-1.57[23] |
-1.01[24] |
-1.06[25] |
-2.29[26] |
-1.78[27] |
-1.31[28] |
5 |
POLR2F |
DNA-directed RNA polymerases I, II, and III subunit RPABC2 |
[29] |
-1.26[30] |
-1.09[31] |
-1.93[32] |
-2.22[33] |
-1.66[34] |
-0.42[35] |
6 |
POLR2K |
DNA-directed RNA polymerases I, II, and III subunit RPABC4 |
[36] |
-1.58[37] |
-0.80[38] |
-0.93[39] |
-0.57[40] |
-0.85[41] |
-0.63[42] |
7 |
POLR2G |
DNA-directed RNA polymerase II subunit RPB7 |
[43] |
-1.16[44] |
-0.95[45] |
-1.47[46] |
-0.77[47] |
-1.08[48] |
-1.18[49] |
8 |
SUPT5H |
Transcription elongation factor SPT5 |
[50] |
0.29[51] |
-0.09[52] |
0.86[53] |
0.83[54] |
0.47[55] |
0.30[56] |
9 |
GTF2F2 |
General transcription factor IIF subunit 2 |
[57] |
-1.94[58] |
-1.38[59] |
-1.08[60] |
-1.74[61] |
-1.69[62] |
-1.94[63] |
10 |
SUPT4H1 |
Transcription elongation factor SPT4 |
[64] |
-0.24[65] |
-0.22[66] |
-0.66[67] |
-1.26[68] |
-0.85[69] |
-1.18[70] |
11 |
NCBP2 |
Nuclear cap-binding protein subunit 2 |
[71] |
-0.46[72] |
-0.07[73] |
-0.01[74] |
-0.49[75] |
-0.41[76] |
-0.69[77] |
12 |
POLR2C |
DNA-directed RNA polymerase II subunit RPB3 |
[78] |
0.82[79] |
0.87[80] |
0.34[81] |
0.15[82] |
0.19[83] |
0.19[84] |
13 |
CCNH |
Cyclin-H |
[85] |
-1.66[86] |
-0.88[87] |
-1.51[88] |
-1.39[89] |
-0.19[90] |
-0.28[91] |
14 |
POLR2I |
DNA-directed RNA polymerase II subunit RPB9 |
[92] |
-1.58[93] |
-1.52[94] |
-1.62[95] |
-1.89[96] |
-1.99[97] |
-0.39[98] |
15 |
ERCC3 |
TFIIH basal transcription factor complex helicase XPB subunit |
[99] |
-0.11[100] |
0.07[101] |
-0.54[102] |
-0.06[103] |
0.20[104] |
-0.05[105] |
16 |
GTF2F1 |
General transcription factor IIF subunit 1 |
[106] |
0.39[107] |
-0.08[108] |
1.37[109] |
-0.01[110] |
0.32[111] |
-0.62[112] |
17 |
CDK7 |
Cyclin-dependent kinase 7 |
[113] |
-0.64[114] |
0.30[115] |
0.00[116] |
-0.18[117] |
-0.69[118] |
-1.71[119] |
18 |
POLR2B |
DNA-directed RNA polymerase II subunit RPB2 |
[120] |
1.22[121] |
1.54[122] |
1.45[123] |
1.49[124] |
2.01[125] |
1.60[126] |
19 |
GTF2H2 |
General transcription factor IIH subunit 2 |
[127] |
-5.40[128] |
-4.52[129] |
-4.75[130] |
-4.80[131] |
-6.23[132] |
-4.03[133] |
20 |
POLR2D |
DNA-directed RNA polymerase II subunit RPB4 |
[134] |
0.26[135] |
0.32[136] |
-0.41[137] |
-0.02[138] |
0.02[139] |
0.21[140] |
21 |
GTF2H1 |
General transcription factor IIH subunit 1 |
[141] |
0.23[142] |
0.34[143] |
0.27[144] |
0.98[145] |
0.35[146] |
0.81[147] |
22 |
POLR2A |
DNA-directed RNA polymerase II subunit RPB1 |
[148] |
2.73[149] |
1.20[150] |
2.18[151] |
2.54[152] |
2.75[153] |
2.44[154] |
23 |
GTF2H4 |
General transcription factor IIH subunit 4 |
[155] |
-0.25[156] |
0.16[157] |
0.23[158] |
0.70[159] |
-0.26[160] |
-1.02[161] |
24 |
MNAT1 |
CDK-activating kinase assembly factor MAT1 |
[162] |
-0.61[163] |
0.62[164] |
-0.22[165] |
0.77[166] |
0.13[167] |
-0.31[168] |
25 |
NCBP1 |
Nuclear cap-binding protein subunit 1 |
[169] |
1.26[170] |
1.41[171] |
1.21[172] |
2.14[173] |
2.50[174] |
1.88[175] |
26 |
GTF2H3 |
General transcription factor IIH subunit 3 |
[176] |
1.21[177] |
1.56[178] |
1.50[179] |
1.74[180] |
1.34[181] |
0.77[182] |
27 |
ERCC2 |
TFIIH basal transcription factor complex helicase XPD subunit |
[183] |
1.12[184] |
1.11[185] |
1.52[186] |
1.70[187] |
1.43[188] |
-0.18[189] |
28 |
CTDP1 |
RNA polymerase II subunit A C-terminal domain phosphatase |
[190] |
1.35[191] |
0.52[192] |
0.50[193] |
0.82[194] |
0.85[195] |
0.96[196] |
29 |
GTF2H5 |
General transcription factor IIH subunit 5 |
[197] |
1.60[198] |
1.93[199] |
1.74[200] |
1.66[201] |
1.64[202] |
1.67[203] |
30 |
NELFB |
Negative elongation factor B |
[204] |
[205] |
[206] |
[207] |
[208] |
[209] |
[210] |
31 |
NELFCD |
Negative elongation factor C/D |
[211] |
[212] |
[213] |
[214] |
[215] |
[216] |
[217] |
32 |
NELFA |
Negative elongation factor A |
[218] |
[219] |
[220] |
[221] |
[222] |
[223] |
[224] |
33 |
NELFE |
Negative elongation factor E |
[225] |
[226] |
[227] |
[228] |
[229] |
[230] |
[231] |
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