REACTOME_EARLY_PHASE_OF_HIV_LIFE_CYCLE Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 PPIA Peptidyl-prolyl cis-trans isomerase A [1] -0.14[2] 0.13[3] 0.22[4] 0.15[5] -0.08[6] 0.43[7]
2 XRCC6 X-ray repair cross-complementing protein 6 [8] -0.04[9] -0.27[10] -0.32[11] -0.48[12] -0.58[13] -0.65[14]
3 BANF1 Barrier-to-autointegration factor [15] -2.05[16] -1.82[17] -2.49[18] -1.51[19] -2.00[20] -2.00[21]
4 HMGA1 High mobility group protein HMG-I/HMG-Y [22] 0.70[23] -0.23[24] 0.01[25] -0.39[26] 0.41[27] -4.06[28]
5 XRCC5 X-ray repair cross-complementing protein 5 [29] 1.03[30] 1.26[31] 0.90[32] 1.20[33] 1.08[34] 0.96[35]
6 CD4 T-cell surface glycoprotein CD4 [36] -5.79[37] -3.48[38] -6.35[39] -7.07[40] -9.47[41] 0.73[42]
7 PSIP1 PC4 and SFRS1-interacting protein [43] -1.14[44] -0.02[45] 0.37[46] 0.88[47] 1.55[48] 0.07[49]
8 FEN1 Flap endonuclease 1 [50] 0.99[51] 0.91[52] 1.53[53] 1.06[54] 1.61[55] -0.28[56]
9 KPNA1 Importin subunit alpha-5 [57] 1.02[58] 1.20[59] 1.06[60] 1.97[61] 1.92[62] 2.99[63]
10 LIG1 DNA ligase 1 [64] 1.59[65] 1.74[66] 2.14[67] 0.89[68] 1.28[69] 0.45[70]
11 LIG4 DNA ligase 4 [71] -1.24[72] 0.80[73] -0.55[74] 1.16[75] 0.61[76] 2.30[77]
12 CXCR4 C-X-C chemokine receptor type 4 [78] -1.90[79] [80] -2.48[81] -5.18[82] -1.69[83] 0.75[84]
13 XRCC4 DNA repair protein XRCC4 [85] -0.63[86] 1.10[87] 0.65[88] 0.58[89] 0.21[90] 0.06[91]
14 CCR5 C-C chemokine receptor type 5 [92] -6.16[93] [94] 1.95[95] -5.65[96] [97] 1.38[98]
[1]
ref_hepatocyte PPIA
Mean 240
Standard deviation 74
Values 1.4e+02 2.9e+02 1.9e+02 3.2e+02 2.5e+02
[2]
HepG2 PPIA
Mean 492
Standard deviation 1e+02
Values 4.2e+02 5.6e+02
[3]
HepG2.C3A PPIA
Mean 483
Standard deviation 1.5e+02
Values 3.8e+02 5.9e+02
[4]
HuH.7 PPIA
Mean 582
Standard deviation 2.2e+02
Values 5.6e+02 3.8e+02 8.1e+02
[5]
SNU475 PPIA
Mean 374
Standard deviation 68
Values 4.2e+02 3.3e+02
[6]
THLE PPIA
Mean 455
Standard deviation 72
Values 4e+02 5.1e+02
[7]
liver PPIA
Mean 261
Standard deviation 2.1e+02
Values 4.6e+02 87 4.3e+02 66
[8]
ref_hepatocyte XRCC6
Mean 131
Standard deviation 74
Values 1.7e+02 2.4e+02 1.2e+02 73 58
[9]
HepG2 XRCC6
Mean 289
Standard deviation 39
Values 2.6e+02 3.2e+02
[10]
HepG2.C3A XRCC6
Mean 200
Standard deviation 42
Values 1.7e+02 2.3e+02
[11]
HuH.7 XRCC6
Mean 220
Standard deviation 54
Values 2.6e+02 1.6e+02 2.4e+02
[12]
SNU475 XRCC6
Mean 132
Standard deviation 1.1
Values 1.3e+02 1.3e+02
[13]
THLE XRCC6
Mean 176
Standard deviation 61
Values 1.3e+02 2.2e+02
[14]
liver XRCC6
Mean 67.3
Standard deviation 21
Values 80 58 89 42
[15]
ref_hepatocyte BANF1
Mean 94
Standard deviation 30
Values 1.3e+02 1.2e+02 82 60 77
[16]
HepG2 BANF1
Mean 51.3
Standard deviation 3.2
Values 49 54
[17]
HepG2.C3A BANF1
Mean 49.2
Standard deviation 10
Values 42 56
[18]
HuH.7 BANF1
Mean 35
Standard deviation 13
Values 36 22 47
[19]
SNU475 BANF1
Mean 46.4
Standard deviation 4.2
Values 49 43
[20]
THLE BANF1
Mean 47.2
Standard deviation 7.6
Values 42 53
[21]
liver BANF1
Mean 19
Standard deviation 19
Values 35 2.4 37 2
[22]
ref_hepatocyte HMGA1
Mean 79
Standard deviation 95
Values 27 1.3e+02 2.3e+02 6.2 10
[23]
HepG2 HMGA1
Mean 291
Standard deviation 1.5e+02
Values 3.9e+02 1.9e+02
[24]
HepG2.C3A HMGA1
Mean 124
Standard deviation 23
Values 1.1e+02 1.4e+02
[25]
HuH.7 HMGA1
Mean 167
Standard deviation 39
Values 2e+02 1.2e+02 1.8e+02
[26]
SNU475 HMGA1
Mean 84.9
Standard deviation 63
Values 41 1.3e+02
[27]
THLE HMGA1
Mean 212
Standard deviation 88
Values 1.5e+02 2.7e+02
[28]
liver HMGA1
Mean 3.84
Standard deviation 3.2
Values 7.1 0.86 6 1.4
[29]
ref_hepatocyte XRCC5
Mean 49.2
Standard deviation 25
Values 80 72 28 35 31
[30]
HepG2 XRCC5
Mean 227
Standard deviation 47
Values 1.9e+02 2.6e+02
[31]
HepG2.C3A XRCC5
Mean 218
Standard deviation 87
Values 1.6e+02 2.8e+02
[32]
HuH.7 XRCC5
Mean 192
Standard deviation 57
Values 2.4e+02 1.3e+02 2.1e+02
[33]
SNU475 XRCC5
Mean 160
Standard deviation 1.4
Values 1.6e+02 1.6e+02
[34]
THLE XRCC5
Mean 209
Standard deviation 38
Values 1.8e+02 2.4e+02
[35]
liver XRCC5
Mean 77.5
Standard deviation 10
Values 78 81 87 63
[36]
ref_hepatocyte CD4
Mean 14.9
Standard deviation 25
Values 0.42 0 1.1 15 59
[37]
HepG2 CD4
Mean 0.611
Standard deviation 0.26
Values 0.42 0.8
[38]
HepG2.C3A CD4
Mean 2.47
Standard deviation 0.32
Values 2.2 2.7
[39]
HuH.7 CD4
Mean 0.383
Standard deviation 0.15
Values 0.28 0.55 0.32
[40]
SNU475 CD4
Mean 0.157
Standard deviation 0.028
Values 0.18 0.14
[41]
THLE CD4
Mean 0.0423
Standard deviation 0.0071
Values 0.047 0.037
[42]
liver CD4
Mean 20
Standard deviation 8
Values 22 15 30 13
[43]
ref_hepatocyte PSIP1
Mean 11.3
Standard deviation 8.9
Values 22 19 5.5 3.2 5.9
[44]
HepG2 PSIP1
Mean 11.6
Standard deviation 0.53
Values 11 12
[45]
HepG2.C3A PSIP1
Mean 20.6
Standard deviation 2.5
Values 19 22
[46]
HuH.7 PSIP1
Mean 30.6
Standard deviation 9.2
Values 35 20 37
[47]
SNU475 PSIP1
Mean 29.1
Standard deviation 2.1
Values 31 28
[48]
THLE PSIP1
Mean 66.5
Standard deviation 7.6
Values 72 61
[49]
liver PSIP1
Mean 9.56
Standard deviation 3.2
Values 14 8.5 9.9 6.1
[50]
ref_hepatocyte FEN1
Mean 8.88
Standard deviation 4.9
Values 17 9.6 7.8 7 3.4
[51]
HepG2 FEN1
Mean 40
Standard deviation 13
Values 31 49
[52]
HepG2.C3A FEN1
Mean 30.8
Standard deviation 20
Values 17 45
[53]
HuH.7 FEN1
Mean 53.6
Standard deviation 31
Values 63 19 79
[54]
SNU475 FEN1
Mean 26.1
Standard deviation 5.2
Values 22 30
[55]
THLE FEN1
Mean 54.6
Standard deviation 11
Values 47 62
[56]
liver FEN1
Mean 5.91
Standard deviation 2.9
Values 3.7 5.8 10 4.1
[57]
ref_hepatocyte KPNA1
Mean 5.92
Standard deviation 2.1
Values 4.8 9.6 4.9 4.9 5.3
[58]
HepG2 KPNA1
Mean 27.1
Standard deviation 7
Values 22 32
[59]
HepG2.C3A KPNA1
Mean 25.1
Standard deviation 1.6
Values 24 26
[60]
HuH.7 KPNA1
Mean 25.8
Standard deviation 2.3
Values 28 25 24
[61]
SNU475 KPNA1
Mean 32.6
Standard deviation 0.51
Values 32 33
[62]
THLE KPNA1
Mean 45.2
Standard deviation 4
Values 42 48
[63]
liver KPNA1
Mean 38
Standard deviation 4.3
Values 40 36 43 33
[64]
ref_hepatocyte LIG1
Mean 3.08
Standard deviation 2.7
Values 7.4 3.8 0.82 2.1 1.3
[65]
HepG2 LIG1
Mean 21.1
Standard deviation 4.6
Values 18 24
[66]
HepG2.C3A LIG1
Mean 19
Standard deviation 5
Values 15 23
[67]
HuH.7 LIG1
Mean 28.4
Standard deviation 13
Values 35 13 37
[68]
SNU475 LIG1
Mean 8.05
Standard deviation 0.33
Values 8.3 7.8
[69]
THLE LIG1
Mean 15.1
Standard deviation 4
Values 12 18
[70]
liver LIG1
Mean 3.39
Standard deviation 0.66
Values 3.3 3.3 4.3 2.7
[71]
ref_hepatocyte LIG4
Mean 2.34
Standard deviation 2.7
Values 1.1 7.2 0.77 1.2 1.4
[72]
HepG2 LIG4
Mean 2.23
Standard deviation 0.57
Values 1.8 2.6
[73]
HepG2.C3A LIG4
Mean 7.5
Standard deviation 2.4
Values 9.2 5.8
[74]
HuH.7 LIG4
Mean 3.33
Standard deviation 0.78
Values 2.8 4.2 2.9
[75]
SNU475 LIG4
Mean 7.33
Standard deviation 1.1
Values 6.6 8.1
[76]
THLE LIG4
Mean 7.2
Standard deviation 1
Values 7.9 6.5
[77]
liver LIG4
Mean 9.32
Standard deviation 2.7
Values 8.1 13 8.1 7.7
[78]
ref_hepatocyte CXCR4
Mean 2.08
Standard deviation 2.5
Values 0.14 0 1.9 2.1 6.2
[79]
HepG2 CXCR4
Mean 1.26
Standard deviation 0.15
Values 1.2 1.4
[80]
HepG2.C3A CXCR4
Mean 0
Standard deviation 0
Values 0 0
[81]
HuH.7 CXCR4
Mean 0.781
Standard deviation 0.18
Values 0.58 0.84 0.92
[82]
SNU475 CXCR4
Mean 0.0809
Standard deviation 0.11
Values 0.0046 0.16
[83]
THLE CXCR4
Mean 1.29
Standard deviation 0.58
Values 1.7 0.88
[84]
liver CXCR4
Mean 2.82
Standard deviation 1.4
Values 4.6 2 3.1 1.5
[85]
ref_hepatocyte XRCC4
Mean 1.95
Standard deviation 0.62
Values 2.8 1.4 1.3 2 2.3
[86]
HepG2 XRCC4
Mean 2.86
Standard deviation 0.8
Values 2.3 3.4
[87]
HepG2.C3A XRCC4
Mean 7.71
Standard deviation 4.4
Values 4.6 11
[88]
HuH.7 XRCC4
Mean 6.38
Standard deviation 0.78
Values 6.3 5.6 7.2
[89]
SNU475 XRCC4
Mean 4.1
Standard deviation 0.37
Values 3.8 4.4
[90]
THLE XRCC4
Mean 4.53
Standard deviation 0.45
Values 4.2 4.9
[91]
liver XRCC4
Mean 1.65
Standard deviation 0.81
Values 1.8 1.4 2.7 0.77
[92]
ref_hepatocyte CCR5
Mean 0.0903
Standard deviation 0.16
Values 0 0 0 0.078 0.37
[93]
HepG2 CCR5
Mean 0.00287
Standard deviation 0.0041
Values 0.0057 0
[94]
HepG2.C3A CCR5
Mean 0
Standard deviation 0
Values 0 0
[95]
HuH.7 CCR5
Mean 0.728
Standard deviation 0.29
Values 0.52 1.1 0.61
[96]
SNU475 CCR5
Mean 0.00253
Standard deviation 0.0036
Values 0 0.0051
[97]
THLE CCR5
Mean 0
Standard deviation 0
Values 0 0
[98]
liver CCR5
Mean 0.189
Standard deviation 0.14
Values 0.071 0.21 0.1 0.37