REACTOME_DUAL_INCISION_IN_GG_NER | Return to index | ||||||||
Order | Gene | Description | ref_hepatocyte | HepG2 | HepG2.C3A | HuH.7 | SNU475 | THLE | liver |
1 | UBB | Polyubiquitin-B | [1] | -0.87[2] | -1.10[3] | -1.23[4] | -1.31[5] | -0.98[6] | -0.28[7] |
2 | RPS27A | Ubiquitin-40S ribosomal protein S27a | [8] | [9] | [10] | [11] | [12] | [13] | [14] |
3 | UBC | Polyubiquitin-C | [15] | -0.43[16] | -0.35[17] | -0.87[18] | -0.46[19] | -0.60[20] | 0.17[21] |
4 | UBA52 | Ubiquitin-60S ribosomal protein L40 | [22] | 2.01[23] | 1.89[24] | 2.64[25] | 0.94[26] | 1.63[27] | 0.94[28] |
5 | RBX1 | E3 ubiquitin-protein ligase RBX1 | [29] | -0.73[30] | -0.33[31] | -0.72[32] | -1.24[33] | -0.93[34] | -0.50[35] |
6 | PARP1 | Poly [ADP-ribose] polymerase 1 | [36] | 1.46[37] | 1.18[38] | 1.64[39] | 1.99[40] | 1.39[41] | 1.18[42] |
7 | PCNA | Proliferating cell nuclear antigen | [43] | 2.22[44] | 2.17[45] | 0.48[46] | 1.25[47] | 1.41[48] | -1.48[49] |
8 | POLD2 | DNA polymerase delta subunit 2 | [50] | 0.73[51] | 0.87[52] | 1.10[53] | 0.60[54] | 0.85[55] | 1.47[56] |
9 | POLD4 | DNA polymerase delta subunit 4 | [57] | -0.80[58] | -1.18[59] | 0.62[60] | 2.91[61] | -0.80[62] | 1.12[63] |
10 | DDB1 | DNA damage-binding protein 1 | [64] | 2.94[65] | 2.28[66] | 3.13[67] | 2.31[68] | 2.22[69] | 2.19[70] |
11 | POLE3 | DNA polymerase epsilon subunit 3 | [71] | 0.54[72] | 0.37[73] | 0.38[74] | 0.41[75] | 1.33[76] | 0.02[77] |
12 | POLE4 | DNA polymerase epsilon subunit 4 | [78] | 0.28[79] | 0.99[80] | -2.75[81] | -0.16[82] | -0.75[83] | -0.21[84] |
13 | RPA2 | Replication protein A 32 kDa subunit | [85] | -0.13[86] | -0.08[87] | 0.19[88] | 0.72[89] | 0.68[90] | -0.80[91] |
14 | CUL4A | Cullin-4A | [92] | 1.56[93] | 1.82[94] | 0.83[95] | 1.40[96] | 1.08[97] | 2.17[98] |
15 | ERCC3 | TFIIH basal transcription factor complex helicase XPB subunit | [99] | 1.21[100] | 1.44[101] | 0.56[102] | 1.02[103] | 1.35[104] | 0.90[105] |
16 | ERCC1 | DNA excision repair protein ERCC-1 | [106] | 0.84[107] | 0.67[108] | 0.54[109] | 0.81[110] | 1.11[111] | 0.53[112] |
17 | CHD1L | Chromodomain-helicase-DNA-binding protein 1-like | [113] | 2.42[114] | 2.48[115] | 1.84[116] | 2.44[117] | 0.96[118] | 1.66[119] |
18 | RFC4 | Replication factor C subunit 4 | [120] | 0.36[121] | 0.96[122] | 1.26[123] | 0.50[124] | 1.71[125] | -1.16[126] |
19 | GTF2H2 | General transcription factor IIH subunit 2 | [127] | -4.07[128] | -3.15[129] | -3.65[130] | -3.72[131] | -5.09[132] | -3.08[133] |
20 | PARP2 | Poly [ADP-ribose] polymerase 2 | [134] | 1.25[135] | 0.86[136] | 1.33[137] | 1.19[138] | 1.84[139] | 0.12[140] |
21 | RFC1 | Replication factor C subunit 1 | [141] | 1.47[142] | 2.73[143] | 2.83[144] | 1.79[145] | 2.51[146] | 2.37[147] |
22 | RFC2 | Replication factor C subunit 2 | [148] | 1.06[149] | 0.89[150] | 0.65[151] | 1.65[152] | 1.98[153] | 0.82[154] |
23 | RPA1 | Replication protein A 70 kDa DNA-binding subunit | [155] | 2.64[156] | 2.35[157] | 2.34[158] | 3.32[159] | 3.21[160] | 1.60[161] |
24 | RPA3 | Replication protein A 14 kDa subunit | [162] | 0.96[163] | 1.73[164] | 2.17[165] | 0.56[166] | 0.73[167] | 0.90[168] |
25 | GTF2H1 | General transcription factor IIH subunit 1 | [169] | 1.55[170] | 1.71[171] | 1.37[172] | 2.06[173] | 1.50[174] | 1.76[175] |
26 | GTF2H4 | General transcription factor IIH subunit 4 | [176] | 1.08[177] | 1.52[178] | 1.33[179] | 1.78[180] | 0.89[181] | -0.07[182] |
27 | XPA | DNA repair protein complementing XP-A cells | [183] | -1.01[184] | -0.16[185] | -0.77[186] | -0.46[187] | -0.41[188] | 0.91[189] |
28 | CUL4B | Cullin-4B | [190] | 1.23[191] | 2.59[192] | 3.79[193] | 3.78[194] | 4.59[195] | 2.47[196] |
29 | DDB2 | DNA damage-binding protein 2 | [197] | 2.41[198] | 1.90[199] | 0.31[200] | -0.14[201] | 0.32[202] | 0.07[203] |
30 | RFC5 | Replication factor C subunit 5 | [204] | 1.46[205] | 1.89[206] | 1.80[207] | 1.73[208] | 2.14[209] | 0.72[210] |
31 | ERCC5 | DNA repair protein complementing XP-G cells | [211] | -3.45[212] | -2.68[213] | -2.97[214] | -2.28[215] | -2.59[216] | -0.64[217] |
32 | GTF2H3 | General transcription factor IIH subunit 3 | [218] | 2.53[219] | 2.93[220] | 2.60[221] | 2.82[222] | 2.48[223] | 1.72[224] |
33 | ERCC2 | TFIIH basal transcription factor complex helicase XPD subunit | [225] | 2.45[226] | 2.47[227] | 2.62[228] | 2.78[229] | 2.58[230] | 0.77[231] |
34 | RFC3 | Replication factor C subunit 3 | [232] | 2.50[233] | 3.34[234] | 3.20[235] | 2.72[236] | 3.19[237] | 0.73[238] |
35 | GTF2H5 | General transcription factor IIH subunit 5 | [239] | 2.92[240] | 3.30[241] | 2.84[242] | 2.74[243] | 2.79[244] | 2.62[245] |
36 | POLD1 | DNA polymerase delta catalytic subunit | [246] | 3.18[247] | 3.38[248] | 3.92[249] | 3.29[250] | 3.93[251] | 2.26[252] |
37 | POLK | DNA polymerase kappa | [253] | 0.48[254] | 1.93[255] | 1.90[256] | 3.30[257] | 2.91[258] | 3.69[259] |
38 | POLD3 | DNA polymerase delta subunit 3 | [260] | 2.50[261] | 2.35[262] | 3.03[263] | 3.58[264] | 3.95[265] | 2.58[266] |
39 | POLE | DNA polymerase epsilon catalytic subunit A | [267] | 4.37[268] | 4.97[269] | 4.74[270] | 4.20[271] | 5.09[272] | 4.53[273] |
40 | POLE2 | DNA polymerase epsilon subunit 2 | [274] | 2.03[275] | 2.80[276] | 3.51[277] | 2.62[278] | 3.04[279] | 0.44[280] |
41 | ERCC4 | DNA repair endonuclease XPF | [281] | 3.54[282] | 3.20[283] | 3.08[284] | 3.69[285] | 3.72[286] | 4.01[287] |