REACTOME_DNA_DAMAGE_TELOMERE_STRESS_INDUCED_SENESCENCE Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 HMGA1 High mobility group protein HMG-I/HMG-Y [1] -0.19[2] -1.23[3] -0.62[4] -1.10[5] -0.39[6] -4.46[7]
2 CDKN1A Cyclin-dependent kinase inhibitor 1 [8] -0.09[9] -1.46[10] -4.02[11] -2.31[12] -0.21[13] -1.43[14]
3 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 [15] -1.54[16] -1.18[17] -1.06[18] -1.23[19] -1.28[20] -0.48[21]
4 CDKN1B Cyclin-dependent kinase inhibitor 1B [22] -1.01[23] -0.55[24] -0.23[25] -1.43[26] -1.42[27] -0.50[28]
5 CDK2 Cyclin-dependent kinase 2 [29] -1.34[30] -1.15[31] -0.65[32] -0.35[33] -0.20[34] -1.78[35]
6 TINF2 TERF1-interacting nuclear factor 2 [36] -0.16[37] -1.48[38] -1.36[39] -0.42[40] -0.87[41] 0.21[42]
7 LMNB1 Lamin-B1 [43] 0.05[44] 0.11[45] 0.29[46] 0.99[47] 0.18[48] -1.80[49]
8 KAT5 Histone acetyltransferase KAT5 [50] -1.71[51] -1.27[52] -2.18[53] -1.16[54] -1.69[55] -0.66[56]
9 NBN Nibrin [57] -1.35[58] -0.14[59] -0.26[60] 1.18[61] -0.15[62] 1.68[63]
10 HIRA Protein HIRA [64] 0.58[65] 1.03[66] 1.12[67] 0.17[68] 0.12[69] 1.16[70]
11 TP53 Cellular tumor antigen p53 [71] 0.71[72] 0.29[73] 1.18[74] 0.97[75] 0.18[76] 0.37[77]
12 ASF1A Histone chaperone ASF1A [78] -0.09[79] 0.61[80] -0.43[81] 0.91[82] 0.05[83] 0.44[84]
13 UBN1 Ubinuclein-1 [85] 0.38[86] 0.09[87] 0.59[88] 0.88[89] 0.45[90] 1.61[91]
14 TERF1 Telomeric repeat-binding factor 1 [92] -1.83[93] -0.66[94] -0.28[95] 0.90[96] -0.46[97] 0.38[98]
15 TERF2 Telomeric repeat-binding factor 2 [99] -0.62[100] -0.59[101] 0.30[102] -0.41[103] -0.45[104] -0.03[105]
16 RAD50 DNA repair protein RAD50 [106] -0.78[107] 1.38[108] 0.66[109] 0.94[110] 0.98[111] 2.61[112]
17 CCNE1 G1/S-specific cyclin-E1 [113] 0.31[114] 0.44[115] -1.24[116] -0.73[117] -0.58[118] -4.22[119]
18 CCNA2 Cyclin-A2 [120] 1.28[121] 2.31[122] 1.78[123] 1.68[124] 2.62[125] -0.82[126]
19 RB1 Retinoblastoma-associated protein [127] 0.29[128] 0.81[129] 1.50[130] 1.95[131] 1.83[132] 1.88[133]
20 POT1 Protection of telomeres protein 1 [134] -0.92[135] 0.39[136] 0.76[137] 1.44[138] 0.75[139] 1.20[140]
21 ACD Adrenocortical dysplasia protein homolog [141] 0.77[142] 1.06[143] 0.97[144] 0.43[145] 0.71[146] -0.28[147]
22 CABIN1 Calcineurin-binding protein cabin-1 [148] 2.91[149] 2.33[150] 2.40[151] 2.23[152] 1.54[153] 3.08[154]
23 HMGA2 High mobility group protein HMGI-C [155] 3.55[156] 4.77[157] 4.36[158] 2.99[159] 1.51[160] -6.01[161]
24 EP400 E1A-binding protein p400 [162] 2.59[163] 2.34[164] 2.72[165] 3.06[166] 2.30[167] 3.21[168]
25 ATM Serine-protein kinase ATM [169] 2.10[170] 3.73[171] 3.58[172] 3.83[173] 2.86[174] 5.39[175]
26 CCNE2 G1/S-specific cyclin-E2 [176] -0.51[177] -0.08[178] -0.43[179] 2.71[180] 2.17[181] 0.05[182]
27 CCNA1 Cyclin-A1 [183] [184] -4.29[185] [186] -1.12[187] 5.84[188] [189]
28 H2AZ2 [190] [191] [192] [193] [194] [195] [196]
29 H2AC7 [197] [198] [199] [200] [201] [202] [203]
30 H2BC3 [204] [205] [206] [207] [208] [209] [210]
31 H2AC20 [211] [212] [213] [214] [215] [216] [217]
32 H4C13 [218] [219] [220] [221] [222] [223] [224]
33 H2BC9 [225] [226] [227] [228] [229] [230] [231]
34 H2BC7 [232] [233] [234] [235] [236] [237] [238]
35 H4-16 [239] [240] [241] [242] [243] [244] [245]
36 H4C9 [246] [247] [248] [249] [250] [251] [252]
37 H2BS1 [253] [254] [255] [256] [257] [258] [259]
38 H4C12 [260] [261] [262] [263] [264] [265] [266]
39 H4C3 [267] [268] [269] [270] [271] [272] [273]
40 H2BC6 [274] [275] [276] [277] [278] [279] [280]
41 H2BC10 [281] [282] [283] [284] [285] [286] [287]
42 H2AZ1 [288] [289] [290] [291] [292] [293] [294]
43 H2BU1 [295] [296] [297] [298] [299] [300] [301]
44 H1-2 [302] [303] [304] [305] [306] [307] [308]
45 H2AC6 [309] [310] [311] [312] [313] [314] [315]
46 H2BC15 [316] [317] [318] [319] [320] [321] [322]
47 H2AB1 [323] [324] [325] [326] [327] [328] [329]
48 H3-4 [330] [331] [332] [333] [334] [335] [336]
49 H4C4 [337] [338] [339] [340] [341] [342] [343]
50 H1-0 [344] [345] [346] [347] [348] [349] [350]
51 H1-1 [351] [352] [353] [354] [355] [356] [357]
52 H4C11 [358] [359] [360] [361] [362] [363] [364]
53 H2BC1 [365] [366] [367] [368] [369] [370] [371]
54 H4C8 [372] [373] [374] [375] [376] [377] [378]
55 H4C5 [379] [380] [381] [382] [383] [384] [385]
56 MRE11 Double-strand break repair protein MRE11 [386] [387] [388] [389] [390] [391] [392]
57 H2BC4 [393] [394] [395] [396] [397] [398] [399]
58 H4C6 [400] [401] [402] [403] [404] [405] [406]
59 H4C14 [407] [408] [409] [410] [411] [412] [413]
60 H2BC17 [414] [415] [416] [417] [418] [419] [420]
61 H2AC4 [421] [422] [423] [424] [425] [426] [427]
62 H2BC21 [428] [429] [430] [431] [432] [433] [434]
63 H2AJ [435] [436] [437] [438] [439] [440] [441]
64 H1-3 [442] [443] [444] [445] [446] [447] [448]
65 H2AX [449] [450] [451] [452] [453] [454] [455]
66 H2BC12 [456] [457] [458] [459] [460] [461] [462]
67 H4C2 [463] [464] [465] [466] [467] [468] [469]
68 H2BC13 [470] [471] [472] [473] [474] [475] [476]
69 H2BC11 [477] [478] [479] [480] [481] [482] [483]
70 H1-5 [484] [485] [486] [487] [488] [489] [490]
71 H2AC14 [491] [492] [493] [494] [495] [496] [497]
72 H2BC5 [498] [499] [500] [501] [502] [503] [504]
73 H2AC8 [505] [506] [507] [508] [509] [510] [511]
74 H1-4 [512] [513] [514] [515] [516] [517] [518]
75 H4C1 [519] [520] [521] [522] [523] [524] [525]
76 H4C15 [526] [527] [528] [529] [530] [531] [532]
77 H2BC8 [533] [534] [535] [536] [537] [538] [539]
78 H2BC14 [540] [541] [542] [543] [544] [545] [546]
[1]
ref_hepatocyte HMGA1
Mean 79
Standard deviation 95
Values 27 1.3e+02 2.3e+02 6.2 10
[2]
HepG2 HMGA1
Mean 291
Standard deviation 1.5e+02
Values 3.9e+02 1.9e+02
[3]
HepG2.C3A HMGA1
Mean 124
Standard deviation 23
Values 1.1e+02 1.4e+02
[4]
HuH.7 HMGA1
Mean 167
Standard deviation 39
Values 2e+02 1.2e+02 1.8e+02
[5]
SNU475 HMGA1
Mean 84.9
Standard deviation 63
Values 41 1.3e+02
[6]
THLE HMGA1
Mean 212
Standard deviation 88
Values 1.5e+02 2.7e+02
[7]
liver HMGA1
Mean 3.84
Standard deviation 3.2
Values 7.1 0.86 6 1.4
[8]
ref_hepatocyte CDKN1A
Mean 40.1
Standard deviation 28
Values 19 48 76 52 5.7
[9]
HepG2 CDKN1A
Mean 158
Standard deviation 49
Values 1.9e+02 1.2e+02
[10]
HepG2.C3A CDKN1A
Mean 53.9
Standard deviation 3.9
Values 51 57
[11]
HuH.7 CDKN1A
Mean 8
Standard deviation 1.9
Values 6.5 10 7.3
[12]
SNU475 CDKN1A
Mean 18.6
Standard deviation 7.8
Values 13 24
[13]
THLE CDKN1A
Mean 122
Standard deviation 11
Values 1.3e+02 1.1e+02
[14]
liver CDKN1A
Mean 16
Standard deviation 8.1
Values 16 6.2 26 16
[15]
ref_hepatocyte TERF2IP
Mean 20.1
Standard deviation 5.4
Values 22 25 25 16 13
[16]
HepG2 TERF2IP
Mean 29
Standard deviation 0.8
Values 30 28
[17]
HepG2.C3A TERF2IP
Mean 32.6
Standard deviation 7.5
Values 38 27
[18]
HuH.7 TERF2IP
Mean 31.3
Standard deviation 5
Values 27 30 37
[19]
SNU475 TERF2IP
Mean 19.6
Standard deviation 0.25
Values 19 20
[20]
THLE TERF2IP
Mean 29.2
Standard deviation 1
Values 28 30
[21]
liver TERF2IP
Mean 15.5
Standard deviation 7.4
Values 23 9.1 21 9.1
[22]
ref_hepatocyte CDKN1B
Mean 13.8
Standard deviation 6
Values 23 13 7.5 10 15
[23]
HepG2 CDKN1B
Mean 28.7
Standard deviation 3.4
Values 31 26
[24]
HepG2.C3A CDKN1B
Mean 34.7
Standard deviation 1.4
Values 34 36
[25]
HuH.7 CDKN1B
Mean 38.2
Standard deviation 3.7
Values 35 42 37
[26]
SNU475 CDKN1B
Mean 11.8
Standard deviation 2.9
Values 14 9.7
[27]
THLE CDKN1B
Mean 18.2
Standard deviation 3.4
Values 16 21
[28]
liver CDKN1B
Mean 10.5
Standard deviation 3.5
Values 9.9 14 5.8 12
[29]
ref_hepatocyte CDK2
Mean 12.1
Standard deviation 11
Values 19 28 3.3 5.7 4.6
[30]
HepG2 CDK2
Mean 20
Standard deviation 3.4
Values 18 22
[31]
HepG2.C3A CDK2
Mean 20
Standard deviation 9.1
Values 14 26
[32]
HuH.7 CDK2
Mean 24.9
Standard deviation 12
Values 30 11 33
[33]
SNU475 CDK2
Mean 21.8
Standard deviation 2.6
Values 20 24
[34]
THLE CDK2
Mean 36.9
Standard deviation 5.3
Values 33 41
[35]
liver CDK2
Mean 3.76
Standard deviation 1.3
Values 4.4 2.3 5.2 3.2
[36]
ref_hepatocyte TINF2
Mean 8.21
Standard deviation 1.3
Values 10 7.4 8.3 7.2 7.7
[37]
HepG2 TINF2
Mean 30.8
Standard deviation 1.5
Values 30 32
[38]
HepG2.C3A TINF2
Mean 10.8
Standard deviation 0.3
Values 11 11
[39]
HuH.7 TINF2
Mean 10.4
Standard deviation 1.3
Values 10 9 12
[40]
SNU475 TINF2
Mean 14.1
Standard deviation 0.013
Values 14 14
[41]
THLE TINF2
Mean 15.8
Standard deviation 1.4
Values 15 17
[42]
liver TINF2
Mean 10.2
Standard deviation 2.5
Values 12 7.3 12 8.9
[43]
ref_hepatocyte LMNB1
Mean 7.95
Standard deviation 9.7
Values 25 7.4 2.1 2.1 3.3
[44]
HepG2 LMNB1
Mean 34.6
Standard deviation 12
Values 26 43
[45]
HepG2.C3A LMNB1
Mean 31.6
Standard deviation 15
Values 21 42
[46]
HuH.7 LMNB1
Mean 31.5
Standard deviation 13
Values 36 16 42
[47]
SNU475 LMNB1
Mean 36.2
Standard deviation 1.2
Values 37 35
[48]
THLE LMNB1
Mean 31.8
Standard deviation 13
Values 22 41
[49]
liver LMNB1
Mean 2.45
Standard deviation 2.4
Values 0.54 5.6 0.69 3
[50]
ref_hepatocyte KAT5
Mean 6.92
Standard deviation 2.7
Values 6 6.4 12 6.3 4.4
[51]
HepG2 KAT5
Mean 8.9
Standard deviation 0.12
Values 9 8.8
[52]
HepG2.C3A KAT5
Mean 10.6
Standard deviation 0.63
Values 11 10
[53]
HuH.7 KAT5
Mean 4.96
Standard deviation 0.22
Values 4.9 4.8 5.2
[54]
SNU475 KAT5
Mean 7.11
Standard deviation 0.33
Values 6.9 7.3
[55]
THLE KAT5
Mean 7.53
Standard deviation 0.42
Values 7.2 7.8
[56]
liver KAT5
Mean 4.69
Standard deviation 1
Values 5.5 4.1 5.7 3.5
[57]
ref_hepatocyte NBN
Mean 5.99
Standard deviation 3.6
Values 7.6 11 3.9 2.7 4.3
[58]
HepG2 NBN
Mean 9.9
Standard deviation 6.3
Values 5.4 14
[59]
HepG2.C3A NBN
Mean 20
Standard deviation 9.1
Values 14 26
[60]
HuH.7 NBN
Mean 16.2
Standard deviation 4.2
Values 20 12 17
[61]
SNU475 NBN
Mean 31.2
Standard deviation 0.96
Values 30 32
[62]
THLE NBN
Mean 19
Standard deviation 0.88
Values 20 18
[63]
liver NBN
Mean 20.5
Standard deviation 4.2
Values 19 24 24 16
[64]
ref_hepatocyte HIRA
Mean 5.63
Standard deviation 2.9
Values 11 3.8 5.2 4.8 3.6
[65]
HepG2 HIRA
Mean 35.4
Standard deviation 0.09
Values 35 35
[66]
HepG2.C3A HIRA
Mean 42.4
Standard deviation 3.9
Values 45 40
[67]
HuH.7 HIRA
Mean 39.7
Standard deviation 12
Values 48 26 46
[68]
SNU475 HIRA
Mean 14.6
Standard deviation 0.36
Values 15 14
[69]
THLE HIRA
Mean 21.5
Standard deviation 4
Values 19 24
[70]
liver HIRA
Mean 13.5
Standard deviation 10
Values 6.3 22 3.5 22
[71]
ref_hepatocyte TP53
Mean 5.28
Standard deviation 0.94
Values 5.5 3.7 6.2 5.5 5.5
[72]
HepG2 TP53
Mean 36.3
Standard deviation 0.12
Values 36 36
[73]
HepG2.C3A TP53
Mean 23.9
Standard deviation 1.8
Values 23 25
[74]
HuH.7 TP53
Mean 38.7
Standard deviation 16
Values 50 20 46
[75]
SNU475 TP53
Mean 23.7
Standard deviation 6.7
Values 28 19
[76]
THLE TP53
Mean 21.1
Standard deviation 6.6
Values 16 26
[77]
liver TP53
Mean 7.29
Standard deviation 2.3
Values 9 5 9.5 5.6
[78]
ref_hepatocyte ASF1A
Mean 5.04
Standard deviation 3.1
Values 9.7 6.2 1.6 3.2 4.6
[79]
HepG2 ASF1A
Mean 19.9
Standard deviation 2.9
Values 18 22
[80]
HepG2.C3A ASF1A
Mean 28.2
Standard deviation 14
Values 18 38
[81]
HuH.7 ASF1A
Mean 12.1
Standard deviation 3.7
Values 13 8.1 15
[82]
SNU475 ASF1A
Mean 21.8
Standard deviation 1.3
Values 21 23
[83]
THLE ASF1A
Mean 18.3
Standard deviation 0.45
Values 19 18
[84]
liver ASF1A
Mean 7.34
Standard deviation 4
Values 7.2 6.1 13 3.3
[85]
ref_hepatocyte UBN1
Mean 4.78
Standard deviation 3.1
Values 9.4 6.2 4.2 2.4 1.6
[86]
HepG2 UBN1
Mean 26.1
Standard deviation 1.5
Values 25 27
[87]
HepG2.C3A UBN1
Mean 18.7
Standard deviation 0.62
Values 18 19
[88]
HuH.7 UBN1
Mean 23.3
Standard deviation 4.6
Values 28 22 19
[89]
SNU475 UBN1
Mean 20.2
Standard deviation 0.3
Values 20 20
[90]
THLE UBN1
Mean 22.9
Standard deviation 6.3
Values 19 27
[91]
liver UBN1
Mean 15.6
Standard deviation 3.9
Values 15 16 11 21
[92]
ref_hepatocyte TERF1
Mean 4.67
Standard deviation 2
Values 2.2 3.5 6.2 4.5 6.9
[93]
HepG2 TERF1
Mean 5.51
Standard deviation 1.4
Values 4.5 6.5
[94]
HepG2.C3A TERF1
Mean 10.9
Standard deviation 3
Values 8.8 13
[95]
HuH.7 TERF1
Mean 12.4
Standard deviation 1.1
Values 13 11 12
[96]
SNU475 TERF1
Mean 20.1
Standard deviation 0.86
Values 21 19
[97]
THLE TERF1
Mean 11.9
Standard deviation 0.88
Values 11 13
[98]
liver TERF1
Mean 6.49
Standard deviation 1.9
Values 8.7 6.1 6.9 4.2
[99]
ref_hepatocyte TERF2
Mean 4.13
Standard deviation 0.67
Values 4.9 4.3 4.6 3.7 3.2
[100]
HepG2 TERF2
Mean 11.3
Standard deviation 0.25
Values 11 11
[101]
HepG2.C3A TERF2
Mean 10.1
Standard deviation 0.26
Values 9.9 10
[102]
HuH.7 TERF2
Mean 16.5
Standard deviation 2.9
Values 17 13 19
[103]
SNU475 TERF2
Mean 7.14
Standard deviation 0.058
Values 7.1 7.2
[104]
THLE TERF2
Mean 10.6
Standard deviation 0.15
Values 11 11
[105]
liver TERF2
Mean 4.32
Standard deviation 1.4
Values 6.4 3.6 3.6 3.7
[106]
ref_hepatocyte RAD50
Mean 3.85
Standard deviation 2.1
Values 3.9 7.4 2.3 2.9 2.8
[107]
HepG2 RAD50
Mean 9.45
Standard deviation 2.3
Values 7.9 11
[108]
HepG2.C3A RAD50
Mean 36.9
Standard deviation 0.99
Values 38 36
[109]
HuH.7 RAD50
Mean 19.7
Standard deviation 4.1
Values 22 22 15
[110]
SNU475 RAD50
Mean 17
Standard deviation 2.2
Values 15 19
[111]
THLE RAD50
Mean 26.8
Standard deviation 8.4
Values 33 21
[112]
liver RAD50
Mean 25.2
Standard deviation 5.7
Values 32 26 25 18
[113]
ref_hepatocyte CCNE1
Mean 3.4
Standard deviation 4.5
Values 11 4.2 1.1 0.65 0.21
[114]
HepG2 CCNE1
Mean 17.7
Standard deviation 1.7
Values 17 19
[115]
HepG2.C3A CCNE1
Mean 17
Standard deviation 7.4
Values 12 22
[116]
HuH.7 CCNE1
Mean 4.65
Standard deviation 2.3
Values 5.5 2 6.5
[117]
SNU475 CCNE1
Mean 4.72
Standard deviation 1.8
Values 3.5 6
[118]
THLE CCNE1
Mean 8.01
Standard deviation 0.79
Values 7.4 8.6
[119]
liver CCNE1
Mean 0.195
Standard deviation 0.1
Values 0.19 0.26 0.28 0.053
[120]
ref_hepatocyte CCNA2
Mean 3.28
Standard deviation 3.7
Values 7 7.5 0.2 1.1 0.57
[121]
HepG2 CCNA2
Mean 33.4
Standard deviation 16
Values 22 44
[122]
HepG2.C3A CCNA2
Mean 60.1
Standard deviation 42
Values 30 90
[123]
HuH.7 CCNA2
Mean 36.5
Standard deviation 15
Values 47 20 43
[124]
SNU475 CCNA2
Mean 24.1
Standard deviation 0.4
Values 24 24
[125]
THLE CCNA2
Mean 71
Standard deviation 9.4
Values 64 78
[126]
liver CCNA2
Mean 1.99
Standard deviation 1.7
Values 0.85 3.4 3.5 0.21
[127]
ref_hepatocyte RB1
Mean 3.07
Standard deviation 1.4
Values 5 3.8 3 1.4 2.2
[128]
HepG2 RB1
Mean 15.8
Standard deviation 7.9
Values 10 21
[129]
HepG2.C3A RB1
Mean 19.9
Standard deviation 6.1
Values 16 24
[130]
HuH.7 RB1
Mean 28.2
Standard deviation 3.3
Values 32 25 28
[131]
SNU475 RB1
Mean 27.3
Standard deviation 0.91
Values 28 27
[132]
THLE RB1
Mean 38.3
Standard deviation 1.7
Values 37 40
[133]
liver RB1
Mean 12.1
Standard deviation 2.2
Values 12 14 13 9
[134]
ref_hepatocyte POT1
Mean 2.27
Standard deviation 0.82
Values 3.2 2.4 0.96 2.2 2.5
[135]
HepG2 POT1
Mean 5.04
Standard deviation 1.2
Values 4.2 5.9
[136]
HepG2.C3A POT1
Mean 10.9
Standard deviation 2
Values 9.5 12
[137]
HuH.7 POT1
Mean 12.4
Standard deviation 0.67
Values 12 13 12
[138]
SNU475 POT1
Mean 14.1
Standard deviation 0.62
Values 14 15
[139]
THLE POT1
Mean 13.4
Standard deviation 2.1
Values 15 12
[140]
liver POT1
Mean 5.58
Standard deviation 1.5
Values 4.5 7.1 6.7 4.1
[141]
ref_hepatocyte ACD
Mean 2.1
Standard deviation 0.79
Values 3 2.7 2.2 1.6 1
[142]
HepG2 ACD
Mean 15.1
Standard deviation 1.5
Values 16 14
[143]
HepG2.C3A ACD
Mean 16.2
Standard deviation 0.61
Values 16 17
[144]
HuH.7 ACD
Mean 13.3
Standard deviation 3.4
Values 15 9.4 15
[145]
SNU475 ACD
Mean 6.51
Standard deviation 0.88
Values 5.9 7.1
[146]
THLE ACD
Mean 12.1
Standard deviation 0.43
Values 12 12
[147]
liver ACD
Mean 1.85
Standard deviation 1.2
Values 3.2 0.64 2.5 1
[148]
ref_hepatocyte CABIN1
Mean 1.97
Standard deviation 1.5
Values 4.6 0.76 1.6 1.8 1.1
[149]
HepG2 CABIN1
Mean 62.1
Standard deviation 23
Values 46 78
[150]
HepG2.C3A CABIN1
Mean 36.5
Standard deviation 0.53
Values 37 36
[151]
HuH.7 CABIN1
Mean 33.6
Standard deviation 9.1
Values 44 28 29
[152]
SNU475 CABIN1
Mean 21.2
Standard deviation 3.2
Values 23 19
[153]
THLE CABIN1
Mean 20.2
Standard deviation 3.9
Values 17 23
[154]
liver CABIN1
Mean 17.8
Standard deviation 12
Values 6.7 30 8.2 26
[155]
ref_hepatocyte HMGA2
Mean 1.66
Standard deviation 3.3
Values 7.6 0.085 0.35 0.026 0.19
[156]
HepG2 HMGA2
Mean 81.5
Standard deviation 21
Values 66 97
[157]
HepG2.C3A HMGA2
Mean 167
Standard deviation 54
Values 1.3e+02 2.1e+02
[158]
HuH.7 HMGA2
Mean 110
Standard deviation 38
Values 1.5e+02 73 1.1e+02
[159]
SNU475 HMGA2
Mean 30.3
Standard deviation 9
Values 24 37
[160]
THLE HMGA2
Mean 16.6
Standard deviation 6.6
Values 12 21
[161]
liver HMGA2
Mean 0.0276
Standard deviation 0.031
Values 0 0.071 0.026 0.013
[162]
ref_hepatocyte EP400
Mean 1.51
Standard deviation 0.82
Values 2.3 1.3 2.5 0.82 0.71
[163]
HepG2 EP400
Mean 38.4
Standard deviation 2.9
Values 41 36
[164]
HepG2.C3A EP400
Mean 28.2
Standard deviation 5.6
Values 32 24
[165]
HuH.7 EP400
Mean 32.4
Standard deviation 10
Values 44 27 26
[166]
SNU475 EP400
Mean 29
Standard deviation 3.1
Values 31 27
[167]
THLE EP400
Mean 26.3
Standard deviation 6.9
Values 21 31
[168]
liver EP400
Mean 15
Standard deviation 6.2
Values 10 20 8.9 21
[169]
ref_hepatocyte ATM
Mean 0.969
Standard deviation 0.7
Values 2.1 0.69 0.27 0.7 1.1
[170]
HepG2 ATM
Mean 17.5
Standard deviation 8.3
Values 12 23
[171]
HepG2.C3A ATM
Mean 47.4
Standard deviation 4.5
Values 44 51
[172]
HuH.7 ATM
Mean 37.5
Standard deviation 9.1
Values 41 44 27
[173]
SNU475 ATM
Mean 31.7
Standard deviation 8.2
Values 38 26
[174]
THLE ATM
Mean 24.9
Standard deviation 4.4
Values 28 22
[175]
liver ATM
Mean 43.7
Standard deviation 31
Values 17 76 17 64
[176]
ref_hepatocyte CCNE2
Mean 0.86
Standard deviation 0.73
Values 1.2 2 0.44 0.36 0.28
[177]
HepG2 CCNE2
Mean 2.55
Standard deviation 1.9
Values 1.2 3.9
[178]
HepG2.C3A CCNE2
Mean 2.99
Standard deviation 2.8
Values 1 5
[179]
HuH.7 CCNE2
Mean 2.08
Standard deviation 1
Values 2.8 0.93 2.5
[180]
SNU475 CCNE2
Mean 13
Standard deviation 3.7
Values 10 16
[181]
THLE CCNE2
Mean 13.6
Standard deviation 1.4
Values 13 15
[182]
liver CCNE2
Mean 0.957
Standard deviation 0.34
Values 0.63 1 1.4 0.78
[183]
ref_hepatocyte CCNA1
Mean 0.0259
Standard deviation 0.058
Values 0.13 0 0 0 0
[184]
HepG2 CCNA1
Mean 0
Standard deviation 0
Values 0 0
[185]
HepG2.C3A CCNA1
Mean 0.00486
Standard deviation 0.0069
Values 0.0097 0
[186]
HuH.7 CCNA1
Mean 0
Standard deviation 0
Values 0 0 0
[187]
SNU475 CCNA1
Mean 0.0274
Standard deviation 0.026
Values 0.0093 0.046
[188]
THLE CCNA1
Mean 5.22
Standard deviation 2.3
Values 3.6 6.9
[189]
liver CCNA1
Mean 0
Standard deviation 0
Values 0 0 0 0
[190]
ref_hepatocyte H2AZ2
Missing
[191]
HepG2 H2AZ2
Missing
[192]
HepG2.C3A H2AZ2
Missing
[193]
HuH.7 H2AZ2
Missing
[194]
SNU475 H2AZ2
Missing
[195]
THLE H2AZ2
Missing
[196]
liver H2AZ2
Missing
[197]
ref_hepatocyte H2AC7
Missing
[198]
HepG2 H2AC7
Missing
[199]
HepG2.C3A H2AC7
Missing
[200]
HuH.7 H2AC7
Missing
[201]
SNU475 H2AC7
Missing
[202]
THLE H2AC7
Missing
[203]
liver H2AC7
Missing
[204]
ref_hepatocyte H2BC3
Missing
[205]
HepG2 H2BC3
Missing
[206]
HepG2.C3A H2BC3
Missing
[207]
HuH.7 H2BC3
Missing
[208]
SNU475 H2BC3
Missing
[209]
THLE H2BC3
Missing
[210]
liver H2BC3
Missing
[211]
ref_hepatocyte H2AC20
Missing
[212]
HepG2 H2AC20
Missing
[213]
HepG2.C3A H2AC20
Missing
[214]
HuH.7 H2AC20
Missing
[215]
SNU475 H2AC20
Missing
[216]
THLE H2AC20
Missing
[217]
liver H2AC20
Missing
[218]
ref_hepatocyte H4C13
Missing
[219]
HepG2 H4C13
Missing
[220]
HepG2.C3A H4C13
Missing
[221]
HuH.7 H4C13
Missing
[222]
SNU475 H4C13
Missing
[223]
THLE H4C13
Missing
[224]
liver H4C13
Missing
[225]
ref_hepatocyte H2BC9
Missing
[226]
HepG2 H2BC9
Missing
[227]
HepG2.C3A H2BC9
Missing
[228]
HuH.7 H2BC9
Missing
[229]
SNU475 H2BC9
Missing
[230]
THLE H2BC9
Missing
[231]
liver H2BC9
Missing
[232]
ref_hepatocyte H2BC7
Missing
[233]
HepG2 H2BC7
Missing
[234]
HepG2.C3A H2BC7
Missing
[235]
HuH.7 H2BC7
Missing
[236]
SNU475 H2BC7
Missing
[237]
THLE H2BC7
Missing
[238]
liver H2BC7
Missing
[239]
ref_hepatocyte H4-16
Missing
[240]
HepG2 H4-16
Missing
[241]
HepG2.C3A H4-16
Missing
[242]
HuH.7 H4-16
Missing
[243]
SNU475 H4-16
Missing
[244]
THLE H4-16
Missing
[245]
liver H4-16
Missing
[246]
ref_hepatocyte H4C9
Missing
[247]
HepG2 H4C9
Missing
[248]
HepG2.C3A H4C9
Missing
[249]
HuH.7 H4C9
Missing
[250]
SNU475 H4C9
Missing
[251]
THLE H4C9
Missing
[252]
liver H4C9
Missing
[253]
ref_hepatocyte H2BS1
Missing
[254]
HepG2 H2BS1
Missing
[255]
HepG2.C3A H2BS1
Missing
[256]
HuH.7 H2BS1
Missing
[257]
SNU475 H2BS1
Missing
[258]
THLE H2BS1
Missing
[259]
liver H2BS1
Missing
[260]
ref_hepatocyte H4C12
Missing
[261]
HepG2 H4C12
Missing
[262]
HepG2.C3A H4C12
Missing
[263]
HuH.7 H4C12
Missing
[264]
SNU475 H4C12
Missing
[265]
THLE H4C12
Missing
[266]
liver H4C12
Missing
[267]
ref_hepatocyte H4C3
Missing
[268]
HepG2 H4C3
Missing
[269]
HepG2.C3A H4C3
Missing
[270]
HuH.7 H4C3
Missing
[271]
SNU475 H4C3
Missing
[272]
THLE H4C3
Missing
[273]
liver H4C3
Missing
[274]
ref_hepatocyte H2BC6
Missing
[275]
HepG2 H2BC6
Missing
[276]
HepG2.C3A H2BC6
Missing
[277]
HuH.7 H2BC6
Missing
[278]
SNU475 H2BC6
Missing
[279]
THLE H2BC6
Missing
[280]
liver H2BC6
Missing
[281]
ref_hepatocyte H2BC10
Missing
[282]
HepG2 H2BC10
Missing
[283]
HepG2.C3A H2BC10
Missing
[284]
HuH.7 H2BC10
Missing
[285]
SNU475 H2BC10
Missing
[286]
THLE H2BC10
Missing
[287]
liver H2BC10
Missing
[288]
ref_hepatocyte H2AZ1
Missing
[289]
HepG2 H2AZ1
Missing
[290]
HepG2.C3A H2AZ1
Missing
[291]
HuH.7 H2AZ1
Missing
[292]
SNU475 H2AZ1
Missing
[293]
THLE H2AZ1
Missing
[294]
liver H2AZ1
Missing
[295]
ref_hepatocyte H2BU1
Missing
[296]
HepG2 H2BU1
Missing
[297]
HepG2.C3A H2BU1
Missing
[298]
HuH.7 H2BU1
Missing
[299]
SNU475 H2BU1
Missing
[300]
THLE H2BU1
Missing
[301]
liver H2BU1
Missing
[302]
ref_hepatocyte H1-2
Missing
[303]
HepG2 H1-2
Missing
[304]
HepG2.C3A H1-2
Missing
[305]
HuH.7 H1-2
Missing
[306]
SNU475 H1-2
Missing
[307]
THLE H1-2
Missing
[308]
liver H1-2
Missing
[309]
ref_hepatocyte H2AC6
Missing
[310]
HepG2 H2AC6
Missing
[311]
HepG2.C3A H2AC6
Missing
[312]
HuH.7 H2AC6
Missing
[313]
SNU475 H2AC6
Missing
[314]
THLE H2AC6
Missing
[315]
liver H2AC6
Missing
[316]
ref_hepatocyte H2BC15
Missing
[317]
HepG2 H2BC15
Missing
[318]
HepG2.C3A H2BC15
Missing
[319]
HuH.7 H2BC15
Missing
[320]
SNU475 H2BC15
Missing
[321]
THLE H2BC15
Missing
[322]
liver H2BC15
Missing
[323]
ref_hepatocyte H2AB1
Missing
[324]
HepG2 H2AB1
Missing
[325]
HepG2.C3A H2AB1
Missing
[326]
HuH.7 H2AB1
Missing
[327]
SNU475 H2AB1
Missing
[328]
THLE H2AB1
Missing
[329]
liver H2AB1
Missing
[330]
ref_hepatocyte H3-4
Missing
[331]
HepG2 H3-4
Missing
[332]
HepG2.C3A H3-4
Missing
[333]
HuH.7 H3-4
Missing
[334]
SNU475 H3-4
Missing
[335]
THLE H3-4
Missing
[336]
liver H3-4
Missing
[337]
ref_hepatocyte H4C4
Missing
[338]
HepG2 H4C4
Missing
[339]
HepG2.C3A H4C4
Missing
[340]
HuH.7 H4C4
Missing
[341]
SNU475 H4C4
Missing
[342]
THLE H4C4
Missing
[343]
liver H4C4
Missing
[344]
ref_hepatocyte H1-0
Missing
[345]
HepG2 H1-0
Missing
[346]
HepG2.C3A H1-0
Missing
[347]
HuH.7 H1-0
Missing
[348]
SNU475 H1-0
Missing
[349]
THLE H1-0
Missing
[350]
liver H1-0
Missing
[351]
ref_hepatocyte H1-1
Missing
[352]
HepG2 H1-1
Missing
[353]
HepG2.C3A H1-1
Missing
[354]
HuH.7 H1-1
Missing
[355]
SNU475 H1-1
Missing
[356]
THLE H1-1
Missing
[357]
liver H1-1
Missing
[358]
ref_hepatocyte H4C11
Missing
[359]
HepG2 H4C11
Missing
[360]
HepG2.C3A H4C11
Missing
[361]
HuH.7 H4C11
Missing
[362]
SNU475 H4C11
Missing
[363]
THLE H4C11
Missing
[364]
liver H4C11
Missing
[365]
ref_hepatocyte H2BC1
Missing
[366]
HepG2 H2BC1
Missing
[367]
HepG2.C3A H2BC1
Missing
[368]
HuH.7 H2BC1
Missing
[369]
SNU475 H2BC1
Missing
[370]
THLE H2BC1
Missing
[371]
liver H2BC1
Missing
[372]
ref_hepatocyte H4C8
Missing
[373]
HepG2 H4C8
Missing
[374]
HepG2.C3A H4C8
Missing
[375]
HuH.7 H4C8
Missing
[376]
SNU475 H4C8
Missing
[377]
THLE H4C8
Missing
[378]
liver H4C8
Missing
[379]
ref_hepatocyte H4C5
Missing
[380]
HepG2 H4C5
Missing
[381]
HepG2.C3A H4C5
Missing
[382]
HuH.7 H4C5
Missing
[383]
SNU475 H4C5
Missing
[384]
THLE H4C5
Missing
[385]
liver H4C5
Missing
[386]
ref_hepatocyte MRE11
Missing
[387]
HepG2 MRE11
Missing
[388]
HepG2.C3A MRE11
Missing
[389]
HuH.7 MRE11
Missing
[390]
SNU475 MRE11
Missing
[391]
THLE MRE11
Missing
[392]
liver MRE11
Missing
[393]
ref_hepatocyte H2BC4
Missing
[394]
HepG2 H2BC4
Missing
[395]
HepG2.C3A H2BC4
Missing
[396]
HuH.7 H2BC4
Missing
[397]
SNU475 H2BC4
Missing
[398]
THLE H2BC4
Missing
[399]
liver H2BC4
Missing
[400]
ref_hepatocyte H4C6
Missing
[401]
HepG2 H4C6
Missing
[402]
HepG2.C3A H4C6
Missing
[403]
HuH.7 H4C6
Missing
[404]
SNU475 H4C6
Missing
[405]
THLE H4C6
Missing
[406]
liver H4C6
Missing
[407]
ref_hepatocyte H4C14
Missing
[408]
HepG2 H4C14
Missing
[409]
HepG2.C3A H4C14
Missing
[410]
HuH.7 H4C14
Missing
[411]
SNU475 H4C14
Missing
[412]
THLE H4C14
Missing
[413]
liver H4C14
Missing
[414]
ref_hepatocyte H2BC17
Missing
[415]
HepG2 H2BC17
Missing
[416]
HepG2.C3A H2BC17
Missing
[417]
HuH.7 H2BC17
Missing
[418]
SNU475 H2BC17
Missing
[419]
THLE H2BC17
Missing
[420]
liver H2BC17
Missing
[421]
ref_hepatocyte H2AC4
Missing
[422]
HepG2 H2AC4
Missing
[423]
HepG2.C3A H2AC4
Missing
[424]
HuH.7 H2AC4
Missing
[425]
SNU475 H2AC4
Missing
[426]
THLE H2AC4
Missing
[427]
liver H2AC4
Missing
[428]
ref_hepatocyte H2BC21
Missing
[429]
HepG2 H2BC21
Missing
[430]
HepG2.C3A H2BC21
Missing
[431]
HuH.7 H2BC21
Missing
[432]
SNU475 H2BC21
Missing
[433]
THLE H2BC21
Missing
[434]
liver H2BC21
Missing
[435]
ref_hepatocyte H2AJ
Missing
[436]
HepG2 H2AJ
Missing
[437]
HepG2.C3A H2AJ
Missing
[438]
HuH.7 H2AJ
Missing
[439]
SNU475 H2AJ
Missing
[440]
THLE H2AJ
Missing
[441]
liver H2AJ
Missing
[442]
ref_hepatocyte H1-3
Missing
[443]
HepG2 H1-3
Missing
[444]
HepG2.C3A H1-3
Missing
[445]
HuH.7 H1-3
Missing
[446]
SNU475 H1-3
Missing
[447]
THLE H1-3
Missing
[448]
liver H1-3
Missing
[449]
ref_hepatocyte H2AX
Missing
[450]
HepG2 H2AX
Missing
[451]
HepG2.C3A H2AX
Missing
[452]
HuH.7 H2AX
Missing
[453]
SNU475 H2AX
Missing
[454]
THLE H2AX
Missing
[455]
liver H2AX
Missing
[456]
ref_hepatocyte H2BC12
Missing
[457]
HepG2 H2BC12
Missing
[458]
HepG2.C3A H2BC12
Missing
[459]
HuH.7 H2BC12
Missing
[460]
SNU475 H2BC12
Missing
[461]
THLE H2BC12
Missing
[462]
liver H2BC12
Missing
[463]
ref_hepatocyte H4C2
Missing
[464]
HepG2 H4C2
Missing
[465]
HepG2.C3A H4C2
Missing
[466]
HuH.7 H4C2
Missing
[467]
SNU475 H4C2
Missing
[468]
THLE H4C2
Missing
[469]
liver H4C2
Missing
[470]
ref_hepatocyte H2BC13
Missing
[471]
HepG2 H2BC13
Missing
[472]
HepG2.C3A H2BC13
Missing
[473]
HuH.7 H2BC13
Missing
[474]
SNU475 H2BC13
Missing
[475]
THLE H2BC13
Missing
[476]
liver H2BC13
Missing
[477]
ref_hepatocyte H2BC11
Missing
[478]
HepG2 H2BC11
Missing
[479]
HepG2.C3A H2BC11
Missing
[480]
HuH.7 H2BC11
Missing
[481]
SNU475 H2BC11
Missing
[482]
THLE H2BC11
Missing
[483]
liver H2BC11
Missing
[484]
ref_hepatocyte H1-5
Missing
[485]
HepG2 H1-5
Missing
[486]
HepG2.C3A H1-5
Missing
[487]
HuH.7 H1-5
Missing
[488]
SNU475 H1-5
Missing
[489]
THLE H1-5
Missing
[490]
liver H1-5
Missing
[491]
ref_hepatocyte H2AC14
Missing
[492]
HepG2 H2AC14
Missing
[493]
HepG2.C3A H2AC14
Missing
[494]
HuH.7 H2AC14
Missing
[495]
SNU475 H2AC14
Missing
[496]
THLE H2AC14
Missing
[497]
liver H2AC14
Missing
[498]
ref_hepatocyte H2BC5
Missing
[499]
HepG2 H2BC5
Missing
[500]
HepG2.C3A H2BC5
Missing
[501]
HuH.7 H2BC5
Missing
[502]
SNU475 H2BC5
Missing
[503]
THLE H2BC5
Missing
[504]
liver H2BC5
Missing
[505]
ref_hepatocyte H2AC8
Missing
[506]
HepG2 H2AC8
Missing
[507]
HepG2.C3A H2AC8
Missing
[508]
HuH.7 H2AC8
Missing
[509]
SNU475 H2AC8
Missing
[510]
THLE H2AC8
Missing
[511]
liver H2AC8
Missing
[512]
ref_hepatocyte H1-4
Missing
[513]
HepG2 H1-4
Missing
[514]
HepG2.C3A H1-4
Missing
[515]
HuH.7 H1-4
Missing
[516]
SNU475 H1-4
Missing
[517]
THLE H1-4
Missing
[518]
liver H1-4
Missing
[519]
ref_hepatocyte H4C1
Missing
[520]
HepG2 H4C1
Missing
[521]
HepG2.C3A H4C1
Missing
[522]
HuH.7 H4C1
Missing
[523]
SNU475 H4C1
Missing
[524]
THLE H4C1
Missing
[525]
liver H4C1
Missing
[526]
ref_hepatocyte H4C15
Missing
[527]
HepG2 H4C15
Missing
[528]
HepG2.C3A H4C15
Missing
[529]
HuH.7 H4C15
Missing
[530]
SNU475 H4C15
Missing
[531]
THLE H4C15
Missing
[532]
liver H4C15
Missing
[533]
ref_hepatocyte H2BC8
Missing
[534]
HepG2 H2BC8
Missing
[535]
HepG2.C3A H2BC8
Missing
[536]
HuH.7 H2BC8
Missing
[537]
SNU475 H2BC8
Missing
[538]
THLE H2BC8
Missing
[539]
liver H2BC8
Missing
[540]
ref_hepatocyte H2BC14
Missing
[541]
HepG2 H2BC14
Missing
[542]
HepG2.C3A H2BC14
Missing
[543]
HuH.7 H2BC14
Missing
[544]
SNU475 H2BC14
Missing
[545]
THLE H2BC14
Missing
[546]
liver H2BC14
Missing