REACTOME_DERMATAN_SULFATE_BIOSYNTHESIS Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 DSE Dermatan-sulfate epimerase [1] -3.38[2] -0.60[3] -1.63[4] 0.34[5] -0.81[6] -1.83[7]
2 CHST14 Carbohydrate sulfotransferase 14 [8] -0.09[9] 0.50[10] -1.03[11] -0.67[12] -2.58[13] -4.23[14]
3 DCN Decorin [15] -8.24[16] -8.35[17] -5.87[18] -0.34[19] 1.70[20] 1.78[21]
4 BGN Biglycan [22] 0.06[23] -3.55[24] -6.21[25] -0.10[26] -4.75[27] 1.43[28]
5 VCAN Versican core protein [29] 2.84[30] -0.69[31] 3.02[32] -0.39[33] 1.78[34] -0.09[35]
6 DSEL Dermatan-sulfate epimerase-like protein [36] -2.73[37] -1.09[38] -0.35[39] -2.83[40] 0.04[41] 1.13[42]
7 UST Uronyl 2-sulfotransferase [43] -3.18[44] -1.29[45] -3.23[46] -1.01[47] 0.52[48] -2.31[49]
8 CSPG5 Chondroitin sulfate proteoglycan 5 [50] -3.12[51] -4.22[52] 1.25[53] -0.72[54] -4.96[55] -6.14[56]
9 NCAN Neurocan core protein [57] -0.20[58] -1.36[59] 0.56[60] -5.44[61] -4.70[62] -4.75[63]
10 CSPG4 Chondroitin sulfate proteoglycan 4 [64] 1.64[65] 2.27[66] 3.67[67] 5.28[68] 3.82[69] 1.88[70]
11 BCAN Brevican core protein [71] 6.30[72] 8.12[73] 5.94[74] 5.48[75] 1.30[76] -1.21[77]
[1]
ref_hepatocyte DSE
Mean 1.9
Standard deviation 1.9
Values 0.059 2.9 4.7 0.63 1.2
[2]
HepG2 DSE
Mean 1.51
Standard deviation 0.26
Values 1.3 1.7
[3]
HepG2.C3A DSE
Mean 2.99
Standard deviation 0.56
Values 2.6 3.4
[4]
HuH.7 DSE
Mean 1.87
Standard deviation 0.89
Values 1.4 2.9 1.3
[5]
SNU475 DSE
Mean 16.3
Standard deviation 0.0016
Values 16 16
[6]
THLE DSE
Mean 35.8
Standard deviation 4.5
Values 33 39
[7]
liver DSE
Mean 11.5
Standard deviation 5.3
Values 7.7 14 6.3 17
[8]
ref_hepatocyte CHST14
Mean 1.61
Standard deviation 1.3
Values 0.48 0.27 1.7 2.2 3.4
[9]
HepG2 CHST14
Mean 12.5
Standard deviation 0.33
Values 12 13
[10]
HepG2.C3A CHST14
Mean 5.41
Standard deviation 0.83
Values 4.8 6
[11]
HuH.7 CHST14
Mean 2.38
Standard deviation 1
Values 2.6 1.3 3.3
[12]
SNU475 CHST14
Mean 6.83
Standard deviation 0.94
Values 7.5 6.2
[13]
THLE CHST14
Mean 8.88
Standard deviation 2.1
Values 7.4 10
[14]
liver CHST14
Mean 1.84
Standard deviation 0.36
Values 2.3 1.4 1.8 1.8
[15]
ref_hepatocyte DCN
Mean 0.734
Standard deviation 1.2
Values 0 0 0.17 0.72 2.8
[16]
HepG2 DCN
Mean 0.02
Standard deviation 0.0041
Values 0.023 0.017
[17]
HepG2.C3A DCN
Mean 0.00536
Standard deviation 0.0076
Values 0 0.011
[18]
HuH.7 DCN
Mean 0.038
Standard deviation 0.019
Values 0.057 0.019 0.037
[19]
SNU475 DCN
Mean 3.92
Standard deviation 0.29
Values 3.7 4.1
[20]
THLE DCN
Mean 78.6
Standard deviation 48
Values 1.1e+02 44
[21]
liver DCN
Mean 54.1
Standard deviation 15
Values 60 51 70 35
[22]
ref_hepatocyte BGN
Mean 0.625
Standard deviation 0.62
Values 0.052 0 0.61 1.4 1
[23]
HepG2 BGN
Mean 5.39
Standard deviation 1.6
Values 6.5 4.3
[24]
HepG2.C3A BGN
Mean 0.127
Standard deviation 0.013
Values 0.14 0.12
[25]
HuH.7 BGN
Mean 0.0256
Standard deviation 0.029
Values 0.057 0.019 0
[26]
SNU475 BGN
Mean 3.94
Standard deviation 1.9
Values 2.6 5.3
[27]
THLE BGN
Mean 0.764
Standard deviation 0.37
Values 1 0.51
[28]
liver BGN
Mean 36.2
Standard deviation 29
Values 65 9.5 57 13
[29]
ref_hepatocyte VCAN
Mean 0.409
Standard deviation 0.32
Values 0.014 0.17 0.6 0.47 0.8
[30]
HepG2 VCAN
Mean 24.2
Standard deviation 5.2
Values 21 28
[31]
HepG2.C3A VCAN
Mean 0.601
Standard deviation 0.27
Values 0.41 0.79
[32]
HuH.7 VCAN
Mean 10
Standard deviation 9.3
Values 6.1 21 3.4
[33]
SNU475 VCAN
Mean 2.11
Standard deviation 1.7
Values 0.9 3.3
[34]
THLE VCAN
Mean 46.4
Standard deviation 11
Values 39 54
[35]
liver VCAN
Mean 8.26
Standard deviation 6.7
Values 4.5 8.5 2.4 18
[36]
ref_hepatocyte DSEL
Mean 0.282
Standard deviation 0.21
Values 0.038 0.53 0.14 0.25 0.45
[37]
HepG2 DSEL
Mean 0.351
Standard deviation 0.023
Values 0.37 0.33
[38]
HepG2.C3A DSEL
Mean 0.315
Standard deviation 0.1
Values 0.24 0.39
[39]
HuH.7 DSEL
Mean 0.669
Standard deviation 0.24
Values 0.64 0.92 0.45
[40]
SNU475 DSEL
Mean 0.267
Standard deviation 0.024
Values 0.25 0.28
[41]
THLE DSEL
Mean 9.55
Standard deviation 0.13
Values 9.6 9.5
[42]
liver DSEL
Mean 13.2
Standard deviation 6
Values 9.9 22 10 10
[43]
ref_hepatocyte UST
Mean 0.176
Standard deviation 0.17
Values 0.4 0.078 0.11 0 0.29
[44]
HepG2 UST
Mean 0.16
Standard deviation 0.11
Values 0.08 0.24
[45]
HepG2.C3A UST
Mean 0.171
Standard deviation 0.06
Values 0.21 0.13
[46]
HuH.7 UST
Mean 0.0567
Standard deviation 0.0094
Values 0.066 0.058 0.047
[47]
SNU475 UST
Mean 0.589
Standard deviation 0.078
Values 0.53 0.64
[48]
THLE UST
Mean 8.31
Standard deviation 0.13
Values 8.2 8.4
[49]
liver UST
Mean 0.759
Standard deviation 0.53
Values 0.38 1.4 0.26 1
[50]
ref_hepatocyte CSPG5
Mean 0.152
Standard deviation 0.19
Values 0 0.34 0 0.39 0.033
[51]
HepG2 CSPG5
Mean 0.145
Standard deviation 0.022
Values 0.16 0.13
[52]
HepG2.C3A CSPG5
Mean 0.0194
Standard deviation 0.027
Values 0.039 0
[53]
HuH.7 CSPG5
Mean 1.09
Standard deviation 0.56
Values 1.3 0.46 1.5
[54]
SNU475 CSPG5
Mean 0.62
Standard deviation 0.32
Values 0.39 0.85
[55]
THLE CSPG5
Mean 0.16
Standard deviation 0.016
Values 0.17 0.15
[56]
liver CSPG5
Mean 0.0462
Standard deviation 0.032
Values 0.024 0.043 0.026 0.093
[57]
ref_hepatocyte NCAN
Mean 0.0163
Standard deviation 0.036
Values 0 0 0.082 0 0
[58]
HepG2 NCAN
Mean 0.117
Standard deviation 0.12
Values 0.2 0.034
[59]
HepG2.C3A NCAN
Mean 0.0151
Standard deviation 0.0062
Values 0.019 0.011
[60]
HuH.7 NCAN
Mean 0.0731
Standard deviation 0.043
Values 0.041 0.12 0.056
[61]
SNU475 NCAN
Mean 0.00253
Standard deviation 0.0036
Values 0 0.0051
[62]
THLE NCAN
Mean 0.0207
Standard deviation 0.029
Values 0.041 0
[63]
liver NCAN
Mean 0.013
Standard deviation 0.015
Values 0.024 0.029 0 0
[64]
ref_hepatocyte CSPG4
Mean 0.0131
Standard deviation 0.018
Values 0.014 0 0.043 0 0.0081
[65]
HepG2 CSPG4
Mean 0.338
Standard deviation 0.09
Values 0.4 0.27
[66]
HepG2.C3A CSPG4
Mean 0.151
Standard deviation 0.062
Values 0.19 0.11
[67]
HuH.7 CSPG4
Mean 0.505
Standard deviation 0.16
Values 0.57 0.62 0.33
[68]
SNU475 CSPG4
Mean 3.45
Standard deviation 0.17
Values 3.6 3.3
[69]
THLE CSPG4
Mean 6.12
Standard deviation 2.4
Values 4.4 7.8
[70]
liver CSPG4
Mean 1.04
Standard deviation 1.2
Values 0.16 1.3 0.1 2.5
[71]
ref_hepatocyte BCAN
Mean 0.0065
Standard deviation 0.015
Values 0 0 0 0 0.033
[72]
HepG2 BCAN
Mean 4.23
Standard deviation 3.5
Values 6.7 1.8
[73]
HepG2.C3A BCAN
Mean 4.29
Standard deviation 0.91
Values 4.9 3.6
[74]
HuH.7 BCAN
Mean 1.21
Standard deviation 0.35
Values 1.3 1.5 0.83
[75]
SNU475 BCAN
Mean 1.96
Standard deviation 0.26
Values 2.1 1.8
[76]
THLE BCAN
Mean 0.527
Standard deviation 0.083
Values 0.59 0.47
[77]
liver BCAN
Mean 0.0604
Standard deviation 0.033
Values 0.071 0.029 0.1 0.04