REACTOME_DEFECTIVE_CHSY1_CAUSES_TPBS Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 CHSY1 Chondroitin sulfate synthase 1 [1] -0.11[2] 0.75[3] -0.63[4] 0.37[5] -1.36[6] -3.33[7]
2 DCN Decorin [8] -9.26[9] -9.42[10] -6.69[11] -0.94[12] 1.16[13] 1.23[14]
3 BGN Biglycan [15] -0.96[16] -4.62[17] -7.03[18] -0.70[19] -5.29[20] 0.87[21]
4 VCAN Versican core protein [22] 1.82[23] -1.77[24] 2.20[25] -0.99[26] 1.25[27] -0.64[28]
5 CSPG5 Chondroitin sulfate proteoglycan 5 [29] -4.14[30] -5.29[31] 0.43[32] -1.33[33] -5.50[34] -6.70[35]
6 NCAN Neurocan core protein [36] -1.22[37] -2.44[38] -0.25[39] -6.04[40] -5.23[41] -5.30[42]
7 CSPG4 Chondroitin sulfate proteoglycan 4 [43] 0.62[44] 1.20[45] 2.85[46] 4.68[47] 3.28[48] 1.32[49]
8 BCAN Brevican core protein [50] 5.28[51] 7.04[52] 5.12[53] 4.87[54] 0.76[55] -1.76[56]
[1]
ref_hepatocyte CHSY1
Mean 1.34
Standard deviation 0.68
Values 2.5 1.2 0.96 1.2 0.8
[2]
HepG2 CHSY1
Mean 20.7
Standard deviation 0.42
Values 20 21
[3]
HepG2.C3A CHSY1
Mean 11.3
Standard deviation 0.17
Values 11 11
[4]
HuH.7 CHSY1
Mean 4.62
Standard deviation 0.53
Values 4.8 4 5.1
[5]
SNU475 CHSY1
Mean 17.8
Standard deviation 2.3
Values 16 19
[6]
THLE CHSY1
Mean 24.8
Standard deviation 1.7
Values 24 26
[7]
liver CHSY1
Mean 4.21
Standard deviation 2.2
Values 2.4 6.1 2.3 6.1
[8]
ref_hepatocyte DCN
Mean 0.734
Standard deviation 1.2
Values 0 0 0.17 0.72 2.8
[9]
HepG2 DCN
Mean 0.02
Standard deviation 0.0041
Values 0.023 0.017
[10]
HepG2.C3A DCN
Mean 0.00536
Standard deviation 0.0076
Values 0 0.011
[11]
HuH.7 DCN
Mean 0.038
Standard deviation 0.019
Values 0.057 0.019 0.037
[12]
SNU475 DCN
Mean 3.92
Standard deviation 0.29
Values 3.7 4.1
[13]
THLE DCN
Mean 78.6
Standard deviation 48
Values 1.1e+02 44
[14]
liver DCN
Mean 54.1
Standard deviation 15
Values 60 51 70 35
[15]
ref_hepatocyte BGN
Mean 0.625
Standard deviation 0.62
Values 0.052 0 0.61 1.4 1
[16]
HepG2 BGN
Mean 5.39
Standard deviation 1.6
Values 6.5 4.3
[17]
HepG2.C3A BGN
Mean 0.127
Standard deviation 0.013
Values 0.14 0.12
[18]
HuH.7 BGN
Mean 0.0256
Standard deviation 0.029
Values 0.057 0.019 0
[19]
SNU475 BGN
Mean 3.94
Standard deviation 1.9
Values 2.6 5.3
[20]
THLE BGN
Mean 0.764
Standard deviation 0.37
Values 1 0.51
[21]
liver BGN
Mean 36.2
Standard deviation 29
Values 65 9.5 57 13
[22]
ref_hepatocyte VCAN
Mean 0.409
Standard deviation 0.32
Values 0.014 0.17 0.6 0.47 0.8
[23]
HepG2 VCAN
Mean 24.2
Standard deviation 5.2
Values 21 28
[24]
HepG2.C3A VCAN
Mean 0.601
Standard deviation 0.27
Values 0.41 0.79
[25]
HuH.7 VCAN
Mean 10
Standard deviation 9.3
Values 6.1 21 3.4
[26]
SNU475 VCAN
Mean 2.11
Standard deviation 1.7
Values 0.9 3.3
[27]
THLE VCAN
Mean 46.4
Standard deviation 11
Values 39 54
[28]
liver VCAN
Mean 8.26
Standard deviation 6.7
Values 4.5 8.5 2.4 18
[29]
ref_hepatocyte CSPG5
Mean 0.152
Standard deviation 0.19
Values 0 0.34 0 0.39 0.033
[30]
HepG2 CSPG5
Mean 0.145
Standard deviation 0.022
Values 0.16 0.13
[31]
HepG2.C3A CSPG5
Mean 0.0194
Standard deviation 0.027
Values 0.039 0
[32]
HuH.7 CSPG5
Mean 1.09
Standard deviation 0.56
Values 1.3 0.46 1.5
[33]
SNU475 CSPG5
Mean 0.62
Standard deviation 0.32
Values 0.39 0.85
[34]
THLE CSPG5
Mean 0.16
Standard deviation 0.016
Values 0.17 0.15
[35]
liver CSPG5
Mean 0.0462
Standard deviation 0.032
Values 0.024 0.043 0.026 0.093
[36]
ref_hepatocyte NCAN
Mean 0.0163
Standard deviation 0.036
Values 0 0 0.082 0 0
[37]
HepG2 NCAN
Mean 0.117
Standard deviation 0.12
Values 0.2 0.034
[38]
HepG2.C3A NCAN
Mean 0.0151
Standard deviation 0.0062
Values 0.019 0.011
[39]
HuH.7 NCAN
Mean 0.0731
Standard deviation 0.043
Values 0.041 0.12 0.056
[40]
SNU475 NCAN
Mean 0.00253
Standard deviation 0.0036
Values 0 0.0051
[41]
THLE NCAN
Mean 0.0207
Standard deviation 0.029
Values 0.041 0
[42]
liver NCAN
Mean 0.013
Standard deviation 0.015
Values 0.024 0.029 0 0
[43]
ref_hepatocyte CSPG4
Mean 0.0131
Standard deviation 0.018
Values 0.014 0 0.043 0 0.0081
[44]
HepG2 CSPG4
Mean 0.338
Standard deviation 0.09
Values 0.4 0.27
[45]
HepG2.C3A CSPG4
Mean 0.151
Standard deviation 0.062
Values 0.19 0.11
[46]
HuH.7 CSPG4
Mean 0.505
Standard deviation 0.16
Values 0.57 0.62 0.33
[47]
SNU475 CSPG4
Mean 3.45
Standard deviation 0.17
Values 3.6 3.3
[48]
THLE CSPG4
Mean 6.12
Standard deviation 2.4
Values 4.4 7.8
[49]
liver CSPG4
Mean 1.04
Standard deviation 1.2
Values 0.16 1.3 0.1 2.5
[50]
ref_hepatocyte BCAN
Mean 0.0065
Standard deviation 0.015
Values 0 0 0 0 0.033
[51]
HepG2 BCAN
Mean 4.23
Standard deviation 3.5
Values 6.7 1.8
[52]
HepG2.C3A BCAN
Mean 4.29
Standard deviation 0.91
Values 4.9 3.6
[53]
HuH.7 BCAN
Mean 1.21
Standard deviation 0.35
Values 1.3 1.5 0.83
[54]
SNU475 BCAN
Mean 1.96
Standard deviation 0.26
Values 2.1 1.8
[55]
THLE BCAN
Mean 0.527
Standard deviation 0.083
Values 0.59 0.47
[56]
liver BCAN
Mean 0.0604
Standard deviation 0.033
Values 0.071 0.029 0.1 0.04