REACTOME_CYTOSOLIC_SENSORS_OF_PATHOGEN_ASSOCIATED_DNA |
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Order |
Gene |
Description |
ref_hepatocyte |
HepG2 |
HepG2.C3A |
HuH.7 |
SNU475 |
THLE |
liver |
1 |
UBB |
Polyubiquitin-B |
[1] |
-1.19[2] |
-1.30[3] |
-1.41[4] |
-1.45[5] |
-1.18[6] |
-0.71[7] |
2 |
RPS27A |
Ubiquitin-40S ribosomal protein S27a |
[8] |
[9] |
[10] |
[11] |
[12] |
[13] |
[14] |
3 |
UBC |
Polyubiquitin-C |
[15] |
-0.75[16] |
-0.55[17] |
-1.05[18] |
-0.60[19] |
-0.81[20] |
-0.25[21] |
4 |
XRCC6 |
X-ray repair cross-complementing protein 6 |
[22] |
1.01[23] |
0.74[24] |
0.67[25] |
0.47[26] |
0.53[27] |
-0.29[28] |
5 |
NFKBIA |
NF-kappa-B inhibitor alpha |
[29] |
-0.05[30] |
-1.75[31] |
-2.39[32] |
-2.19[33] |
-0.50[34] |
0.03[35] |
6 |
POLR2L |
DNA-directed RNA polymerases I, II, and III subunit RPABC5 |
[36] |
-1.46[37] |
-1.39[38] |
-1.88[39] |
-0.87[40] |
-1.12[41] |
-0.17[42] |
7 |
UBA52 |
Ubiquitin-60S ribosomal protein L40 |
[43] |
1.69[44] |
1.68[45] |
2.47[46] |
0.80[47] |
1.42[48] |
0.52[49] |
8 |
XRCC5 |
X-ray repair cross-complementing protein 5 |
[50] |
2.07[51] |
2.27[52] |
1.88[53] |
2.15[54] |
2.18[55] |
1.32[56] |
9 |
CTNNB1 |
Catenin beta-1 |
[57] |
2.63[58] |
2.21[59] |
2.84[60] |
2.08[61] |
2.12[62] |
2.28[63] |
10 |
POLR1D |
DNA-directed RNA polymerases I and III subunit RPAC2 |
[64] |
0.54[65] |
1.30[66] |
0.74[67] |
-0.45[68] |
-0.75[69] |
-1.41[70] |
11 |
POLR2E |
DNA-directed RNA polymerases I, II, and III subunit RPABC1 |
[71] |
1.62[72] |
1.66[73] |
1.49[74] |
0.76[75] |
1.43[76] |
1.65[77] |
12 |
POLR2H |
DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
[78] |
-0.56[79] |
0.15[80] |
-0.14[81] |
-1.34[82] |
-0.85[83] |
-0.78[84] |
13 |
POLR2F |
DNA-directed RNA polymerases I, II, and III subunit RPABC2 |
[85] |
-0.26[86] |
0.07[87] |
-1.01[88] |
-1.27[89] |
-0.73[90] |
0.10[91] |
14 |
POLR2K |
DNA-directed RNA polymerases I, II, and III subunit RPABC4 |
[92] |
-0.58[93] |
0.36[94] |
0.00[95] |
0.38[96] |
0.09[97] |
-0.10[98] |
15 |
IKBKG |
NF-kappa-B essential modulator |
[99] |
0.12[100] |
0.36[101] |
-2.15[102] |
0.48[103] |
-0.93[104] |
0.57[105] |
16 |
LRRFIP1 |
Leucine-rich repeat flightless-interacting protein 1 |
[106] |
0.36[107] |
0.94[108] |
-0.02[109] |
0.98[110] |
1.38[111] |
1.86[112] |
17 |
DHX9 |
ATP-dependent RNA helicase A |
[113] |
2.35[114] |
2.38[115] |
1.94[116] |
3.10[117] |
2.61[118] |
1.77[119] |
18 |
POLR3GL |
DNA-directed RNA polymerase III subunit RPC7-like |
[120] |
-1.70[121] |
-0.78[122] |
-1.22[123] |
-0.52[124] |
-0.84[125] |
-0.66[126] |
19 |
NFKB2 |
Nuclear factor NF-kappa-B p100 subunit |
[127] |
0.24[128] |
0.63[129] |
0.82[130] |
-0.05[131] |
0.61[132] |
-1.85[133] |
20 |
RELA |
Transcription factor p65 |
[134] |
1.14[135] |
0.73[136] |
0.60[137] |
1.27[138] |
0.99[139] |
0.29[140] |
21 |
DDX41 |
Probable ATP-dependent RNA helicase DDX41 |
[141] |
1.03[142] |
0.96[143] |
1.42[144] |
0.97[145] |
0.65[146] |
0.22[147] |
22 |
STAT6 |
Signal transducer and activator of transcription 6 |
[148] |
1.36[149] |
1.69[150] |
0.34[151] |
2.18[152] |
1.88[153] |
1.87[154] |
23 |
POLR3K |
DNA-directed RNA polymerase III subunit RPC10 |
[155] |
-0.29[156] |
-0.37[157] |
-0.79[158] |
-1.38[159] |
-0.85[160] |
-1.73[161] |
24 |
NFKBIB |
NF-kappa-B inhibitor beta |
[162] |
-0.15[163] |
-0.24[164] |
-0.17[165] |
-0.48[166] |
-0.33[167] |
-0.56[168] |
25 |
MYD88 |
Myeloid differentiation primary response protein MyD88 |
[169] |
0.82[170] |
0.97[171] |
0.14[172] |
0.29[173] |
0.40[174] |
1.97[175] |
26 |
TRIM21 |
E3 ubiquitin-protein ligase TRIM21 |
[176] |
-1.09[177] |
-2.83[178] |
-3.63[179] |
-0.51[180] |
-1.68[181] |
-0.28[182] |
27 |
IRF7 |
Interferon regulatory factor 7 |
[183] |
-8.22[184] |
-7.14[185] |
-6.29[186] |
-1.82[187] |
-2.27[188] |
1.10[189] |
28 |
POLR1C |
DNA-directed RNA polymerases I and III subunit RPAC1 |
[190] |
0.91[191] |
0.97[192] |
-0.42[193] |
0.20[194] |
0.24[195] |
0.13[196] |
29 |
IRF3 |
Interferon regulatory factor 3 |
[197] |
1.31[198] |
1.57[199] |
2.03[200] |
1.68[201] |
1.08[202] |
-0.01[203] |
30 |
POLR3E |
DNA-directed RNA polymerase III subunit RPC5 |
[204] |
2.15[205] |
2.33[206] |
0.91[207] |
0.38[208] |
0.33[209] |
1.19[210] |
31 |
CRCP |
DNA-directed RNA polymerase III subunit RPC9 |
[211] |
1.24[212] |
1.05[213] |
1.15[214] |
1.73[215] |
0.77[216] |
1.49[217] |
32 |
POLR3C |
DNA-directed RNA polymerase III subunit RPC3 |
[218] |
0.50[219] |
0.21[220] |
-0.14[221] |
1.62[222] |
0.89[223] |
0.20[224] |
33 |
NKIRAS2 |
NF-kappa-B inhibitor-interacting Ras-like protein 2 |
[225] |
1.76[226] |
0.60[227] |
1.40[228] |
1.91[229] |
1.52[230] |
1.37[231] |
34 |
TBK1 |
Serine/threonine-protein kinase TBK1 |
[232] |
0.37[233] |
2.14[234] |
1.02[235] |
1.82[236] |
1.71[237] |
1.65[238] |
35 |
NFKB1 |
Nuclear factor NF-kappa-B p105 subunit |
[239] |
1.68[240] |
1.44[241] |
0.97[242] |
1.08[243] |
1.80[244] |
1.62[245] |
36 |
NKIRAS1 |
NF-kappa-B inhibitor-interacting Ras-like protein 1 |
[246] |
-0.36[247] |
-0.48[248] |
0.48[249] |
0.79[250] |
0.87[251] |
0.95[252] |
37 |
POLR3D |
DNA-directed RNA polymerase III subunit RPC4 |
[253] |
1.68[254] |
2.20[255] |
1.25[256] |
1.14[257] |
0.78[258] |
-0.05[259] |
38 |
POLR3H |
DNA-directed RNA polymerase III subunit RPC8 |
[260] |
1.84[261] |
1.35[262] |
1.88[263] |
1.78[264] |
1.71[265] |
2.19[266] |
39 |
DHX36 |
ATP-dependent RNA helicase DHX36 |
[267] |
0.99[268] |
2.05[269] |
1.45[270] |
2.39[271] |
2.52[272] |
2.02[273] |
40 |
TICAM1 |
TIR domain-containing adapter molecule 1 |
[274] |
0.30[275] |
-0.72[276] |
-0.04[277] |
0.11[278] |
0.96[279] |
0.67[280] |
41 |
RIPK1 |
Receptor-interacting serine/threonine-protein kinase 1 |
[281] |
1.30[282] |
1.55[283] |
0.97[284] |
2.41[285] |
1.74[286] |
2.65[287] |
42 |
POLR3A |
DNA-directed RNA polymerase III subunit RPC1 |
[288] |
2.97[289] |
3.50[290] |
2.53[291] |
2.50[292] |
2.36[293] |
2.17[294] |
43 |
CHUK |
Inhibitor of nuclear factor kappa-B kinase subunit alpha |
[295] |
1.91[296] |
3.22[297] |
2.92[298] |
1.98[299] |
2.60[300] |
2.69[301] |
44 |
POLR3F |
DNA-directed RNA polymerase III subunit RPC6 |
[302] |
0.96[303] |
1.62[304] |
0.79[305] |
1.34[306] |
1.04[307] |
-0.19[308] |
45 |
IKBKB |
Inhibitor of nuclear factor kappa-B kinase subunit beta |
[309] |
1.53[310] |
1.68[311] |
1.52[312] |
1.59[313] |
1.49[314] |
2.35[315] |
46 |
PRKDC |
DNA-dependent protein kinase catalytic subunit |
[316] |
5.22[317] |
4.78[318] |
6.41[319] |
6.22[320] |
6.11[321] |
5.41[322] |
47 |
POLR3G |
DNA-directed RNA polymerase III subunit RPC7 |
[323] |
-0.15[324] |
0.59[325] |
0.93[326] |
0.52[327] |
0.52[328] |
-0.57[329] |
48 |
POLR3B |
DNA-directed RNA polymerase III subunit RPC2 |
[330] |
1.27[331] |
2.00[332] |
1.62[333] |
1.92[334] |
1.89[335] |
2.94[336] |
49 |
DTX4 |
E3 ubiquitin-protein ligase DTX4 |
[337] |
1.90[338] |
2.00[339] |
2.96[340] |
2.11[341] |
-1.55[342] |
3.56[343] |
50 |
EP300 |
Histone acetyltransferase p300 |
[344] |
3.73[345] |
3.41[346] |
4.05[347] |
3.90[348] |
3.76[349] |
3.93[350] |
51 |
TREX1 |
Three-prime repair exonuclease 1 |
[351] |
-2.54[352] |
-1.16[353] |
-0.48[354] |
-0.40[355] |
1.84[356] |
0.35[357] |
52 |
TRIM56 |
E3 ubiquitin-protein ligase TRIM56 |
[358] |
1.66[359] |
1.05[360] |
2.07[361] |
2.67[362] |
2.66[363] |
2.69[364] |
53 |
IFI16 |
Gamma-interferon-inducible protein 16 |
[365] |
-4.43[366] |
-5.63[367] |
-4.74[368] |
5.44[369] |
5.03[370] |
2.09[371] |
54 |
CREBBP |
CREB-binding protein |
[372] |
3.91[373] |
3.21[374] |
3.56[375] |
4.09[376] |
3.90[377] |
4.41[378] |
55 |
TRIM32 |
E3 ubiquitin-protein ligase TRIM32 |
[379] |
2.96[380] |
2.10[381] |
2.92[382] |
3.27[383] |
4.15[384] |
2.70[385] |
56 |
TLR3 |
Toll-like receptor 3 |
[386] |
-2.83[387] |
-3.21[388] |
-3.79[389] |
0.96[390] |
1.85[391] |
2.22[392] |
57 |
RIPK3 |
Receptor-interacting serine/threonine-protein kinase 3 |
[393] |
-5.64[394] |
[395] |
-4.49[396] |
[397] |
-4.24[398] |
1.72[399] |
58 |
ZBP1 |
Z-DNA-binding protein 1 |
[400] |
-3.29[401] |
-2.39[402] |
-3.57[403] |
-1.37[404] |
-1.84[405] |
0.67[406] |
59 |
NLRC3 |
NLR family CARD domain-containing protein 3 |
[407] |
1.04[408] |
2.04[409] |
1.70[410] |
1.95[411] |
1.92[412] |
4.64[413] |
60 |
AIM2 |
Interferon-inducible protein AIM2 |
[414] |
[415] |
[416] |
[417] |
3.52[418] |
1.74[419] |
3.15[420] |
61 |
STING1 |
|
[421] |
[422] |
[423] |
[424] |
[425] |
[426] |
[427] |
62 |
CGAS |
|
[428] |
[429] |
[430] |
[431] |
[432] |
[433] |
[434] |
63 |
MRE11 |
Double-strand break repair protein MRE11 |
[435] |
[436] |
[437] |
[438] |
[439] |
[440] |
[441] |
64 |
NLRP4 |
NACHT, LRR and PYD domains-containing protein 4 |
[442] |
[443] |
[444] |
[445] |
[446] |
[447] |
[448] |
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