REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS |
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Order |
Gene |
Description |
ref_hepatocyte |
HepG2 |
HepG2.C3A |
HuH.7 |
SNU475 |
THLE |
liver |
1 |
POLR2L |
DNA-directed RNA polymerases I, II, and III subunit RPABC5 |
[1] |
-2.70[2] |
-2.82[3] |
-3.33[4] |
-2.29[5] |
-2.48[6] |
-1.31[7] |
2 |
SEC13 |
Protein SEC13 homolog |
[8] |
-1.18[9] |
-0.92[10] |
-1.00[11] |
-1.82[12] |
-1.79[13] |
-1.53[14] |
3 |
POLR2J |
DNA-directed RNA polymerase II subunit RPB11-a |
[15] |
-3.40[16] |
-3.22[17] |
-3.21[18] |
-3.52[19] |
-3.32[20] |
-3.06[21] |
4 |
POLR2E |
DNA-directed RNA polymerases I, II, and III subunit RPABC1 |
[22] |
0.38[23] |
0.22[24] |
0.04[25] |
-0.66[26] |
0.08[27] |
0.50[28] |
5 |
POLR2H |
DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
[29] |
-1.80[30] |
-1.29[31] |
-1.58[32] |
-2.77[33] |
-2.20[34] |
-1.93[35] |
6 |
POLR2F |
DNA-directed RNA polymerases I, II, and III subunit RPABC2 |
[36] |
-1.49[37] |
-1.37[38] |
-2.45[39] |
-2.69[40] |
-2.08[41] |
-1.04[42] |
7 |
POLR2K |
DNA-directed RNA polymerases I, II, and III subunit RPABC4 |
[43] |
-1.81[44] |
-1.08[45] |
-1.45[46] |
-1.05[47] |
-1.27[48] |
-1.25[49] |
8 |
POLR2G |
DNA-directed RNA polymerase II subunit RPB7 |
[50] |
-1.39[51] |
-1.22[52] |
-2.00[53] |
-1.25[54] |
-1.50[55] |
-1.80[56] |
9 |
GTF2F2 |
General transcription factor IIF subunit 2 |
[57] |
-2.17[58] |
-1.65[59] |
-1.60[60] |
-2.22[61] |
-2.11[62] |
-2.56[63] |
10 |
POLR2C |
DNA-directed RNA polymerase II subunit RPB3 |
[64] |
0.60[65] |
0.59[66] |
-0.18[67] |
-0.33[68] |
-0.23[69] |
-0.43[70] |
11 |
POLR2I |
DNA-directed RNA polymerase II subunit RPB9 |
[71] |
-1.81[72] |
-1.80[73] |
-2.15[74] |
-2.37[75] |
-2.41[76] |
-1.01[77] |
12 |
GTF2F1 |
General transcription factor IIF subunit 1 |
[78] |
0.16[79] |
-0.36[80] |
0.84[81] |
-0.49[82] |
-0.10[83] |
-1.24[84] |
13 |
RAE1 |
mRNA export factor |
[85] |
0.35[86] |
-0.05[87] |
-1.44[88] |
0.49[89] |
-0.33[90] |
-0.99[91] |
14 |
POLR2B |
DNA-directed RNA polymerase II subunit RPB2 |
[92] |
0.99[93] |
1.26[94] |
0.93[95] |
1.01[96] |
1.59[97] |
0.98[98] |
15 |
POLR2D |
DNA-directed RNA polymerase II subunit RPB4 |
[99] |
0.03[100] |
0.05[101] |
-0.93[102] |
-0.50[103] |
-0.40[104] |
-0.41[105] |
16 |
NUP88 |
Nuclear pore complex protein Nup88 |
[106] |
-0.28[107] |
0.13[108] |
-0.03[109] |
-0.42[110] |
-0.05[111] |
1.14[112] |
17 |
SEH1L |
Nucleoporin SEH1 |
[113] |
0.00[114] |
0.38[115] |
0.56[116] |
0.48[117] |
-0.42[118] |
0.21[119] |
18 |
NUP35 |
Nucleoporin NUP53 |
[120] |
-1.31[121] |
-0.84[122] |
-1.13[123] |
-1.18[124] |
-1.52[125] |
-1.20[126] |
19 |
POLR2A |
DNA-directed RNA polymerase II subunit RPB1 |
[127] |
2.51[128] |
0.93[129] |
1.66[130] |
2.06[131] |
2.33[132] |
1.82[133] |
20 |
NUP62 |
Nuclear pore glycoprotein p62 |
[134] |
0.95[135] |
0.44[136] |
1.23[137] |
1.12[138] |
1.07[139] |
0.44[140] |
21 |
NUP85 |
Nuclear pore complex protein Nup85 |
[141] |
0.52[142] |
0.76[143] |
0.73[144] |
0.48[145] |
0.56[146] |
0.25[147] |
22 |
AAAS |
Aladin |
[148] |
0.04[149] |
0.24[150] |
-0.43[151] |
0.12[152] |
0.03[153] |
-0.16[154] |
23 |
NUP50 |
Nuclear pore complex protein Nup50 |
[155] |
0.55[156] |
1.11[157] |
1.25[158] |
0.89[159] |
1.25[160] |
1.58[161] |
24 |
RANBP2 |
E3 SUMO-protein ligase RanBP2 |
[162] |
0.25[163] |
1.82[164] |
1.29[165] |
1.44[166] |
1.47[167] |
2.97[168] |
25 |
NUP93 |
Nuclear pore complex protein Nup93 |
[169] |
1.45[170] |
0.86[171] |
0.57[172] |
0.85[173] |
1.02[174] |
-0.48[175] |
26 |
NUP98 |
Nuclear pore complex protein Nup98-Nup96 |
[176] |
1.95[177] |
1.52[178] |
1.51[179] |
2.14[180] |
1.56[181] |
1.88[182] |
27 |
NUP54 |
Nucleoporin p54 |
[183] |
-0.12[184] |
0.41[185] |
0.14[186] |
0.24[187] |
0.58[188] |
0.04[189] |
28 |
NUP107 |
Nuclear pore complex protein Nup107 |
[190] |
0.28[191] |
1.27[192] |
0.99[193] |
1.20[194] |
0.99[195] |
0.02[196] |
29 |
NUP37 |
Nucleoporin Nup37 |
[197] |
0.43[198] |
0.60[199] |
0.43[200] |
0.36[201] |
0.22[202] |
-1.40[203] |
30 |
TPR |
Nucleoprotein TPR |
[204] |
0.41[205] |
2.16[206] |
2.20[207] |
2.45[208] |
2.55[209] |
2.62[210] |
31 |
NUP160 |
Nuclear pore complex protein Nup160 |
[211] |
1.63[212] |
1.66[213] |
2.00[214] |
1.08[215] |
1.25[216] |
1.50[217] |
32 |
POM121 |
Nuclear envelope pore membrane protein POM 121 |
[218] |
1.22[219] |
1.46[220] |
1.03[221] |
1.46[222] |
0.77[223] |
1.32[224] |
33 |
NUP133 |
Nuclear pore complex protein Nup133 |
[225] |
0.96[226] |
1.19[227] |
1.88[228] |
2.12[229] |
1.33[230] |
1.07[231] |
34 |
NUP153 |
Nuclear pore complex protein Nup153 |
[232] |
2.17[233] |
2.25[234] |
1.62[235] |
3.17[236] |
2.19[237] |
1.96[238] |
35 |
NUP43 |
Nucleoporin Nup43 |
[239] |
1.69[240] |
1.75[241] |
1.23[242] |
1.99[243] |
1.59[244] |
0.34[245] |
36 |
NUP205 |
Nuclear pore complex protein Nup205 |
[246] |
1.96[247] |
1.76[248] |
2.66[249] |
2.69[250] |
2.73[251] |
1.53[252] |
37 |
POM121C |
Nuclear envelope pore membrane protein POM 121C |
[253] |
1.06[254] |
0.21[255] |
-0.39[256] |
1.31[257] |
0.61[258] |
0.46[259] |
38 |
NUP214 |
Nuclear pore complex protein Nup214 |
[260] |
1.80[261] |
1.00[262] |
1.85[263] |
2.09[264] |
1.89[265] |
1.78[266] |
39 |
NUP188 |
Nucleoporin NUP188 homolog |
[267] |
3.04[268] |
2.30[269] |
2.67[270] |
2.43[271] |
3.47[272] |
1.85[273] |
40 |
NUP210 |
Nuclear pore membrane glycoprotein 210 |
[274] |
3.48[275] |
3.18[276] |
4.01[277] |
2.01[278] |
0.27[279] |
3.02[280] |
41 |
NUP155 |
Nuclear pore complex protein Nup155 |
[281] |
1.89[282] |
1.38[283] |
2.10[284] |
2.38[285] |
3.13[286] |
1.76[287] |
42 |
NUP58 |
Nucleoporin p58/p45 |
[288] |
[289] |
[290] |
[291] |
[292] |
[293] |
[294] |
43 |
NUP42 |
|
[295] |
[296] |
[297] |
[298] |
[299] |
[300] |
[301] |
44 |
NDC1 |
Nucleoporin NDC1 |
[302] |
[303] |
[304] |
[305] |
[306] |
[307] |
[308] |
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