REACTOME_TRNA_PROCESSING_IN_THE_NUCLEUS | Return to index | ||||||||
Order | Gene | Description | ref_hepatocyte | HepG2 | HepG2.C3A | HuH.7 | SNU475 | THLE | liver |
1 | RAN | GTP-binding nuclear protein Ran | [1] | -0.69[2] | -0.79[3] | -1.57[4] | -1.42[5] | -1.21[6] | -2.34[7] |
2 | SEC13 | Protein SEC13 homolog | [8] | -1.27[9] | -1.13[10] | -1.07[11] | -1.99[12] | -1.86[13] | -1.96[14] |
3 | DDX1 | ATP-dependent RNA helicase DDX1 | [15] | -0.41[16] | -0.11[17] | -0.52[18] | 0.22[19] | -0.58[20] | -1.04[21] |
4 | XPOT | Exportin-T | [22] | 0.16[23] | 0.61[24] | 0.58[25] | -0.12[26] | 0.69[27] | 0.00[28] |
5 | POP7 | Ribonuclease P protein subunit p20 | [29] | -1.56[30] | -1.30[31] | -1.52[32] | -2.20[33] | -1.92[34] | -1.92[35] |
6 | RPP21 | Ribonuclease P protein subunit p21 | [36] | -4.56[37] | -4.60[38] | -5.46[39] | -5.18[40] | -5.30[41] | -5.95[42] |
7 | ZBTB8OS | Protein archease | [43] | -2.05[44] | -1.78[45] | -2.47[46] | -2.29[47] | -2.32[48] | -3.01[49] |
8 | POP5 | Ribonuclease P/MRP protein subunit POP5 | [50] | -1.25[51] | -0.95[52] | -1.18[53] | -1.39[54] | -0.84[55] | -1.74[56] |
9 | ELAC2 | Zinc phosphodiesterase ELAC protein 2 | [57] | 0.28[58] | -0.05[59] | 0.06[60] | 0.34[61] | 0.19[62] | 0.54[63] |
10 | RAE1 | mRNA export factor | [64] | 0.25[65] | -0.26[66] | -1.51[67] | 0.31[68] | -0.40[69] | -1.42[70] |
11 | NUP88 | Nuclear pore complex protein Nup88 | [71] | -0.38[72] | -0.08[73] | -0.10[74] | -0.59[75] | -0.12[76] | 0.72[77] |
12 | SEH1L | Nucleoporin SEH1 | [78] | -0.09[79] | 0.17[80] | 0.49[81] | 0.31[82] | -0.49[83] | -0.22[84] |
13 | TSEN34 | tRNA-splicing endonuclease subunit Sen34 | [85] | 0.39[86] | 0.63[87] | 0.27[88] | 0.26[89] | -0.29[90] | -1.17[91] |
14 | POP4 | Ribonuclease P protein subunit p29 | [92] | -0.89[93] | -1.09[94] | -1.05[95] | -0.60[96] | -0.72[97] | -0.63[98] |
15 | TSEN15 | tRNA-splicing endonuclease subunit Sen15 | [99] | -0.60[100] | -0.52[101] | -1.25[102] | 0.13[103] | -0.04[104] | -1.02[105] |
16 | NUP35 | Nucleoporin NUP53 | [106] | -1.41[107] | -1.05[108] | -1.20[109] | -1.36[110] | -1.59[111] | -1.62[112] |
17 | NUP62 | Nuclear pore glycoprotein p62 | [113] | 0.85[114] | 0.23[115] | 1.16[116] | 0.95[117] | 1.01[118] | 0.02[119] |
18 | NUP85 | Nuclear pore complex protein Nup85 | [120] | 0.42[121] | 0.55[122] | 0.67[123] | 0.31[124] | 0.49[125] | -0.18[126] |
19 | AAAS | Aladin | [127] | -0.06[128] | 0.04[129] | -0.50[130] | -0.05[131] | -0.04[132] | -0.59[133] |
20 | CPSF4 | Cleavage and polyadenylation specificity factor subunit 4 | [134] | 0.20[135] | -0.26[136] | -0.20[137] | -0.48[138] | -0.55[139] | -2.00[140] |
21 | NUP50 | Nuclear pore complex protein Nup50 | [141] | 0.45[142] | 0.90[143] | 1.18[144] | 0.72[145] | 1.19[146] | 1.16[147] |
22 | RANBP2 | E3 SUMO-protein ligase RanBP2 | [148] | 0.16[149] | 1.61[150] | 1.23[151] | 1.27[152] | 1.40[153] | 2.55[154] |
23 | NUP93 | Nuclear pore complex protein Nup93 | [155] | 1.35[156] | 0.65[157] | 0.50[158] | 0.67[159] | 0.95[160] | -0.91[161] |
24 | NUP98 | Nuclear pore complex protein Nup98-Nup96 | [162] | 1.85[163] | 1.31[164] | 1.45[165] | 1.96[166] | 1.50[167] | 1.46[168] |
25 | NUP54 | Nucleoporin p54 | [169] | -0.22[170] | 0.20[171] | 0.07[172] | 0.07[173] | 0.51[174] | -0.39[175] |
26 | CPSF1 | Cleavage and polyadenylation specificity factor subunit 1 | [176] | 1.64[177] | 1.47[178] | 1.77[179] | 1.10[180] | 0.58[181] | 0.57[182] |
27 | NUP107 | Nuclear pore complex protein Nup107 | [183] | 0.18[184] | 1.06[185] | 0.92[186] | 1.03[187] | 0.93[188] | -0.40[189] |
28 | NUP37 | Nucleoporin Nup37 | [190] | 0.34[191] | 0.39[192] | 0.36[193] | 0.19[194] | 0.15[195] | -1.82[196] |
29 | TPR | Nucleoprotein TPR | [197] | 0.31[198] | 1.95[199] | 2.13[200] | 2.28[201] | 2.48[202] | 2.19[203] |
30 | C2orf49 | Ashwin | [204] | -1.40[205] | -1.42[206] | -1.84[207] | -1.64[208] | -1.72[209] | -2.10[210] |
31 | FAM98B | Protein FAM98B | [211] | -1.13[212] | -1.41[213] | -1.60[214] | -0.01[215] | -0.06[216] | -3.39[217] |
32 | RPP14 | Ribonuclease P protein subunit p14 | [218] | 0.02[219] | -0.25[220] | -0.81[221] | -0.72[222] | 0.28[223] | 0.83[224] |
33 | RPP38 | Ribonuclease P protein subunit p38 | [225] | -0.93[226] | -0.73[227] | -1.38[228] | -0.06[229] | -0.73[230] | -1.10[231] |
34 | TSEN54 | tRNA-splicing endonuclease subunit Sen54 | [232] | 0.72[233] | 1.05[234] | 0.18[235] | -0.26[236] | -0.74[237] | -1.03[238] |
35 | NUP160 | Nuclear pore complex protein Nup160 | [239] | 1.54[240] | 1.46[241] | 1.93[242] | 0.91[243] | 1.18[244] | 1.07[245] |
36 | POM121 | Nuclear envelope pore membrane protein POM 121 | [246] | 1.12[247] | 1.25[248] | 0.96[249] | 1.28[250] | 0.70[251] | 0.90[252] |
37 | NUP133 | Nuclear pore complex protein Nup133 | [253] | 0.87[254] | 0.98[255] | 1.82[256] | 1.95[257] | 1.26[258] | 0.65[259] |
38 | CSTF2 | Cleavage stimulation factor subunit 2 | [260] | 0.42[261] | -0.26[262] | 0.10[263] | 0.77[264] | 0.61[265] | -1.11[266] |
39 | NUP153 | Nuclear pore complex protein Nup153 | [267] | 2.08[268] | 2.04[269] | 1.56[270] | 3.00[271] | 2.13[272] | 1.54[273] |
40 | RPP40 | Ribonuclease P protein subunit p40 | [274] | -0.15[275] | -0.14[276] | -2.92[277] | 0.05[278] | -1.17[279] | -1.29[280] |
41 | RPP30 | Ribonuclease P protein subunit p30 | [281] | 0.39[282] | 0.65[283] | -0.26[284] | 0.09[285] | 1.48[286] | -0.44[287] |
42 | NUP43 | Nucleoporin Nup43 | [288] | 1.59[289] | 1.54[290] | 1.16[291] | 1.82[292] | 1.53[293] | -0.09[294] |
43 | NUP205 | Nuclear pore complex protein Nup205 | [295] | 1.86[296] | 1.55[297] | 2.60[298] | 2.52[299] | 2.66[300] | 1.11[301] |
44 | CLP1 | Polyribonucleotide 5'-hydroxyl-kinase Clp1 | [302] | 0.29[303] | -0.38[304] | 1.02[305] | -0.34[306] | -0.10[307] | -0.75[308] |
45 | POM121C | Nuclear envelope pore membrane protein POM 121C | [309] | 0.96[310] | 0.00[311] | -0.46[312] | 1.14[313] | 0.54[314] | 0.03[315] |
46 | TRNT1 | CCA tRNA nucleotidyltransferase 1, mitochondrial | [316] | -0.28[317] | -0.15[318] | -0.21[319] | -0.55[320] | -0.42[321] | 0.16[322] |
47 | NUP214 | Nuclear pore complex protein Nup214 | [323] | 1.70[324] | 0.79[325] | 1.78[326] | 1.92[327] | 1.82[328] | 1.36[329] |
48 | NUP188 | Nucleoporin NUP188 homolog | [330] | 2.94[331] | 2.09[332] | 2.60[333] | 2.26[334] | 3.40[335] | 1.43[336] |
49 | NUP210 | Nuclear pore membrane glycoprotein 210 | [337] | 3.38[338] | 2.97[339] | 3.94[340] | 1.84[341] | 0.21[342] | 2.59[343] |
50 | NUP155 | Nuclear pore complex protein Nup155 | [344] | 1.80[345] | 1.17[346] | 2.03[347] | 2.21[348] | 3.06[349] | 1.34[350] |
51 | TSEN2 | tRNA-splicing endonuclease subunit Sen2 | [351] | -0.32[352] | -0.09[353] | 0.02[354] | -0.82[355] | -0.27[356] | 0.28[357] |
52 | POP1 | Ribonucleases P/MRP protein subunit POP1 | [358] | 1.15[359] | 0.48[360] | 1.61[361] | 1.93[362] | 2.15[363] | 0.27[364] |
53 | RPP25 | Ribonuclease P protein subunit p25 | [365] | -2.58[366] | -4.34[367] | 1.36[368] | 1.60[369] | 1.94[370] | -0.16[371] |
54 | NUP42 | [372] | [373] | [374] | [375] | [376] | [377] | [378] | |
55 | RPPH1 | [379] | [380] | [381] | [382] | [383] | [384] | [385] | |
56 | NUP58 | Nucleoporin p58/p45 | [386] | [387] | [388] | [389] | [390] | [391] | [392] |
57 | NDC1 | Nucleoporin NDC1 | [393] | [394] | [395] | [396] | [397] | [398] | [399] |
58 | RTCB | tRNA-splicing ligase RtcB homolog | [400] | [401] | [402] | [403] | [404] | [405] | [406] |
59 | RTRAF | RNA transcription, translation and transport factor protein | [407] | [408] | [409] | [410] | [411] | [412] | [413] |