REACTOME_TRNA_MODIFICATION_IN_THE_MITOCHONDRION Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 [1] -1.33[2] -1.88[3] -1.85[4] -0.94[5] -0.70[6] -0.39[7]
2 PUS1 tRNA pseudouridine synthase A [8] 0.98[9] 1.02[10] 0.56[11] 0.00[12] -0.38[13] -1.38[14]
3 TRMU Mitochondrial tRNA-specific 2-thiouridylase 1 [15] 0.89[16] 1.13[17] 0.53[18] 0.24[19] 0.17[20] 0.30[21]
4 MTO1 Protein MTO1 homolog, mitochondrial [22] 0.81[23] 0.78[24] 1.59[25] 0.98[26] 0.79[27] 1.42[28]
5 TRIT1 tRNA dimethylallyltransferase [29] 1.06[30] 0.86[31] 0.95[32] 1.86[33] 1.28[34] -0.19[35]
6 TRMT61B tRNA (adenine(58)-N(1))-methyltransferase, mitochondrial [36] 0.77[37] 1.12[38] 0.73[39] 1.01[40] 0.75[41] 0.04[42]
7 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial [43] 2.21[44] 2.41[45] 2.69[46] 0.93[47] 1.04[48] 0.02[49]
8 PRORP [50] [51] [52] [53] [54] [55] [56]
9 TRMT10C tRNA methyltransferase 10 homolog C [57] [58] [59] [60] [61] [62] [63]
[1]
ref_hepatocyte HSD17B10
Mean 85.5
Standard deviation 74
Values 14 52 31 1.7e+02 1.7e+02
[2]
HepG2 HSD17B10
Mean 28.7
Standard deviation 2
Values 27 30
[3]
HepG2.C3A HSD17B10
Mean 21.3
Standard deviation 2.8
Values 19 23
[4]
HuH.7 HSD17B10
Mean 24.2
Standard deviation 9.3
Values 26 14 32
[5]
SNU475 HSD17B10
Mean 26.6
Standard deviation 1.5
Values 26 28
[6]
THLE HSD17B10
Mean 51.1
Standard deviation 6
Values 47 55
[7]
liver HSD17B10
Mean 61.9
Standard deviation 43
Values 95 25 1e+02 24
[8]
ref_hepatocyte PUS1
Mean 9.63
Standard deviation 4.8
Values 7.1 6.4 17 11 6.2
[9]
HepG2 PUS1
Mean 16
Standard deviation 3.7
Values 19 13
[10]
HepG2.C3A PUS1
Mean 18
Standard deviation 3.1
Values 20 16
[11]
HuH.7 PUS1
Mean 14.5
Standard deviation 5.5
Values 15 8.5 19
[12]
SNU475 PUS1
Mean 5.76
Standard deviation 0.75
Values 5.2 6.3
[13]
THLE PUS1
Mean 7.18
Standard deviation 1.3
Values 6.3 8.1
[14]
liver PUS1
Mean 3.52
Standard deviation 0.71
Values 4.2 3 4 2.9
[15]
ref_hepatocyte TRMU
Mean 7.18
Standard deviation 2.8
Values 6.5 11 4.8 8.5 4.7
[16]
HepG2 TRMU
Mean 11.2
Standard deviation 3.3
Values 8.9 14
[17]
HepG2.C3A TRMU
Mean 14.5
Standard deviation 1.8
Values 13 16
[18]
HuH.7 TRMU
Mean 10.6
Standard deviation 3.5
Values 10 7.4 14
[19]
SNU475 TRMU
Mean 5.07
Standard deviation 0.52
Values 4.7 5.4
[20]
THLE TRMU
Mean 7.83
Standard deviation 1.3
Values 6.9 8.7
[21]
liver TRMU
Mean 8.42
Standard deviation 4.8
Values 9.8 5.2 15 4.1
[22]
ref_hepatocyte MTO1
Mean 7.09
Standard deviation 1.9
Values 7.4 9.4 4.1 7.3 7.3
[23]
HepG2 MTO1
Mean 10.5
Standard deviation 2.8
Values 8.5 12
[24]
HepG2.C3A MTO1
Mean 11.2
Standard deviation 1.9
Values 9.9 13
[25]
HuH.7 MTO1
Mean 21.8
Standard deviation 4.4
Values 27 18 21
[26]
SNU475 MTO1
Mean 8.36
Standard deviation 0.62
Values 7.9 8.8
[27]
THLE MTO1
Mean 11.9
Standard deviation 0.08
Values 12 12
[28]
liver MTO1
Mean 18
Standard deviation 4.9
Values 11 22 18 21
[29]
ref_hepatocyte TRIT1
Mean 4.59
Standard deviation 1.9
Values 4.5 4.4 7.7 3.9 2.5
[30]
HepG2 TRIT1
Mean 8.08
Standard deviation 0.87
Values 7.5 8.7
[31]
HepG2.C3A TRIT1
Mean 7.66
Standard deviation 0.027
Values 7.6 7.7
[32]
HuH.7 TRIT1
Mean 9.05
Standard deviation 2.5
Values 8.3 7 12
[33]
SNU475 TRIT1
Mean 9.98
Standard deviation 0.91
Values 9.3 11
[34]
THLE TRIT1
Mean 10.8
Standard deviation 0.064
Values 11 11
[35]
liver TRIT1
Mean 3.81
Standard deviation 0.34
Values 4.1 4 3.3 3.8
[36]
ref_hepatocyte TRMT61B
Mean 3.81
Standard deviation 1.5
Values 4.5 5.9 2.2 2.5 4
[37]
HepG2 TRMT61B
Mean 5.47
Standard deviation 0.6
Values 5 5.9
[38]
HepG2.C3A TRMT61B
Mean 7.65
Standard deviation 0.4
Values 7.4 7.9
[39]
HuH.7 TRMT61B
Mean 6.47
Standard deviation 2.4
Values 7.2 3.8 8.4
[40]
SNU475 TRMT61B
Mean 4.59
Standard deviation 0.71
Values 5.1 4.1
[41]
THLE TRMT61B
Mean 6.22
Standard deviation 0.36
Values 6.5 6
[42]
liver TRMT61B
Mean 3.71
Standard deviation 0.98
Values 4 3.6 4.8 2.4
[43]
ref_hepatocyte GTPBP3
Mean 3.37
Standard deviation 1.7
Values 6.3 3.1 2.2 3.1 2.2
[44]
HepG2 GTPBP3
Mean 13.2
Standard deviation 2.3
Values 15 12
[45]
HepG2.C3A GTPBP3
Mean 16.5
Standard deviation 2
Values 18 15
[46]
HuH.7 GTPBP3
Mean 22.3
Standard deviation 8.8
Values 24 13 30
[47]
SNU475 GTPBP3
Mean 3.86
Standard deviation 0.91
Values 3.2 4.5
[48]
THLE GTPBP3
Mean 6.77
Standard deviation 0.48
Values 6.4 7.1
[49]
liver GTPBP3
Mean 3.25
Standard deviation 0.79
Values 3.9 2.5 3.9 2.7
[50]
ref_hepatocyte PRORP
Missing
[51]
HepG2 PRORP
Missing
[52]
HepG2.C3A PRORP
Missing
[53]
HuH.7 PRORP
Missing
[54]
SNU475 PRORP
Missing
[55]
THLE PRORP
Missing
[56]
liver PRORP
Missing
[57]
ref_hepatocyte TRMT10C
Missing
[58]
HepG2 TRMT10C
Mean 9.17
Standard deviation 3.1
Values 7 11
[59]
HepG2.C3A TRMT10C
Mean 14.8
Standard deviation 6.3
Values 10 19
[60]
HuH.7 TRMT10C
Mean 15
Standard deviation 3.6
Values 16 11 18
[61]
SNU475 TRMT10C
Mean 8.3
Standard deviation 1.6
Values 7.2 9.4
[62]
THLE TRMT10C
Mean 16
Standard deviation 0.56
Values 16 16
[63]
liver TRMT10C
Mean 12.5
Standard deviation 9.2
Values 23 5.1 18 4.4