REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM | Return to index | ||||||||
Order | Gene | Description | ref_hepatocyte | HepG2 | HepG2.C3A | HuH.7 | SNU475 | THLE | liver |
1 | U2AF1 | Splicing factor U2AF 35 kDa subunit | [1] | -2.34[2] | -2.95[3] | -3.45[4] | -2.56[5] | -2.75[6] | -3.86[7] |
2 | SRSF5 | Serine/arginine-rich splicing factor 5 | [8] | -1.92[9] | -1.53[10] | -2.11[11] | -2.19[12] | -1.87[13] | -0.83[14] |
3 | SRSF9 | Serine/arginine-rich splicing factor 9 | [15] | -1.80[16] | -2.04[17] | -2.29[18] | -1.94[19] | -2.05[20] | -2.01[21] |
4 | SEC13 | Protein SEC13 homolog | [22] | -0.97[23] | -0.93[24] | -0.83[25] | -1.70[26] | -1.66[27] | -1.32[28] |
5 | SRSF2 | Serine/arginine-rich splicing factor 2 | [29] | -0.37[30] | 0.25[31] | -0.56[32] | -0.54[33] | -0.49[34] | -0.36[35] |
6 | SRSF3 | Serine/arginine-rich splicing factor 3 | [36] | 0.36[37] | 0.43[38] | 0.30[39] | 0.12[40] | 0.16[41] | -0.06[42] |
7 | DDX39B | Spliceosome RNA helicase DDX39B | [43] | -9.96[44] | -9.95[45] | -10.55[46] | -9.36[47] | -8.61[48] | -10.90[49] |
8 | EIF4A3 | Eukaryotic initiation factor 4A-III | [50] | -0.27[51] | -1.13[52] | -0.99[53] | -1.06[54] | -0.94[55] | -1.51[56] |
9 | SRSF1 | Serine/arginine-rich splicing factor 1 | [57] | 0.69[58] | 0.90[59] | 0.59[60] | 0.52[61] | 0.55[62] | 0.95[63] |
10 | ALYREF | THO complex subunit 4 | [64] | -0.53[65] | -1.16[66] | -1.71[67] | -1.44[68] | -1.37[69] | -3.68[70] |
11 | SARNP | SAP domain-containing ribonucleoprotein | [71] | -1.51[72] | -1.38[73] | -1.27[74] | -1.64[75] | -1.17[76] | -2.23[77] |
12 | THOC7 | THO complex subunit 7 homolog | [78] | -2.15[79] | -1.95[80] | -3.06[81] | -2.15[82] | -1.70[83] | -2.05[84] |
13 | SRSF11 | Serine/arginine-rich splicing factor 11 | [85] | -0.73[86] | 0.53[87] | -0.40[88] | 0.19[89] | 0.22[90] | 0.39[91] |
14 | MAGOH | Protein mago nashi homolog | [92] | -2.06[93] | -2.25[94] | -2.53[95] | -2.42[96] | -2.31[97] | -3.00[98] |
15 | U2AF2 | Splicing factor U2AF 65 kDa subunit | [99] | 0.66[100] | 0.04[101] | 0.54[102] | 0.39[103] | 0.43[104] | -1.32[105] |
16 | RNPS1 | RNA-binding protein with serine-rich domain 1 | [106] | 0.67[107] | 0.00[108] | 0.46[109] | -0.33[110] | 0.25[111] | -0.93[112] |
17 | THOC3 | THO complex subunit 3 | [113] | -3.21[114] | -3.98[115] | -2.64[116] | -3.34[117] | -3.34[118] | -3.97[119] |
18 | NCBP2 | Nuclear cap-binding protein subunit 2 | [120] | -0.48[121] | -0.36[122] | -0.37[123] | -0.84[124] | -0.70[125] | -1.10[126] |
19 | SRSF7 | Serine/arginine-rich splicing factor 7 | [127] | 0.27[128] | 0.52[129] | 0.13[130] | 0.08[131] | 0.19[132] | 0.43[133] |
20 | SRSF6 | Serine/arginine-rich splicing factor 6 | [134] | 1.30[135] | 1.88[136] | 0.79[137] | 0.92[138] | 0.80[139] | 1.76[140] |
21 | SRSF4 | Serine/arginine-rich splicing factor 4 | [141] | -0.28[142] | -0.16[143] | 0.01[144] | -0.20[145] | 0.12[146] | 0.19[147] |
22 | EIF4E | Eukaryotic translation initiation factor 4E | [148] | 0.12[149] | 0.61[150] | -0.11[151] | -0.24[152] | 0.67[153] | 0.41[154] |
23 | DDX39A | ATP-dependent RNA helicase DDX39A | [155] | -0.26[156] | -0.56[157] | 0.21[158] | -0.56[159] | 0.22[160] | -0.50[161] |
24 | SLBP | Histone RNA hairpin-binding protein | [162] | 0.40[163] | -0.14[164] | 0.56[165] | 0.82[166] | 0.79[167] | -0.63[168] |
25 | CASC3 | Protein CASC3 | [169] | 0.85[170] | -0.48[171] | 0.62[172] | 0.41[173] | 0.49[174] | -0.04[175] |
26 | RBM8A | RNA-binding protein 8A | [176] | 0.14[177] | -0.28[178] | -0.52[179] | 0.64[180] | 0.24[181] | 0.33[182] |
27 | NXT1 | NTF2-related export protein 1 | [183] | -0.53[184] | -0.92[185] | -2.00[186] | -1.77[187] | -1.64[188] | -2.55[189] |
28 | RAE1 | mRNA export factor | [190] | 0.56[191] | -0.06[192] | -1.28[193] | 0.61[194] | -0.20[195] | -0.78[196] |
29 | CHTOP | Chromatin target of PRMT1 protein | [197] | 0.01[198] | 0.07[199] | 0.62[200] | 0.18[201] | 0.50[202] | -0.77[203] |
30 | FIP1L1 | Pre-mRNA 3'-end-processing factor FIP1 | [204] | -0.75[205] | -0.79[206] | -0.74[207] | 0.10[208] | -0.24[209] | -0.62[210] |
31 | ZC3H11A | Zinc finger CCCH domain-containing protein 11A | [211] | 0.06[212] | 0.68[213] | 1.04[214] | 1.27[215] | 1.01[216] | 1.78[217] |
32 | NUP88 | Nuclear pore complex protein Nup88 | [218] | -0.07[219] | 0.11[220] | 0.13[221] | -0.30[222] | 0.09[223] | 1.35[224] |
33 | SEH1L | Nucleoporin SEH1 | [225] | 0.21[226] | 0.36[227] | 0.73[228] | 0.60[229] | -0.29[230] | 0.42[231] |
34 | DHX38 | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 | [232] | 0.85[233] | 0.64[234] | 0.60[235] | 0.57[236] | 0.59[237] | 0.35[238] |
35 | SRRM1 | Serine/arginine repetitive matrix protein 1 | [239] | 0.09[240] | 1.26[241] | 0.68[242] | 0.86[243] | 0.75[244] | 0.87[245] |
36 | CPSF3 | Cleavage and polyadenylation specificity factor subunit 3 | [246] | 0.21[247] | 0.30[248] | 0.06[249] | 0.70[250] | 0.19[251] | -0.19[252] |
37 | SLU7 | Pre-mRNA-splicing factor SLU7 | [253] | -0.40[254] | -0.02[255] | -0.23[256] | 0.24[257] | 0.22[258] | -0.09[259] |
38 | NUP35 | Nucleoporin NUP53 | [260] | -1.10[261] | -0.86[262] | -0.96[263] | -1.06[264] | -1.39[265] | -0.98[266] |
39 | FYTTD1 | UAP56-interacting factor | [267] | -0.27[268] | 0.22[269] | -0.24[270] | 0.73[271] | 1.19[272] | 1.31[273] |
40 | NXF1 | Nuclear RNA export factor 1 | [274] | 0.18[275] | 0.35[276] | -0.36[277] | 0.10[278] | 0.52[279] | 1.88[280] |
41 | NUP62 | Nuclear pore glycoprotein p62 | [281] | 1.15[282] | 0.42[283] | 1.39[284] | 1.24[285] | 1.21[286] | 0.66[287] |
42 | POLDIP3 | Polymerase delta-interacting protein 3 | [288] | 1.39[289] | 1.21[290] | 1.24[291] | 0.71[292] | 1.07[293] | 0.75[294] |
43 | CPSF2 | Cleavage and polyadenylation specificity factor subunit 2 | [295] | 0.51[296] | 0.74[297] | 0.63[298] | 1.57[299] | 1.45[300] | 1.16[301] |
44 | THOC5 | THO complex subunit 5 homolog | [302] | 0.71[303] | 0.64[304] | 1.52[305] | 0.29[306] | -0.17[307] | 0.02[308] |
45 | NUP85 | Nuclear pore complex protein Nup85 | [309] | 0.73[310] | 0.74[311] | 0.90[312] | 0.61[313] | 0.70[314] | 0.46[315] |
46 | AAAS | Aladin | [316] | 0.25[317] | 0.23[318] | -0.26[319] | 0.24[320] | 0.17[321] | 0.05[322] |
47 | SYMPK | Symplekin | [323] | 1.65[324] | 1.06[325] | 2.01[326] | 0.95[327] | 1.37[328] | 0.62[329] |
48 | THOC6 | THO complex subunit 6 homolog | [330] | 0.00[331] | -0.24[332] | -0.92[333] | -0.78[334] | -1.02[335] | -1.21[336] |
49 | CPSF4 | Cleavage and polyadenylation specificity factor subunit 4 | [337] | 0.51[338] | -0.06[339] | 0.03[340] | -0.19[341] | -0.35[342] | -1.36[343] |
50 | NUP50 | Nuclear pore complex protein Nup50 | [344] | 0.75[345] | 1.10[346] | 1.42[347] | 1.02[348] | 1.39[349] | 1.80[350] |
51 | RANBP2 | E3 SUMO-protein ligase RanBP2 | [351] | 0.46[352] | 1.80[353] | 1.46[354] | 1.57[355] | 1.61[356] | 3.19[357] |
52 | NUP93 | Nuclear pore complex protein Nup93 | [358] | 1.66[359] | 0.84[360] | 0.73[361] | 0.97[362] | 1.16[363] | -0.27[364] |
53 | NUP98 | Nuclear pore complex protein Nup98-Nup96 | [365] | 2.15[366] | 1.50[367] | 1.68[368] | 2.26[369] | 1.70[370] | 2.10[371] |
54 | NUP54 | Nucleoporin p54 | [372] | 0.09[373] | 0.39[374] | 0.30[375] | 0.36[376] | 0.72[377] | 0.25[378] |
55 | WDR33 | pre-mRNA 3' end processing protein WDR33 | [379] | 1.67[380] | 1.66[381] | 1.39[382] | 1.25[383] | 1.18[384] | 2.02[385] |
56 | CPSF1 | Cleavage and polyadenylation specificity factor subunit 1 | [386] | 1.94[387] | 1.66[388] | 2.01[389] | 1.39[390] | 0.79[391] | 1.21[392] |
57 | THOC1 | THO complex subunit 1 | [393] | -0.94[394] | 0.26[395] | -0.02[396] | 0.67[397] | -0.17[398] | -0.51[399] |
58 | NUP107 | Nuclear pore complex protein Nup107 | [400] | 0.48[401] | 1.26[402] | 1.16[403] | 1.32[404] | 1.13[405] | 0.24[406] |
59 | UPF3B | Regulator of nonsense transcripts 3B | [407] | -2.35[408] | -0.88[409] | -0.77[410] | 0.14[411] | -0.40[412] | -0.93[413] |
60 | NUP37 | Nucleoporin Nup37 | [414] | 0.64[415] | 0.59[416] | 0.59[417] | 0.48[418] | 0.36[419] | -1.19[420] |
61 | TPR | Nucleoprotein TPR | [421] | 0.62[422] | 2.14[423] | 2.37[424] | 2.57[425] | 2.69[426] | 2.83[427] |
62 | GLE1 | Nucleoporin GLE1 | [428] | 0.54[429] | 0.40[430] | 0.14[431] | 1.01[432] | 0.60[433] | 0.89[434] |
63 | NCBP1 | Nuclear cap-binding protein subunit 1 | [435] | 1.24[436] | 1.12[437] | 0.85[438] | 1.79[439] | 2.22[440] | 1.48[441] |
64 | THOC2 | THO complex subunit 2 | [442] | 0.38[443] | 1.77[444] | 2.21[445] | 1.72[446] | 1.36[447] | 2.15[448] |
65 | NUP160 | Nuclear pore complex protein Nup160 | [449] | 1.84[450] | 1.65[451] | 2.17[452] | 1.21[453] | 1.39[454] | 1.71[455] |
66 | POM121 | Nuclear envelope pore membrane protein POM 121 | [456] | 1.43[457] | 1.44[458] | 1.20[459] | 1.58[460] | 0.91[461] | 1.53[462] |
67 | NUP133 | Nuclear pore complex protein Nup133 | [463] | 1.17[464] | 1.18[465] | 2.05[466] | 2.24[467] | 1.47[468] | 1.29[469] |
68 | NUP153 | Nuclear pore complex protein Nup153 | [470] | 2.38[471] | 2.24[472] | 1.79[473] | 3.29[474] | 2.33[475] | 2.18[476] |
69 | NUP43 | Nucleoporin Nup43 | [477] | 1.90[478] | 1.73[479] | 1.40[480] | 2.11[481] | 1.73[482] | 0.55[483] |
70 | NUP205 | Nuclear pore complex protein Nup205 | [484] | 2.17[485] | 1.74[486] | 2.83[487] | 2.81[488] | 2.87[489] | 1.75[490] |
71 | CDC40 | Pre-mRNA-processing factor 17 | [491] | 0.30[492] | 0.71[493] | 0.80[494] | 0.85[495] | 1.20[496] | 1.48[497] |
72 | POM121C | Nuclear envelope pore membrane protein POM 121C | [498] | 1.26[499] | 0.19[500] | -0.22[501] | 1.43[502] | 0.74[503] | 0.67[504] |
73 | MAGOHB | Protein mago nashi homolog 2 | [505] | -0.53[506] | -0.15[507] | 0.26[508] | 0.01[509] | 0.09[510] | 0.56[511] |
74 | NUP214 | Nuclear pore complex protein Nup214 | [512] | 2.01[513] | 0.98[514] | 2.02[515] | 2.22[516] | 2.03[517] | 2.00[518] |
75 | NUP188 | Nucleoporin NUP188 homolog | [519] | 3.25[520] | 2.29[521] | 2.84[522] | 2.55[523] | 3.61[524] | 2.06[525] |
76 | NUP210 | Nuclear pore membrane glycoprotein 210 | [526] | 3.69[527] | 3.16[528] | 4.18[529] | 2.14[530] | 0.41[531] | 3.23[532] |
77 | NUP155 | Nuclear pore complex protein Nup155 | [533] | 2.10[534] | 1.36[535] | 2.27[536] | 2.51[537] | 3.26[538] | 1.98[539] |
78 | U2AF1L4 | Splicing factor U2AF 26 kDa subunit | [540] | -1.70[541] | -1.66[542] | -1.21[543] | -0.94[544] | -1.48[545] | 0.27[546] |
79 | NDC1 | Nucleoporin NDC1 | [547] | [548] | [549] | [550] | [551] | [552] | [553] |
80 | NXF2B | [554] | [555] | [556] | [557] | [558] | [559] | [560] | |
81 | NUP42 | [561] | [562] | [563] | [564] | [565] | [566] | [567] | |
82 | NXF2 | Nuclear RNA export factor 2 | [568] | [569] | [570] | [571] | [572] | [573] | [574] |
83 | LUZP4 | Leucine zipper protein 4 | [575] | [576] | [577] | [578] | [579] | [580] | [581] |
84 | NUP58 | Nucleoporin p58/p45 | [582] | [583] | [584] | [585] | [586] | [587] | [588] |