REACTOME_SMALL_INTERFERING_RNA_SIRNA_BIOGENESIS Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 TSN Translin [1] -0.41[2] -0.60[3] -1.13[4] -1.16[5] -0.61[6] -1.69[7]
2 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A -0.36[8] 0.07[9] -0.52[10] -0.99[11] -0.68[12] -2.01[13]
3 TSNAX Translin-associated protein X [14] -1.26[15] -1.17[16] -0.63[17] -0.13[18] -0.46[19] -1.30[20]
4 TARBP2 RISC-loading complex subunit TARBP2 [21] -0.65[22] -0.31[23] -0.25[24] -1.36[25] -0.78[26] -1.65[27]
5 DICER1 Endoribonuclease Dicer [28] 0.98[29] 1.74[30] 0.86[31] 2.12[32] 1.40[33] 2.77[34]
6 AGO2 Protein argonaute-2 [35] [36] [37] [38] [39] [40] [41]
7 AGO4 Protein argonaute-4 [42] [43] [44] [45] [46] [47] [48]
8 AGO3 Protein argonaute-3 [49] [50] [51] [52] [53] [54] [55]
9 AGO1 Protein argonaute-1 [56] [57] [58] [59] [60] [61] [62]
[1]
ref_hepatocyte TSN
Mean 21.1
Standard deviation 15
Values 40 35 10 9.4 12
[2]
HepG2 TSN
Mean 57.2
Standard deviation 8.6
Values 51 63
[3]
HepG2.C3A TSN
Mean 58.3
Standard deviation 17
Values 46 71
[4]
HuH.7 TSN
Mean 30.1
Standard deviation 9
Values 35 20 36
[5]
SNU475 TSN
Mean 35
Standard deviation 0.27
Values 35 35
[6]
THLE TSN
Mean 42.3
Standard deviation 5.2
Values 39 46
[7]
liver TSN
Mean 20.6
Standard deviation 8.7
Values 21 18 32 11
[8]
ref_hepatocyte PRKRA
Mean 7.79
Standard deviation 4.9
Values 16 4.6 3.5 6.9 8.2
[9]
HepG2 PRKRA
Mean 21.8
Standard deviation 0.36
Values 22 22
[10]
HepG2.C3A PRKRA
Mean 34.2
Standard deviation 1.4
Values 33 35
[11]
HuH.7 PRKRA
Mean 17
Standard deviation 1.6
Values 18 15 18
[12]
SNU475 PRKRA
Mean 14.5
Standard deviation 1.6
Values 16 13
[13]
THLE PRKRA
Mean 15
Standard deviation 1.4
Values 16 14
[14]
liver PRKRA
Mean 6.09
Standard deviation 3
Values 9.1 3.6 8.1 3.5
[15]
ref_hepatocyte TSNAX
Mean 7.38
Standard deviation 4.4
Values 13 10 3.6 3 6.7
[16]
HepG2 TSNAX
Mean 11.1
Standard deviation 1.7
Values 9.9 12
[17]
HepG2.C3A TSNAX
Mean 13.8
Standard deviation 2.8
Values 12 16
[18]
HuH.7 TSNAX
Mean 14.9
Standard deviation 3.8
Values 17 11 17
[19]
SNU475 TSNAX
Mean 25
Standard deviation 4
Values 28 22
[20]
THLE TSNAX
Mean 16.4
Standard deviation 0.7
Values 16 17
[21]
liver TSNAX
Mean 9.48
Standard deviation 3.7
Values 14 6.3 12 6.3
[22]
ref_hepatocyte TARBP2
Mean 6.68
Standard deviation 3.9
Values 2.5 4 5.2 11 11
[23]
HepG2 TARBP2
Mean 15.3
Standard deviation 0.75
Values 15 16
[24]
HepG2.C3A TARBP2
Mean 22.6
Standard deviation 3.4
Values 20 25
[25]
HuH.7 TARBP2
Mean 17.6
Standard deviation 4.1
Values 17 14 22
[26]
SNU475 TARBP2
Mean 9.7
Standard deviation 1.1
Values 10 8.9
[27]
THLE TARBP2
Mean 12
Standard deviation 2.2
Values 10 14
[28]
liver TARBP2
Mean 6.7
Standard deviation 3.6
Values 9 3.6 10 3.7
[29]
ref_hepatocyte DICER1
Mean 2.81
Standard deviation 0.99
Values 4.4 3.1 2.4 2 2.2
[30]
HepG2 DICER1
Mean 20
Standard deviation 7.9
Values 14 26
[31]
HepG2.C3A DICER1
Mean 39.2
Standard deviation 6.9
Values 34 44
[32]
HuH.7 DICER1
Mean 16
Standard deviation 3.7
Values 19 16 12
[33]
SNU475 DICER1
Mean 45.5
Standard deviation 10
Values 53 38
[34]
THLE DICER1
Mean 22.8
Standard deviation 3.2
Values 25 21
[35]
liver DICER1
Mean 60.6
Standard deviation 26
Values 42 90 35 75
[36]
ref_hepatocyte AGO2
Missing
[37]
HepG2 AGO2
Mean 8.7
Standard deviation 0.3
Values 8.5 8.9
[38]
HepG2.C3A AGO2
Mean 3.98
Standard deviation 0.75
Values 3.5 4.5
[39]
HuH.7 AGO2
Mean 7.66
Standard deviation 4.2
Values 11 9.3 2.9
[40]
SNU475 AGO2
Mean 7.03
Standard deviation 0.082
Values 7 7.1
[41]
THLE AGO2
Mean 8.62
Standard deviation 3.3
Values 6.3 11
[42]
liver AGO2
Mean 6.59
Standard deviation 5
Values 2.8 10 1.8 12
[43]
ref_hepatocyte AGO4
Missing
[44]
HepG2 AGO4
Mean 7.33
Standard deviation 0.39
Values 7.6 7
[45]
HepG2.C3A AGO4
Mean 6.02
Standard deviation 1.9
Values 7.4 4.7
[46]
HuH.7 AGO4
Mean 9.39
Standard deviation 3
Values 8.7 13 6.8
[47]
SNU475 AGO4
Mean 7.87
Standard deviation 2.6
Values 9.7 6
[48]
THLE AGO4
Mean 6.07
Standard deviation 0.55
Values 6.5 5.7
[49]
liver AGO4
Mean 12.1
Standard deviation 8.6
Values 4.5 22 5.4 16
[50]
ref_hepatocyte AGO3
Missing
[51]
HepG2 AGO3
Mean 3.11
Standard deviation 1.2
Values 2.3 3.9
[52]
HepG2.C3A AGO3
Mean 2.68
Standard deviation 0.41
Values 2.4 3
[53]
HuH.7 AGO3
Mean 2.94
Standard deviation 0.85
Values 3 3.8 2.1
[54]
SNU475 AGO3
Mean 4.2
Standard deviation 0.38
Values 4.5 3.9
[55]
THLE AGO3
Mean 3.9
Standard deviation 0.43
Values 3.6 4.2
[56]
liver AGO3
Mean 9.72
Standard deviation 3.7
Values 7.4 13 5.8 12
[57]
ref_hepatocyte AGO1
Missing
[58]
HepG2 AGO1
Mean 20.3
Standard deviation 2.8
Values 18 22
[59]
HepG2.C3A AGO1
Mean 11.1
Standard deviation 1.1
Values 10 12
[60]
HuH.7 AGO1
Mean 27.7
Standard deviation 9.7
Values 39 23 21
[61]
SNU475 AGO1
Mean 21.2
Standard deviation 5.4
Values 25 17
[62]
THLE AGO1
Mean 13.5
Standard deviation 1.7
Values 12 15
[63]
liver AGO1
Mean 12.3
Standard deviation 5.7
Values 8.4 15 6.8 19