REACTOME_BASE_EXCISION_REPAIR | Return to index | ||||||||
Order | Gene | Description | ref_hepatocyte | HepG2 | HepG2.C3A | HuH.7 | SNU475 | THLE | liver |
1 | APEX1 | DNA-(apurinic or apyrimidinic site) lyase | [1] | 0.15[2] | -0.35[3] | 0.29[4] | -0.82[5] | -1.16[6] | -0.94[7] |
2 | PARP1 | Poly [ADP-ribose] polymerase 1 | [8] | 0.18[9] | -0.22[10] | 0.24[11] | 0.52[12] | 0.04[13] | 0.32[14] |
3 | PCNA | Proliferating cell nuclear antigen | [15] | 0.94[16] | 0.77[17] | -0.91[18] | -0.22[19] | 0.07[20] | -2.34[21] |
4 | POLD2 | DNA polymerase delta subunit 2 | [22] | -0.55[23] | -0.53[24] | -0.29[25] | -0.87[26] | -0.50[27] | 0.61[28] |
5 | POLD4 | DNA polymerase delta subunit 4 | [29] | -2.08[30] | -2.58[31] | -0.77[32] | 1.44[33] | -2.14[34] | 0.26[35] |
6 | POLE3 | DNA polymerase epsilon subunit 3 | [36] | -0.73[37] | -1.03[38] | -1.01[39] | -1.06[40] | -0.02[41] | -0.84[42] |
7 | POLE4 | DNA polymerase epsilon subunit 4 | [43] | -1.00[44] | -0.41[45] | -4.14[46] | -1.64[47] | -2.10[48] | -1.07[49] |
8 | RPA2 | Replication protein A 32 kDa subunit | [50] | -1.41[51] | -1.49[52] | -1.20[53] | -0.75[54] | -0.67[55] | -1.66[56] |
9 | MPG | DNA-3-methyladenine glycosylase | [57] | -0.63[58] | -0.04[59] | -1.41[60] | -2.33[61] | -1.77[62] | -0.77[63] |
10 | TERF2IP | Telomeric repeat-binding factor 2-interacting protein 1 | [64] | -0.56[65] | -0.38[66] | -0.65[67] | -0.92[68] | -0.50[69] | -0.15[70] |
11 | NTHL1 | Endonuclease III-like protein 1 | [71] | -1.15[72] | -0.90[73] | -1.91[74] | -2.28[75] | -2.48[76] | 0.31[77] |
12 | UNG | Uracil-DNA glycosylase | [78] | 0.56[79] | 0.37[80] | 0.52[81] | -1.12[82] | -0.36[83] | -0.36[84] |
13 | SMUG1 | Single-strand selective monofunctional uracil DNA glycosylase | [85] | -0.72[86] | -0.64[87] | -0.87[88] | -0.59[89] | -1.05[90] | 0.14[91] |
14 | RFC4 | Replication factor C subunit 4 | [92] | -0.92[93] | -0.44[94] | -0.14[95] | -0.98[96] | 0.37[97] | -2.02[98] |
15 | POLB | DNA polymerase beta | [99] | -0.88[100] | -0.99[101] | -1.21[102] | -2.29[103] | -2.09[104] | -0.77[105] |
16 | PARP2 | Poly [ADP-ribose] polymerase 2 | [106] | -0.02[107] | -0.55[108] | -0.06[109] | -0.28[110] | 0.50[111] | -0.74[112] |
17 | RFC1 | Replication factor C subunit 1 | [113] | 0.19[114] | 1.33[115] | 1.44[116] | 0.31[117] | 1.16[118] | 1.52[119] |
18 | RFC2 | Replication factor C subunit 2 | [120] | -0.21[121] | -0.51[122] | -0.74[123] | 0.17[124] | 0.64[125] | -0.04[126] |
19 | FEN1 | Flap endonuclease 1 | [127] | 1.08[128] | 0.71[129] | 1.30[130] | 0.67[131] | 1.58[132] | -0.36[133] |
20 | RPA1 | Replication protein A 70 kDa DNA-binding subunit | [134] | 1.36[135] | 0.95[136] | 0.95[137] | 1.84[138] | 1.87[139] | 0.74[140] |
21 | RPA3 | Replication protein A 14 kDa subunit | [141] | -0.32[142] | 0.33[143] | 0.78[144] | -0.91[145] | -0.62[146] | 0.04[147] |
22 | TINF2 | TERF1-interacting nuclear factor 2 | [148] | 0.82[149] | -0.68[150] | -0.95[151] | -0.10[152] | -0.10[153] | 0.54[154] |
23 | NEIL2 | Endonuclease 8-like 2 | [155] | -1.18[156] | -1.40[157] | -2.15[158] | -3.00[159] | -2.94[160] | -0.29[161] |
24 | PNKP | Bifunctional polynucleotide phosphatase/kinase | [162] | -0.93[163] | -0.74[164] | -0.08[165] | -0.94[166] | -0.47[167] | 0.43[168] |
25 | MBD4 | Methyl-CpG-binding domain protein 4 | [169] | -0.65[170] | -0.08[171] | 0.08[172] | 0.36[173] | 1.13[174] | 1.50[175] |
26 | TDG | G/T mismatch-specific thymine DNA glycosylase | [176] | -0.27[177] | 0.61[178] | 0.07[179] | 1.51[180] | 0.89[181] | 0.65[182] |
27 | RFC5 | Replication factor C subunit 5 | [183] | 0.18[184] | 0.49[185] | 0.41[186] | 0.26[187] | 0.80[188] | -0.14[189] |
28 | OGG1 | N-glycosylase/DNA lyase | [190] | 0.47[191] | 0.43[192] | 0.26[193] | -0.60[194] | -0.73[195] | 0.01[196] |
29 | TERF1 | Telomeric repeat-binding factor 1 | [197] | -0.85[198] | 0.14[199] | 0.12[200] | 1.22[201] | 0.31[202] | 0.71[203] |
30 | PARG | Poly(ADP-ribose) glycohydrolase | [204] | -0.03[205] | 0.85[206] | -0.35[207] | 0.75[208] | 0.40[209] | 1.20[210] |
31 | TERF2 | Telomeric repeat-binding factor 2 | [211] | 0.35[212] | 0.21[213] | 0.71[214] | -0.09[215] | 0.32[216] | 0.30[217] |
32 | XRCC1 | DNA repair protein XRCC1 | [218] | 0.68[219] | 0.72[220] | 1.52[221] | 0.76[222] | 0.75[223] | -0.19[224] |
33 | RFC3 | Replication factor C subunit 3 | [225] | 1.22[226] | 1.94[227] | 1.80[228] | 1.24[229] | 1.85[230] | -0.13[231] |
34 | LIG3 | DNA ligase 3 | [232] | 1.23[233] | 1.12[234] | 1.92[235] | 1.07[236] | 0.13[237] | 1.60[238] |
35 | LIG1 | DNA ligase 1 | [239] | 1.68[240] | 1.55[241] | 1.91[242] | 0.50[243] | 1.25[244] | 0.37[245] |
36 | POLD1 | DNA polymerase delta catalytic subunit | [246] | 1.91[247] | 1.98[248] | 2.53[249] | 1.82[250] | 2.58[251] | 1.40[252] |
37 | POT1 | Protection of telomeres protein 1 | [253] | 0.06[254] | 1.19[255] | 1.16[256] | 1.76[257] | 1.52[258] | 1.53[259] |
38 | ACD | Adrenocortical dysplasia protein homolog | [260] | 1.75[261] | 1.87[262] | 1.37[263] | 0.75[264] | 1.49[265] | 0.05[266] |
39 | MUTYH | Adenine DNA glycosylase | [267] | 0.33[268] | 1.21[269] | 1.81[270] | -0.09[271] | 0.10[272] | 0.68[273] |
40 | NEIL1 | Endonuclease 8-like 1 | [274] | -1.43[275] | -0.52[276] | -1.94[277] | -2.44[278] | -1.21[279] | 1.70[280] |
41 | POLD3 | DNA polymerase delta subunit 3 | [281] | 1.22[282] | 0.94[283] | 1.64[284] | 2.11[285] | 2.60[286] | 1.72[287] |
42 | POLE | DNA polymerase epsilon catalytic subunit A | [288] | 3.09[289] | 3.57[290] | 3.34[291] | 2.73[292] | 3.75[293] | 3.67[294] |
43 | POLE2 | DNA polymerase epsilon subunit 2 | [295] | 0.75[296] | 1.40[297] | 2.11[298] | 1.15[299] | 1.69[300] | -0.42[301] |
44 | NEIL3 | Endonuclease 8-like 3 | [302] | 2.48[303] | 2.60[304] | 3.52[305] | 4.28[306] | 4.38[307] | -0.51[308] |
45 | H2AZ1 | [309] | [310] | [311] | [312] | [313] | [314] | [315] | |
46 | H2BC6 | [316] | [317] | [318] | [319] | [320] | [321] | [322] | |
47 | H2BC10 | [323] | [324] | [325] | [326] | [327] | [328] | [329] | |
48 | H2AC6 | [330] | [331] | [332] | [333] | [334] | [335] | [336] | |
49 | H2BU1 | [337] | [338] | [339] | [340] | [341] | [342] | [343] | |
50 | H4C11 | [344] | [345] | [346] | [347] | [348] | [349] | [350] | |
51 | H4C4 | [351] | [352] | [353] | [354] | [355] | [356] | [357] | |
52 | H2BC15 | [358] | [359] | [360] | [361] | [362] | [363] | [364] | |
53 | H2AB1 | [365] | [366] | [367] | [368] | [369] | [370] | [371] | |
54 | H3-4 | [372] | [373] | [374] | [375] | [376] | [377] | [378] | |
55 | H4C5 | [379] | [380] | [381] | [382] | [383] | [384] | [385] | |
56 | H4C8 | [386] | [387] | [388] | [389] | [390] | [391] | [392] | |
57 | ADPRS | [393] | [394] | [395] | [396] | [397] | [398] | [399] | |
58 | H2BC1 | [400] | [401] | [402] | [403] | [404] | [405] | [406] | |
59 | H2AC7 | [407] | [408] | [409] | [410] | [411] | [412] | [413] | |
60 | H2BC3 | [414] | [415] | [416] | [417] | [418] | [419] | [420] | |
61 | H2AZ2 | [421] | [422] | [423] | [424] | [425] | [426] | [427] | |
62 | H4-16 | [428] | [429] | [430] | [431] | [432] | [433] | [434] | |
63 | H2BC9 | [435] | [436] | [437] | [438] | [439] | [440] | [441] | |
64 | H2BC7 | [442] | [443] | [444] | [445] | [446] | [447] | [448] | |
65 | H4C13 | [449] | [450] | [451] | [452] | [453] | [454] | [455] | |
66 | H2AC20 | [456] | [457] | [458] | [459] | [460] | [461] | [462] | |
67 | H4C12 | [463] | [464] | [465] | [466] | [467] | [468] | [469] | |
68 | H4C9 | [470] | [471] | [472] | [473] | [474] | [475] | [476] | |
69 | H2BS1 | [477] | [478] | [479] | [480] | [481] | [482] | [483] | |
70 | H4C3 | [484] | [485] | [486] | [487] | [488] | [489] | [490] | |
71 | H2BC13 | [491] | [492] | [493] | [494] | [495] | [496] | [497] | |
72 | H4C2 | [498] | [499] | [500] | [501] | [502] | [503] | [504] | |
73 | H2BC12 | [505] | [506] | [507] | [508] | [509] | [510] | [511] | |
74 | H2BC11 | [512] | [513] | [514] | [515] | [516] | [517] | [518] | |
75 | H2BC5 | [519] | [520] | [521] | [522] | [523] | [524] | [525] | |
76 | H2AC14 | [526] | [527] | [528] | [529] | [530] | [531] | [532] | |
77 | H2AC8 | [533] | [534] | [535] | [536] | [537] | [538] | [539] | |
78 | H2BC8 | [540] | [541] | [542] | [543] | [544] | [545] | [546] | |
79 | H2BC14 | [547] | [548] | [549] | [550] | [551] | [552] | [553] | |
80 | H4C1 | [554] | [555] | [556] | [557] | [558] | [559] | [560] | |
81 | H4C15 | [561] | [562] | [563] | [564] | [565] | [566] | [567] | |
82 | H2BC4 | [568] | [569] | [570] | [571] | [572] | [573] | [574] | |
83 | H2BC21 | [575] | [576] | [577] | [578] | [579] | [580] | [581] | |
84 | H2AJ | [582] | [583] | [584] | [585] | [586] | [587] | [588] | |
85 | H2BC17 | [589] | [590] | [591] | [592] | [593] | [594] | [595] | |
86 | H2AC4 | [596] | [597] | [598] | [599] | [600] | [601] | [602] | |
87 | H4C14 | [603] | [604] | [605] | [606] | [607] | [608] | [609] | |
88 | H4C6 | [610] | [611] | [612] | [613] | [614] | [615] | [616] | |
89 | H2AX | [617] | [618] | [619] | [620] | [621] | [622] | [623] |