REACTOME_SERINE_BIOSYNTHESIS Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 SERINC1 Serine incorporator 1 [1] -0.67[2] -0.29[3] -1.22[4] 0.59[5] 0.24[6] 0.03[7]
2 PSAT1 Phosphoserine aminotransferase [8] 0.38[9] 0.40[10] 0.09[11] -1.80[12] 0.19[13] -0.18[14]
3 PHGDH D-3-phosphoglycerate dehydrogenase [15] -0.56[16] -0.21[17] 0.68[18] -1.23[19] -0.01[20] -0.68[21]
4 SERINC2 Serine incorporator 2 [22] 0.11[23] -1.32[24] -1.52[25] -2.89[26] -2.33[27] -1.27[28]
5 SERINC3 Serine incorporator 3 [29] 0.66[30] 0.22[31] -0.48[32] 2.02[33] 0.87[34] 0.71[35]
6 PSPH Phosphoserine phosphatase [36] 0.58[37] 1.34[38] 1.35[39] 0.00[40] -0.12[41] -2.32[42]
7 SERINC5 Serine incorporator 5 [43] 0.56[44] 0.40[45] 1.75[46] 0.19[47] -1.69[48] 2.89[49]
8 SRR Serine racemase [50] -1.40[51] -0.66[52] -0.48[53] 0.99[54] 0.67[55] -0.80[56]
9 SERINC4 Serine incorporator 4 [57] 2.36[58] 5.11[59] 4.57[60] 4.92[61] 4.39[62] 3.47[63]
[1]
ref_hepatocyte SERINC1
Mean 59.6
Standard deviation 25
Values 80 85 28 38 68
[2]
HepG2 SERINC1
Mean 93.5
Standard deviation 25
Values 76 1.1e+02
[3]
HepG2.C3A SERINC1
Mean 110
Standard deviation 6
Values 1.1e+02 1.1e+02
[4]
HuH.7 SERINC1
Mean 72.1
Standard deviation 22
Values 65 96 55
[5]
SNU475 SERINC1
Mean 86.9
Standard deviation 17
Values 99 75
[6]
THLE SERINC1
Mean 112
Standard deviation 4.7
Values 1.1e+02 1.1e+02
[7]
liver SERINC1
Mean 108
Standard deviation 21
Values 1.2e+02 1.1e+02 1.2e+02 78
[8]
ref_hepatocyte PSAT1
Mean 48.6
Standard deviation 21
Values 72 24 30 63 54
[9]
HepG2 PSAT1
Mean 158
Standard deviation 47
Values 1.9e+02 1.2e+02
[10]
HepG2.C3A PSAT1
Mean 145
Standard deviation 27
Values 1.6e+02 1.3e+02
[11]
HuH.7 PSAT1
Mean 145
Standard deviation 48
Values 1.8e+02 90 1.7e+02
[12]
SNU475 PSAT1
Mean 13.6
Standard deviation 1.7
Values 12 15
[13]
THLE PSAT1
Mean 88.3
Standard deviation 16
Values 1e+02 77
[14]
liver PSAT1
Mean 76.6
Standard deviation 64
Values 1.6e+02 29 97 21
[15]
ref_hepatocyte PHGDH
Mean 45.5
Standard deviation 35
Values 71 5.4 10 79 62
[16]
HepG2 PHGDH
Mean 77.2
Standard deviation 35
Values 1e+02 52
[17]
HepG2.C3A PHGDH
Mean 88.7
Standard deviation 46
Values 1.2e+02 56
[18]
HuH.7 PHGDH
Mean 205
Standard deviation 72
Values 2.5e+02 1.2e+02 2.5e+02
[19]
SNU475 PHGDH
Mean 18.9
Standard deviation 2.5
Values 21 17
[20]
THLE PHGDH
Mean 71.9
Standard deviation 8.2
Values 78 66
[21]
liver PHGDH
Mean 50.7
Standard deviation 47
Values 1.2e+02 21 46 17
[22]
ref_hepatocyte SERINC2
Mean 36.8
Standard deviation 27
Values 9.7 15 53 74 32
[23]
HepG2 SERINC2
Mean 99.1
Standard deviation 65
Values 1.5e+02 53
[24]
HepG2.C3A SERINC2
Mean 33.2
Standard deviation 21
Values 48 19
[25]
HuH.7 SERINC2
Mean 36
Standard deviation 19
Values 27 57 24
[26]
SNU475 SERINC2
Mean 4.81
Standard deviation 2.1
Values 3.3 6.3
[27]
THLE SERINC2
Mean 11.6
Standard deviation 3.4
Values 14 9.2
[28]
liver SERINC2
Mean 27.1
Standard deviation 22
Values 46 5.1 46 12
[29]
ref_hepatocyte SERINC3
Mean 19.6
Standard deviation 7.6
Values 31 24 18 13 13
[30]
HepG2 SERINC3
Mean 77.6
Standard deviation 2.5
Values 76 79
[31]
HepG2.C3A SERINC3
Mean 51.6
Standard deviation 5.9
Values 56 47
[32]
HuH.7 SERINC3
Mean 39.5
Standard deviation 7.8
Values 40 47 32
[33]
SNU475 SERINC3
Mean 77.5
Standard deviation 19
Values 91 64
[34]
THLE SERINC3
Mean 57.1
Standard deviation 8.9
Values 51 63
[35]
liver SERINC3
Mean 57.2
Standard deviation 23
Values 73 38 81 36
[36]
ref_hepatocyte PSPH
Mean 11.7
Standard deviation 13
Values 34 9.2 4.2 7.2 4
[37]
HepG2 PSPH
Mean 44
Standard deviation 1.8
Values 43 45
[38]
HepG2.C3A PSPH
Mean 67
Standard deviation 1.9
Values 66 68
[39]
HuH.7 PSPH
Mean 83.9
Standard deviation 11
Values 77 78 97
[40]
SNU475 PSPH
Mean 11.4
Standard deviation 1.7
Values 13 10
[41]
THLE PSPH
Mean 17.2
Standard deviation 0.015
Values 17 17
[42]
liver PSPH
Mean 4.2
Standard deviation 1.7
Values 6.7 3.1 3.8 3.3
[43]
ref_hepatocyte SERINC5
Mean 6.36
Standard deviation 3.4
Values 6.4 3.9 3.1 6.6 12
[44]
HepG2 SERINC5
Mean 23.5
Standard deviation 2.5
Values 22 25
[45]
HepG2.C3A SERINC5
Mean 18.8
Standard deviation 1.8
Values 20 18
[46]
HuH.7 SERINC5
Mean 60
Standard deviation 14
Values 61 74 45
[47]
SNU475 SERINC5
Mean 7.04
Standard deviation 2.8
Values 9 5.1
[48]
THLE SERINC5
Mean 3.13
Standard deviation 0.22
Values 3 3.3
[49]
liver SERINC5
Mean 84.1
Standard deviation 9.9
Values 72 96 86 83
[50]
ref_hepatocyte SRR
Mean 1.54
Standard deviation 0.55
Values 0.95 1.3 1.9 1.3 2.3
[51]
HepG2 SRR
Mean 1.46
Standard deviation 0.22
Values 1.6 1.3
[52]
HepG2.C3A SRR
Mean 2.19
Standard deviation 0.14
Values 2.3 2.1
[53]
HuH.7 SRR
Mean 3.1
Standard deviation 0.66
Values 3.9 2.8 2.7
[54]
SNU475 SRR
Mean 2.96
Standard deviation 0.9
Values 3.6 2.3
[55]
THLE SRR
Mean 3.88
Standard deviation 0.3
Values 3.7 4.1
[56]
liver SRR
Mean 1.58
Standard deviation 0.76
Values 1.9 1.2 2.4 0.71
[57]
ref_hepatocyte SERINC4
Mean 0.0114
Standard deviation 0.025
Values 0 0 0 0 0.057
[58]
HepG2 SERINC4
Mean 0.146
Standard deviation 0.012
Values 0.15 0.14
[59]
HepG2.C3A SERINC4
Mean 0.884
Standard deviation 0.69
Values 1.4 0.4
[60]
HuH.7 SERINC4
Mean 0.762
Standard deviation 0.48
Values 0.48 1.3 0.49
[61]
SNU475 SERINC4
Mean 0.335
Standard deviation 0.21
Values 0.48 0.19
[62]
THLE SERINC4
Mean 0.38
Standard deviation 0.2
Values 0.52 0.24
[63]
liver SERINC4
Mean 0.224
Standard deviation 0.21
Values 0.024 0.24 0.13 0.5