REACTOME_SCAVENGING_BY_CLASS_A_RECEPTORS Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 FTL Ferritin light chain [1] 0.04[2] -0.56[3] -0.37[4] 0.66[5] -0.66[6] -0.77[7]
2 APOA1 Apolipoprotein A-I [8] -1.96[9] -0.87[10] -3.00[11] -11.99[12] -11.13[13] -0.65[14]
3 APOE Apolipoprotein E [15] -1.38[16] -1.20[17] -0.71[18] -8.70[19] -6.93[20] -1.34[21]
4 FTH1 Ferritin heavy chain [22] 1.12[23] -0.22[24] 1.43[25] 1.24[26] 2.47[27] -0.68[28]
5 CALR Calreticulin [29] 1.31[30] 0.65[31] 0.90[32] -0.06[33] 1.25[34] -0.50[35]
6 HSP90B1 Endoplasmin [36] 0.99[37] 2.44[38] 1.89[39] 1.20[40] 2.15[41] 0.47[42]
7 APOB Apolipoprotein B-100 [43] 4.22[44] 4.80[45] 4.48[46] -5.37[47] -4.29[48] 5.36[49]
8 MARCO Macrophage receptor MARCO [50] -6.92[51] [52] -5.42[53] -4.54[54] -4.96[55] 0.78[56]
9 MASP1 Mannan-binding lectin serine protease 1 [57] 2.60[58] 3.29[59] 5.76[60] -4.41[61] -3.57[62] 3.43[63]
10 COLEC11 Collectin-11 [64] 0.85[65] 0.95[66] 0.88[67] -3.09[68] -1.32[69] 4.60[70]
11 MSR1 Macrophage scavenger receptor types I and II [71] -6.90[72] [73] -0.81[74] 2.73[75] [76] 3.32[77]
12 COL4A2 Collagen alpha-2(IV) chain [78] 2.21[79] 2.34[80] 0.15[81] 9.26[82] 10.18[83] 5.65[84]
13 COL3A1 Collagen alpha-1(III) chain [85] 1.28[86] -0.51[87] 2.38[88] 12.03[89] 11.26[90] 8.10[91]
14 COL1A1 Collagen alpha-1(I) chain [92] 7.02[93] -0.69[94] 1.64[95] 9.08[96] 11.63[97] 6.85[98]
15 COL1A2 Collagen alpha-2(I) chain [99] -3.87[100] -3.99[101] -1.00[102] 7.05[103] 8.10[104] 6.92[105]
16 COL4A1 Collagen alpha-1(IV) chain [106] -0.45[107] -1.64[108] 0.22[109] 9.46[110] 10.25[111] 6.57[112]
17 COLEC12 Collectin-12 [113] 2.47[114] -3.85[115] 2.29[116] 9.35[117] 2.30[118] 0.42[119]
18 SCGB3A2 Secretoglobin family 3A member 2 [120] [121] [122] [123] -2.00[124] -1.95[125] [126]
19 SCARA5 Scavenger receptor class A member 5 [127] -0.37[128] [129] [130] 2.75[131] -0.57[132] 5.28[133]
[1]
ref_hepatocyte FTL
Mean 6.65e+03
Standard deviation 4e+03
Values 5.1e+03 3.5e+03 2.9e+03 1.1e+04 1.1e+04
[2]
HepG2 FTL
Mean 3.12e+03
Standard deviation 7.3e+02
Values 3.6e+03 2.6e+03
[3]
HepG2.C3A FTL
Mean 2.09e+03
Standard deviation 7.1e+02
Values 1.6e+03 2.6e+03
[4]
HuH.7 FTL
Mean 1.61e+03
Standard deviation 1.7e+02
Values 1.7e+03 1.4e+03 1.7e+03
[5]
SNU475 FTL
Mean 4.59e+03
Standard deviation 6.3e+02
Values 5e+03 4.1e+03
[6]
THLE FTL
Mean 1.02e+03
Standard deviation 75
Values 9.6e+02 1.1e+03
[7]
liver FTL
Mean 3.93e+03
Standard deviation 4.2e+03
Values 5.7e+03 6.9e+02 9e+03 3.1e+02
[8]
ref_hepatocyte APOA1
Mean 5.54e+03
Standard deviation 5.9e+03
Values 4.7e+03 1.6e+02 9e+02 7.3e+03 1.5e+04
[9]
HepG2 APOA1
Mean 647
Standard deviation 1.1e+02
Values 5.7e+02 7.2e+02
[10]
HepG2.C3A APOA1
Mean 1.4e+03
Standard deviation 4.2e+02
Values 1.7e+03 1.1e+03
[11]
HuH.7 APOA1
Mean 217
Standard deviation 31
Values 1.8e+02 2.4e+02 2.3e+02
[12]
SNU475 APOA1
Mean 0.596
Standard deviation 0.16
Values 0.48 0.71
[13]
THLE APOA1
Mean 0.598
Standard deviation 0.26
Values 0.78 0.41
[14]
liver APOA1
Mean 3.55e+03
Standard deviation 3.2e+03
Values 6.9e+03 8.6e+02 5.7e+03 7.4e+02
[15]
ref_hepatocyte APOE
Mean 2.9e+03
Standard deviation 3.4e+03
Values 1.5e+03 1.5e+02 6.9e+02 3.7e+03 8.4e+03
[16]
HepG2 APOE
Mean 509
Standard deviation 94
Values 5.8e+02 4.4e+02
[17]
HepG2.C3A APOE
Mean 586
Standard deviation 2.5e+02
Values 7.7e+02 4.1e+02
[18]
HuH.7 APOE
Mean 555
Standard deviation 1.2e+02
Values 4.2e+02 6.6e+02 5.9e+02
[19]
SNU475 APOE
Mean 3.04
Standard deviation 1.2
Values 2.2 3.9
[20]
THLE APOE
Mean 5.77
Standard deviation 1.1
Values 6.5 5
[21]
liver APOE
Mean 1.15e+03
Standard deviation 6.4e+02
Values 2.1e+03 7.6e+02 1.1e+03 6.9e+02
[22]
ref_hepatocyte FTH1
Mean 1.21e+03
Standard deviation 6.1e+02
Values 7.4e+02 1.2e+03 2.3e+03 1e+03 8.3e+02
[23]
HepG2 FTH1
Mean 1.2e+03
Standard deviation 5.9e+02
Values 1.6e+03 7.9e+02
[24]
HepG2.C3A FTH1
Mean 484
Standard deviation 37
Values 4.6e+02 5.1e+02
[25]
HuH.7 FTH1
Mean 1.02e+03
Standard deviation 99
Values 9.1e+02 1.1e+03 1.1e+03
[26]
SNU475 FTH1
Mean 1.25e+03
Standard deviation 2.8e+02
Values 1.4e+03 1e+03
[27]
THLE FTH1
Mean 1.63e+03
Standard deviation 83
Values 1.6e+03 1.7e+03
[28]
liver FTH1
Mean 762
Standard deviation 8.1e+02
Values 1.6e+03 76 1.3e+03 72
[29]
ref_hepatocyte CALR
Mean 617
Standard deviation 2.8e+02
Values 7.7e+02 4.7e+02 3.5e+02 1e+03 4.6e+02
[30]
HepG2 CALR
Mean 698
Standard deviation 0.66
Values 7e+02 7e+02
[31]
HepG2.C3A CALR
Mean 448
Standard deviation 1.7e+02
Values 3.3e+02 5.7e+02
[32]
HuH.7 CALR
Mean 360
Standard deviation 34
Values 3.3e+02 3.5e+02 4e+02
[33]
SNU475 CALR
Mean 258
Standard deviation 1.5e+02
Values 3.6e+02 1.6e+02
[34]
THLE CALR
Mean 356
Standard deviation 52
Values 3.2e+02 3.9e+02
[35]
liver CALR
Mean 440
Standard deviation 89
Values 4e+02 3.7e+02 5.7e+02 4.2e+02
[36]
ref_hepatocyte HSP90B1
Mean 367
Standard deviation 3.6e+02
Values 3.1e+02 1.4e+02 1.2e+02 9.9e+02 2.8e+02
[37]
HepG2 HSP90B1
Mean 332
Standard deviation 69
Values 2.8e+02 3.8e+02
[38]
HepG2.C3A HSP90B1
Mean 925
Standard deviation 72
Values 8.7e+02 9.8e+02
[39]
HuH.7 HSP90B1
Mean 428
Standard deviation 74
Values 3.7e+02 5.1e+02 4e+02
[40]
SNU475 HSP90B1
Mean 369
Standard deviation 1.2e+02
Values 4.5e+02 2.9e+02
[41]
THLE HSP90B1
Mean 393
Standard deviation 13
Values 3.8e+02 4e+02
[42]
liver HSP90B1
Mean 511
Standard deviation 1.5e+02
Values 4e+02 6e+02 6.8e+02 3.6e+02
[43]
ref_hepatocyte APOB
Mean 165
Standard deviation 1.5e+02
Values 2.4e+02 15 8.3 2.2e+02 3.4e+02
[44]
HepG2 APOB
Mean 1.41e+03
Standard deviation 6.5e+02
Values 9.5e+02 1.9e+03
[45]
HepG2.C3A APOB
Mean 2.13e+03
Standard deviation 5.8e+02
Values 1.7e+03 2.5e+03
[46]
HuH.7 APOB
Mean 1.16e+03
Standard deviation 4.8e+02
Values 1.4e+03 1.5e+03 6.1e+02
[47]
SNU475 APOB
Mean 1.75
Standard deviation 0.12
Values 1.7 1.8
[48]
THLE APOB
Mean 2.04
Standard deviation 0.96
Values 2.7 1.4
[49]
liver APOB
Mean 6.85e+03
Standard deviation 4.5e+03
Values 2.9e+03 1.2e+04 3.6e+03 8.5e+03
[50]
ref_hepatocyte MARCO
Mean 11.5
Standard deviation 14
Values 0 0.26 4.6 24 29
[51]
HepG2 MARCO
Mean 0.043
Standard deviation 0.061
Values 0.086 0
[52]
HepG2.C3A MARCO
Mean 0
Standard deviation 0
Values 0 0
[53]
HuH.7 MARCO
Mean 0.0836
Standard deviation 0.026
Values 0.057 0.11 0.084
[54]
SNU475 MARCO
Mean 0.216
Standard deviation 0.089
Values 0.15 0.28
[55]
THLE MARCO
Mean 0.089
Standard deviation 0.017
Values 0.077 0.1
[56]
liver MARCO
Mean 19.8
Standard deviation 8.4
Values 14 21 31 13
[57]
ref_hepatocyte MASP1
Mean 6.74
Standard deviation 5.9
Values 5.7 0.83 1.3 13 13
[58]
HepG2 MASP1
Mean 18.6
Standard deviation 5.7
Values 23 15
[59]
HepG2.C3A MASP1
Mean 30.4
Standard deviation 20
Values 45 16
[60]
HuH.7 MASP1
Mean 114
Standard deviation 9.8
Values 1.2e+02 1.2e+02 1e+02
[61]
SNU475 MASP1
Mean 0.139
Standard deviation 0.026
Values 0.12 0.16
[62]
THLE MASP1
Mean 0.138
Standard deviation 0.014
Values 0.15 0.13
[63]
liver MASP1
Mean 73.3
Standard deviation 18
Values 92 73 79 49
[64]
ref_hepatocyte COLEC11
Mean 1.27
Standard deviation 1.4
Values 1.7 0 0.42 3.4 0.83
[65]
HepG2 COLEC11
Mean 1.04
Standard deviation 0.19
Values 1.2 0.91
[66]
HepG2.C3A COLEC11
Mean 1.14
Standard deviation 0.11
Values 1.2 1.1
[67]
HuH.7 COLEC11
Mean 0.733
Standard deviation 0.19
Values 0.52 0.89 0.8
[68]
SNU475 COLEC11
Mean 0.065
Standard deviation 0.066
Values 0.019 0.11
[69]
THLE COLEC11
Mean 0.123
Standard deviation 0.0013
Values 0.12 0.12
[70]
liver COLEC11
Mean 31
Standard deviation 23
Values 57 11 42 13
[71]
ref_hepatocyte MSR1
Mean 0.749
Standard deviation 0.63
Values 0 0.35 0.58 1.3 1.5
[72]
HepG2 MSR1
Mean 0.00287
Standard deviation 0.0041
Values 0.0057 0
[73]
HepG2.C3A MSR1
Mean 0
Standard deviation 0
Values 0 0
[74]
HuH.7 MSR1
Mean 0.134
Standard deviation 0.039
Values 0.17 0.13 0.094
[75]
SNU475 MSR1
Mean 2.16
Standard deviation 0.05
Values 2.1 2.2
[76]
THLE MSR1
Mean 0
Standard deviation 0
Values 0 0
[77]
liver MSR1
Mean 7.51
Standard deviation 3.5
Values 5.4 13 5 6.9
[78]
ref_hepatocyte COL4A2
Mean 0.513
Standard deviation 0.39
Values 0 0.18 0.81 0.78 0.8
[79]
HepG2 COL4A2
Mean 1.08
Standard deviation 0.47
Values 1.4 0.75
[80]
HepG2.C3A COL4A2
Mean 1.2
Standard deviation 0.062
Values 1.2 1.2
[81]
HuH.7 COL4A2
Mean 0.178
Standard deviation 0.11
Values 0.25 0.23 0.056
[82]
SNU475 COL4A2
Mean 137
Standard deviation 66
Values 1.8e+02 90
[83]
THLE COL4A2
Mean 144
Standard deviation 70
Values 94 1.9e+02
[84]
liver COL4A2
Mean 26
Standard deviation 16
Values 6.2 43 20 35
[85]
ref_hepatocyte COL3A1
Mean 0.41
Standard deviation 0.47
Values 0.042 0.065 0.2 0.59 1.2
[86]
HepG2 COL3A1
Mean 0.454
Standard deviation 0.48
Values 0.8 0.11
[87]
HepG2.C3A COL3A1
Mean 0.133
Standard deviation 0.024
Values 0.12 0.15
[88]
HuH.7 COL3A1
Mean 0.67
Standard deviation 0.46
Values 0.93 0.94 0.14
[89]
SNU475 COL3A1
Mean 748
Standard deviation 4.9e+02
Values 1.1e+03 4e+02
[90]
THLE COL3A1
Mean 244
Standard deviation 45
Values 2.1e+02 2.8e+02
[91]
liver COL3A1
Mean 113
Standard deviation 42
Values 54 1.4e+02 1.5e+02 1.2e+02
[92]
ref_hepatocyte COL1A1
Mean 0.396
Standard deviation 0.34
Values 0.021 0.18 0.62 0.31 0.85
[93]
HepG2 COL1A1
Mean 23.3
Standard deviation 12
Values 15 32
[94]
HepG2.C3A COL1A1
Mean 0.114
Standard deviation 0.051
Values 0.078 0.15
[95]
HuH.7 COL1A1
Mean 0.386
Standard deviation 0.18
Values 0.55 0.41 0.2
[96]
SNU475 COL1A1
Mean 93.4
Standard deviation 25
Values 76 1.1e+02
[97]
THLE COL1A1
Mean 304
Standard deviation 1.2e+02
Values 2.2e+02 3.9e+02
[98]
liver COL1A1
Mean 46
Standard deviation 44
Values 24 30 1.1e+02 19
[99]
ref_hepatocyte COL1A2
Mean 0.368
Standard deviation 0.45
Values 0 0.065 0.43 0.23 1.1
[100]
HepG2 COL1A2
Mean 0.0114
Standard deviation 0.0081
Values 0.0057 0.017
[101]
HepG2.C3A COL1A2
Mean 0.0107
Standard deviation 0.015
Values 0 0.021
[102]
HuH.7 COL1A2
Mean 0.0577
Standard deviation 0.036
Values 0.09 0.064 0.019
[103]
SNU475 COL1A2
Mean 21.3
Standard deviation 0.8
Values 21 22
[104]
THLE COL1A2
Mean 24.5
Standard deviation 0.21
Values 25 24
[105]
liver COL1A2
Mean 44.8
Standard deviation 24
Values 20 51 76 32
[106]
ref_hepatocyte COL4A1
Mean 0.353
Standard deviation 0.31
Values 0 0.11 0.76 0.43 0.46
[107]
HepG2 COL4A1
Mean 0.117
Standard deviation 0.069
Values 0.17 0.069
[108]
HepG2.C3A COL4A1
Mean 0.0526
Standard deviation 0.047
Values 0.019 0.086
[109]
HuH.7 COL4A1
Mean 0.129
Standard deviation 0.08
Values 0.19 0.16 0.037
[110]
SNU475 COL4A1
Mean 108
Standard deviation 58
Values 1.5e+02 67
[111]
THLE COL4A1
Mean 104
Standard deviation 59
Values 62 1.5e+02
[112]
liver COL4A1
Mean 33.7
Standard deviation 21
Values 8.2 58 32 36
[113]
ref_hepatocyte COLEC12
Mean 0.167
Standard deviation 0.25
Values 0.6 0.036 0 0.17 0.024
[114]
HepG2 COLEC12
Mean 0.42
Standard deviation 0.34
Values 0.66 0.18
[115]
HepG2.C3A COLEC12
Mean 0.00536
Standard deviation 0.0076
Values 0 0.011
[116]
HuH.7 COLEC12
Mean 0.256
Standard deviation 0.2
Values 0.15 0.49 0.13
[117]
SNU475 COLEC12
Mean 47.5
Standard deviation 11
Values 55 40
[118]
THLE COLEC12
Mean 0.199
Standard deviation 0.07
Values 0.25 0.15
[119]
liver COLEC12
Mean 0.224
Standard deviation 0.12
Values 0.071 0.34 0.18 0.3
[120]
ref_hepatocyte SCGB3A2
Mean 0.0424
Standard deviation 0.095
Values 0 0 0.21 0 0
[121]
HepG2 SCGB3A2
Mean 0
Standard deviation 0
Values 0 0
[122]
HepG2.C3A SCGB3A2
Mean 0
Standard deviation 0
Values 0 0
[123]
HuH.7 SCGB3A2
Mean 0
Standard deviation 0
Values 0 0 0
[124]
SNU475 SCGB3A2
Mean 0.00464
Standard deviation 0.0066
Values 0.0093 0
[125]
THLE SCGB3A2
Mean 0.00266
Standard deviation 0.0038
Values 0 0.0053
[126]
liver SCGB3A2
Mean 0
Standard deviation 0
Values 0 0 0 0
[127]
ref_hepatocyte SCARA5
Mean 0.0163
Standard deviation 0.036
Values 0 0 0 0 0.081
[128]
HepG2 SCARA5
Mean 0.00573
Standard deviation 0.0081
Values 0.011 0
[129]
HepG2.C3A SCARA5
Mean 0
Standard deviation 0
Values 0 0
[130]
HuH.7 SCARA5
Mean 0
Standard deviation 0
Values 0 0 0
[131]
SNU475 SCARA5
Mean 0.0477
Standard deviation 0.054
Values 0.0093 0.086
[132]
THLE SCARA5
Mean 0.00266
Standard deviation 0.0038
Values 0 0.0053
[133]
liver SCARA5
Mean 0.637
Standard deviation 0.21
Values 0.78 0.51 0.41 0.85