REACTOME_RNA_POLYMERASE_II_TRANSCRIBES_SNRNA_GENES |
Return to index |
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Order |
Gene |
Description |
ref_hepatocyte |
HepG2 |
HepG2.C3A |
HuH.7 |
SNU475 |
THLE |
liver |
1 |
POLR2L |
DNA-directed RNA polymerases I, II, and III subunit RPABC5 |
[1] |
-2.28[2] |
-2.50[3] |
-2.85[4] |
-1.97[5] |
-2.15[6] |
-1.01[7] |
2 |
SSU72 |
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 |
[8] |
-0.92[9] |
-1.30[10] |
-1.31[11] |
-0.98[12] |
-1.38[13] |
-1.59[14] |
3 |
TAF9 |
Transcription initiation factor TFIID subunit 9 |
[15] |
-0.92[16] |
-0.37[17] |
-0.95[18] |
-1.02[19] |
-0.89[20] |
-0.83[21] |
4 |
POLR2J |
DNA-directed RNA polymerase II subunit RPB11-a |
[22] |
-2.98[23] |
-2.90[24] |
-2.73[25] |
-3.20[26] |
-2.99[27] |
-2.75[28] |
5 |
ELL2 |
RNA polymerase II elongation factor ELL2 |
[29] |
-0.28[30] |
0.94[31] |
-0.28[32] |
-0.16[33] |
-0.08[34] |
0.70[35] |
6 |
POLR2E |
DNA-directed RNA polymerases I, II, and III subunit RPABC1 |
[36] |
0.80[37] |
0.54[38] |
0.52[39] |
-0.34[40] |
0.41[41] |
0.81[42] |
7 |
POLR2H |
DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
[43] |
-1.38[44] |
-0.97[45] |
-1.10[46] |
-2.45[47] |
-1.88[48] |
-1.62[49] |
8 |
TAF13 |
Transcription initiation factor TFIID subunit 13 |
[50] |
-3.07[51] |
-3.40[52] |
-4.44[53] |
-2.51[54] |
-2.73[55] |
-3.90[56] |
9 |
POLR2F |
DNA-directed RNA polymerases I, II, and III subunit RPABC2 |
[57] |
-1.08[58] |
-1.05[59] |
-1.97[60] |
-2.38[61] |
-1.75[62] |
-0.74[63] |
10 |
POLR2K |
DNA-directed RNA polymerases I, II, and III subunit RPABC4 |
[64] |
-1.40[65] |
-0.76[66] |
-0.97[67] |
-0.73[68] |
-0.94[69] |
-0.94[70] |
11 |
POLR2G |
DNA-directed RNA polymerase II subunit RPB7 |
[71] |
-0.97[72] |
-0.90[73] |
-1.52[74] |
-0.93[75] |
-1.17[76] |
-1.49[77] |
12 |
SUPT5H |
Transcription elongation factor SPT5 |
[78] |
0.48[79] |
-0.04[80] |
0.82[81] |
0.67[82] |
0.38[83] |
-0.01[84] |
13 |
GTF2F2 |
General transcription factor IIF subunit 2 |
[85] |
-1.75[86] |
-1.33[87] |
-1.12[88] |
-1.90[89] |
-1.78[90] |
-2.25[91] |
14 |
SUPT4H1 |
Transcription elongation factor SPT4 |
[92] |
-0.05[93] |
-0.17[94] |
-0.70[95] |
-1.42[96] |
-0.94[97] |
-1.49[98] |
15 |
NCBP2 |
Nuclear cap-binding protein subunit 2 |
[99] |
-0.28[100] |
-0.02[101] |
-0.05[102] |
-0.65[103] |
-0.50[104] |
-1.01[105] |
16 |
POLR2C |
DNA-directed RNA polymerase II subunit RPB3 |
[106] |
1.01[107] |
0.91[108] |
0.30[109] |
-0.01[110] |
0.10[111] |
-0.12[112] |
17 |
GTF2E2 |
Transcription initiation factor IIE subunit beta |
[113] |
-0.27[114] |
-0.67[115] |
-0.38[116] |
-0.67[117] |
-1.07[118] |
-1.07[119] |
18 |
INTS10 |
Integrator complex subunit 10 |
[120] |
-0.25[121] |
0.46[122] |
0.00[123] |
-1.06[124] |
-0.58[125] |
0.86[126] |
19 |
SRRT |
Serrate RNA effector molecule homolog |
[127] |
0.61[128] |
0.33[129] |
0.32[130] |
0.44[131] |
0.52[132] |
0.04[133] |
20 |
POLR2I |
DNA-directed RNA polymerase II subunit RPB9 |
[134] |
-1.40[135] |
-1.48[136] |
-1.67[137] |
-2.05[138] |
-2.08[139] |
-0.70[140] |
21 |
GTF2F1 |
General transcription factor IIF subunit 1 |
[141] |
0.58[142] |
-0.04[143] |
1.32[144] |
-0.17[145] |
0.22[146] |
-0.94[147] |
22 |
TAF11 |
Transcription initiation factor TFIID subunit 11 |
[148] |
-0.40[149] |
-0.33[150] |
-1.16[151] |
-0.04[152] |
-0.74[153] |
-1.60[154] |
23 |
GTF2A2 |
Transcription initiation factor IIA subunit 2 |
[155] |
-0.26[156] |
-0.51[157] |
-0.97[158] |
0.26[159] |
0.44[160] |
-0.52[161] |
24 |
RPRD1B |
Regulation of nuclear pre-mRNA domain-containing protein 1B |
[162] |
0.43[163] |
0.55[164] |
-0.35[165] |
0.32[166] |
-0.28[167] |
0.59[168] |
25 |
CDK9 |
Cyclin-dependent kinase 9 |
[169] |
-0.18[170] |
-0.76[171] |
-0.79[172] |
0.07[173] |
-0.34[174] |
0.48[175] |
26 |
CDK7 |
Cyclin-dependent kinase 7 |
[176] |
-0.46[177] |
0.35[178] |
-0.04[179] |
-0.34[180] |
-0.78[181] |
-2.02[182] |
27 |
GTF2B |
Transcription initiation factor IIB |
[183] |
-0.89[184] |
-0.64[185] |
-0.77[186] |
-0.80[187] |
-0.86[188] |
-0.53[189] |
28 |
CCNK |
Cyclin-K |
[190] |
0.34[191] |
-0.83[192] |
-0.75[193] |
0.63[194] |
0.00[195] |
-1.72[196] |
29 |
POLR2B |
DNA-directed RNA polymerase II subunit RPB2 |
[197] |
1.41[198] |
1.58[199] |
1.41[200] |
1.33[201] |
1.92[202] |
1.28[203] |
30 |
POLR2D |
DNA-directed RNA polymerase II subunit RPB4 |
[204] |
0.44[205] |
0.37[206] |
-0.45[207] |
-0.18[208] |
-0.07[209] |
-0.11[210] |
31 |
SNAPC5 |
snRNA-activating protein complex subunit 5 |
[211] |
-2.33[212] |
-2.75[213] |
-2.50[214] |
-2.33[215] |
-2.73[216] |
-2.43[217] |
32 |
POLR2A |
DNA-directed RNA polymerase II subunit RPB1 |
[218] |
2.92[219] |
1.25[220] |
2.14[221] |
2.38[222] |
2.65[223] |
2.12[224] |
33 |
PHAX |
Phosphorylated adapter RNA export protein |
[225] |
0.05[226] |
0.14[227] |
0.37[228] |
0.93[229] |
1.12[230] |
0.82[231] |
34 |
INTS12 |
Integrator complex subunit 12 |
[232] |
-0.86[233] |
-0.63[234] |
-0.78[235] |
-0.45[236] |
-0.06[237] |
-0.16[238] |
35 |
TBP |
TATA-box-binding protein |
[239] |
-0.04[240] |
0.05[241] |
-1.24[242] |
-0.86[243] |
-0.18[244] |
-0.74[245] |
36 |
TAF6 |
Transcription initiation factor TFIID subunit 6 |
[246] |
1.14[247] |
0.49[248] |
0.90[249] |
1.04[250] |
1.30[251] |
0.18[252] |
37 |
NCBP1 |
Nuclear cap-binding protein subunit 1 |
[253] |
1.44[254] |
1.46[255] |
1.16[256] |
1.98[257] |
2.41[258] |
1.57[259] |
38 |
INTS3 |
Integrator complex subunit 3 |
[260] |
1.03[261] |
0.93[262] |
2.06[263] |
1.94[264] |
1.64[265] |
1.77[266] |
39 |
RPRD1A |
Regulation of nuclear pre-mRNA domain-containing protein 1A |
[267] |
1.72[268] |
2.40[269] |
2.73[270] |
0.76[271] |
2.30[272] |
1.71[273] |
40 |
GTF2E1 |
General transcription factor IIE subunit 1 |
[274] |
0.14[275] |
0.07[276] |
0.05[277] |
0.58[278] |
-0.36[279] |
-0.32[280] |
41 |
INTS1 |
Integrator complex subunit 1 |
[281] |
2.73[282] |
1.57[283] |
2.98[284] |
2.14[285] |
2.41[286] |
2.45[287] |
42 |
ZC3H8 |
Zinc finger CCCH domain-containing protein 8 |
[288] |
-1.36[289] |
-0.57[290] |
-1.15[291] |
-1.18[292] |
-1.07[293] |
-1.46[294] |
43 |
INTS8 |
Integrator complex subunit 8 |
[295] |
0.64[296] |
0.96[297] |
1.91[298] |
2.31[299] |
1.37[300] |
1.23[301] |
44 |
INTS6 |
Integrator complex subunit 6 |
[302] |
1.03[303] |
1.65[304] |
1.81[305] |
1.58[306] |
1.15[307] |
2.82[308] |
45 |
PCF11 |
Pre-mRNA cleavage complex 2 protein Pcf11 |
[309] |
0.28[310] |
1.56[311] |
1.37[312] |
1.28[313] |
0.82[314] |
2.17[315] |
46 |
SNAPC2 |
snRNA-activating protein complex subunit 2 |
[316] |
0.29[317] |
0.33[318] |
0.35[319] |
-0.27[320] |
0.75[321] |
-1.58[322] |
47 |
GTF2A1 |
Transcription initiation factor IIA subunit 1 |
[323] |
0.69[324] |
1.39[325] |
1.64[326] |
2.44[327] |
1.72[328] |
1.58[329] |
48 |
SP1 |
Transcription factor Sp1 |
[330] |
2.01[331] |
2.04[332] |
3.00[333] |
2.90[334] |
2.46[335] |
2.48[336] |
49 |
SNAPC1 |
snRNA-activating protein complex subunit 1 |
[337] |
-0.73[338] |
-0.49[339] |
-0.54[340] |
1.35[341] |
2.01[342] |
-0.83[343] |
50 |
INTS5 |
Integrator complex subunit 5 |
[344] |
0.86[345] |
0.48[346] |
1.12[347] |
0.82[348] |
1.24[349] |
1.59[350] |
51 |
CCNT1 |
Cyclin-T1 |
[351] |
1.22[352] |
1.97[353] |
1.81[354] |
2.14[355] |
1.99[356] |
1.95[357] |
52 |
ELL3 |
RNA polymerase II elongation factor ELL3 |
[358] |
-0.48[359] |
-0.15[360] |
-1.40[361] |
-1.24[362] |
-1.81[363] |
-1.69[364] |
53 |
INTS4 |
Integrator complex subunit 4 |
[365] |
0.76[366] |
0.46[367] |
0.43[368] |
0.83[369] |
0.26[370] |
0.85[371] |
54 |
SNAPC3 |
snRNA-activating protein complex subunit 3 |
[372] |
0.68[373] |
0.64[374] |
0.46[375] |
0.80[376] |
1.02[377] |
1.28[378] |
55 |
ZNF143 |
Zinc finger protein 143 |
[379] |
0.21[380] |
0.45[381] |
0.99[382] |
0.79[383] |
0.06[384] |
0.55[385] |
56 |
INTS7 |
Integrator complex subunit 7 |
[386] |
1.38[387] |
1.29[388] |
1.26[389] |
2.56[390] |
1.73[391] |
1.59[392] |
57 |
ELL |
RNA polymerase II elongation factor ELL |
[393] |
1.07[394] |
1.03[395] |
1.14[396] |
0.39[397] |
1.10[398] |
0.81[399] |
58 |
SNAPC4 |
snRNA-activating protein complex subunit 4 |
[400] |
1.65[401] |
1.22[402] |
1.12[403] |
0.71[404] |
1.36[405] |
0.37[406] |
59 |
CCNT2 |
Cyclin-T2 |
[407] |
1.46[408] |
3.09[409] |
2.46[410] |
2.68[411] |
2.16[412] |
3.23[413] |
60 |
TAF8 |
Transcription initiation factor TFIID subunit 8 |
[414] |
1.63[415] |
1.28[416] |
0.32[417] |
1.46[418] |
1.54[419] |
1.30[420] |
61 |
RPRD2 |
Regulation of nuclear pre-mRNA domain-containing protein 2 |
[421] |
1.89[422] |
1.47[423] |
2.01[424] |
2.22[425] |
2.49[426] |
2.27[427] |
62 |
INTS2 |
Integrator complex subunit 2 |
[428] |
1.77[429] |
2.23[430] |
1.67[431] |
1.92[432] |
0.92[433] |
1.64[434] |
63 |
RPAP2 |
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 |
[435] |
0.31[436] |
1.08[437] |
0.41[438] |
1.43[439] |
0.90[440] |
1.57[441] |
64 |
INTS9 |
Integrator complex subunit 9 |
[442] |
1.64[443] |
1.45[444] |
1.29[445] |
0.41[446] |
0.82[447] |
0.67[448] |
65 |
TAF5 |
Transcription initiation factor TFIID subunit 5 |
[449] |
0.42[450] |
1.24[451] |
2.53[452] |
0.12[453] |
1.31[454] |
0.74[455] |
66 |
POU2F1 |
POU domain, class 2, transcription factor 1 |
[456] |
3.29[457] |
3.88[458] |
4.50[459] |
4.35[460] |
3.30[461] |
4.44[462] |
67 |
POU2F2 |
POU domain, class 2, transcription factor 2 |
[463] |
1.91[464] |
1.25[465] |
1.70[466] |
2.22[467] |
4.49[468] |
3.67[469] |
68 |
ICE2 |
Little elongation complex subunit 2 |
[470] |
[471] |
[472] |
[473] |
[474] |
[475] |
[476] |
69 |
RNU4-1 |
|
[477] |
[478] |
[479] |
[480] |
[481] |
[482] |
[483] |
70 |
RNU2-1 |
|
[484] |
[485] |
[486] |
[487] |
[488] |
[489] |
[490] |
71 |
RNU5A-1 |
|
[491] |
[492] |
[493] |
[494] |
[495] |
[496] |
[497] |
72 |
INTS13 |
Integrator complex subunit 13 |
[498] |
[499] |
[500] |
[501] |
[502] |
[503] |
[504] |
73 |
RNU11 |
|
[505] |
[506] |
[507] |
[508] |
[509] |
[510] |
[511] |
74 |
NABP2 |
SOSS complex subunit B1 |
[512] |
[513] |
[514] |
[515] |
[516] |
[517] |
[518] |
75 |
ICE1 |
Little elongation complex subunit 1 |
[519] |
[520] |
[521] |
[522] |
[523] |
[524] |
[525] |
76 |
RNU4ATAC |
[526] |
[527] |
[528] |
[529] |
[530] |
[531] |
[532] |
77 |
RNU12 |
|
[533] |
[534] |
[535] |
[536] |
[537] |
[538] |
[539] |
78 |
NABP1 |
SOSS complex subunit B2 |
[540] |
[541] |
[542] |
[543] |
[544] |
[545] |
[546] |
79 |
RNU1-1 |
|
[547] |
[548] |
[549] |
[550] |
[551] |
[552] |
[553] |
80 |
INTS14 |
Integrator complex subunit 14 |
[554] |
[555] |
[556] |
[557] |
[558] |
[559] |
[560] |
81 |
INTS11 |
Integrator complex subunit 11 |
[561] |
[562] |
[563] |
[564] |
[565] |
[566] |
[567] |
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