REACTOME_PROCESSING_OF_INTRONLESS_PRE_MRNAS Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 NCBP2 Nuclear cap-binding protein subunit 2 [1] -1.13[2] -1.07[3] -1.12[4] -1.67[5] -1.42[6] -1.59[7]
2 PAPOLA Poly(A) polymerase alpha [8] -0.01[9] 0.64[10] 0.52[11] 0.81[12] 0.51[13] 0.66[14]
3 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 [15] 0.79[16] 1.11[17] 0.61[18] 0.33[19] 0.70[20] -0.15[21]
4 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 [22] -1.40[23] -1.50[24] -1.50[25] -0.73[26] -0.97[27] -1.12[28]
5 PABPN1 Polyadenylate-binding protein 2 [29] -1.16[30] -1.83[31] -1.85[32] -2.52[33] -2.33[34] -3.53[35]
6 CSTF3 Cleavage stimulation factor subunit 3 [36] -0.89[37] -0.36[38] -0.52[39] -1.21[40] -1.36[41] -0.74[42]
7 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 [43] -0.44[44] -0.41[45] -0.70[46] -0.13[47] -0.54[48] -0.68[49]
8 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 [50] 0.07[51] -0.12[52] 0.25[53] 0.22[54] 0.43[55] 0.13[56]
9 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 [57] -0.13[58] 0.03[59] -0.12[60] 0.74[61] 0.73[62] 0.67[63]
10 CSTF1 Cleavage stimulation factor subunit 1 [64] 0.30[65] -0.26[66] -0.81[67] -0.19[68] -0.80[69] -0.24[70]
11 SYMPK Symplekin [71] 1.00[72] 0.35[73] 1.25[74] 0.12[75] 0.64[76] 0.13[77]
12 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 [78] -0.14[79] -0.77[80] -0.73[81] -1.02[82] -1.07[83] -1.85[84]
13 WDR33 pre-mRNA 3' end processing protein WDR33 [85] 1.02[86] 0.95[87] 0.64[88] 0.42[89] 0.46[90] 1.53[91]
14 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 [92] 1.29[93] 0.95[94] 1.25[95] 0.56[96] 0.06[97] 0.72[98]
15 NCBP1 Nuclear cap-binding protein subunit 1 [99] 0.59[100] 0.41[101] 0.09[102] 0.96[103] 1.49[104] 0.99[105]
16 CSTF2 Cleavage stimulation factor subunit 2 [106] 0.08[107] -0.78[108] -0.43[109] 0.24[110] 0.09[111] -0.96[112]
17 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 [113] -0.57[114] 0.51[115] 0.30[116] 0.25[117] -0.09[118] 1.58[119]
18 CLP1 Polyribonucleotide 5'-hydroxyl-kinase Clp1 [120] -0.05[121] -0.90[122] 0.50[123] -0.88[124] -0.62[125] -0.60[126]
19 CSTF2T Cleavage stimulation factor subunit 2 tau variant [127] -0.77[128] -4.76[129] -0.27[130] 0.91[131] 1.06[132] 0.50[133]
[1]
ref_hepatocyte NCBP2
Mean 21.2
Standard deviation 13
Values 41 29 15 11 11
[2]
HepG2 NCBP2
Mean 33.8
Standard deviation 0.93
Values 33 34
[3]
HepG2.C3A NCBP2
Mean 41.6
Standard deviation 4.5
Values 45 38
[4]
HuH.7 NCBP2
Mean 42.1
Standard deviation 12
Values 45 29 53
[5]
SNU475 NCBP2
Mean 21.2
Standard deviation 3.1
Values 23 19
[6]
THLE NCBP2
Mean 28.5
Standard deviation 2.5
Values 27 30
[7]
liver NCBP2
Mean 11.9
Standard deviation 5.9
Values 15 7.7 19 6.3
[8]
ref_hepatocyte PAPOLA
Mean 20.6
Standard deviation 5.5
Values 29 24 16 18 17
[9]
HepG2 PAPOLA
Mean 71.9
Standard deviation 29
Values 51 92
[10]
HepG2.C3A PAPOLA
Mean 132
Standard deviation 18
Values 1.2e+02 1.4e+02
[11]
HuH.7 PAPOLA
Mean 128
Standard deviation 11
Values 1.4e+02 1.3e+02 1.2e+02
[12]
SNU475 PAPOLA
Mean 115
Standard deviation 5.5
Values 1.1e+02 1.2e+02
[13]
THLE PAPOLA
Mean 106
Standard deviation 10
Values 1.1e+02 99
[14]
liver PAPOLA
Mean 55.2
Standard deviation 6.2
Values 61 60 49 50
[15]
ref_hepatocyte NUDT21
Mean 11.5
Standard deviation 7.9
Values 25 12 8.5 5 6.9
[16]
HepG2 NUDT21
Mean 69.5
Standard deviation 24
Values 53 86
[17]
HepG2.C3A NUDT21
Mean 102
Standard deviation 23
Values 86 1.2e+02
[18]
HuH.7 NUDT21
Mean 76.1
Standard deviation 19
Values 88 54 87
[19]
SNU475 NUDT21
Mean 46.3
Standard deviation 1.2
Values 47 45
[20]
THLE NUDT21
Mean 67.5
Standard deviation 1.3
Values 67 68
[21]
liver NUDT21
Mean 17.6
Standard deviation 2.1
Values 16 19 20 16
[22]
ref_hepatocyte FIP1L1
Mean 10.9
Standard deviation 7.6
Values 11 11 23 6.3 2.8
[23]
HepG2 FIP1L1
Mean 14.4
Standard deviation 1.5
Values 13 15
[24]
HepG2.C3A FIP1L1
Mean 15.9
Standard deviation 1.3
Values 15 17
[25]
HuH.7 FIP1L1
Mean 16.7
Standard deviation 1.9
Values 18 15 18
[26]
SNU475 FIP1L1
Mean 20.9
Standard deviation 2
Values 20 22
[27]
THLE FIP1L1
Mean 20.1
Standard deviation 2
Values 19 22
[28]
liver FIP1L1
Mean 8.49
Standard deviation 1.1
Values 8.8 9.6 8.6 6.9
[29]
ref_hepatocyte PABPN1
Mean 10.3
Standard deviation 7.2
Values 23 7.7 8.6 5.8 6.4
[30]
HepG2 PABPN1
Mean 16.2
Standard deviation 1.5
Values 17 15
[31]
HepG2.C3A PABPN1
Mean 12
Standard deviation 1.5
Values 13 11
[32]
HuH.7 PABPN1
Mean 12.4
Standard deviation 1.9
Values 12 11 15
[33]
SNU475 PABPN1
Mean 5.76
Standard deviation 1.2
Values 6.6 4.9
[34]
THLE PABPN1
Mean 7.42
Standard deviation 0.6
Values 7 7.8
[35]
liver PABPN1
Mean 1.51
Standard deviation 0.53
Values 1.3 1.8 0.9 2.1
[36]
ref_hepatocyte CSTF3
Mean 10
Standard deviation 4.6
Values 13 16 9.2 6.4 5.3
[37]
HepG2 CSTF3
Mean 19
Standard deviation 6.2
Values 15 23
[38]
HepG2.C3A CSTF3
Mean 32
Standard deviation 4.8
Values 29 35
[39]
HuH.7 CSTF3
Mean 30.2
Standard deviation 9.8
Values 33 19 38
[40]
SNU475 CSTF3
Mean 13.8
Standard deviation 3.4
Values 11 16
[41]
THLE CSTF3
Mean 14.1
Standard deviation 2.2
Values 13 16
[42]
liver CSTF3
Mean 10.1
Standard deviation 6
Values 17 6.4 13 3.9
[43]
ref_hepatocyte CPSF3
Mean 9.09
Standard deviation 3.9
Values 15 8.6 9.5 6.9 5.2
[44]
HepG2 CPSF3
Mean 23.5
Standard deviation 4.1
Values 21 26
[45]
HepG2.C3A CPSF3
Mean 28.3
Standard deviation 3.8
Values 26 31
[46]
HuH.7 CPSF3
Mean 24.3
Standard deviation 6.3
Values 27 17 29
[47]
SNU475 CPSF3
Mean 26.6
Standard deviation 2.6
Values 28 25
[48]
THLE CPSF3
Mean 22.6
Standard deviation 3.2
Values 20 25
[49]
liver CPSF3
Mean 9.6
Standard deviation 2
Values 9.5 9.2 12 7.4
[50]
ref_hepatocyte CPSF7
Mean 9.06
Standard deviation 2.5
Values 11 6.6 12 7 8.3
[51]
HepG2 CPSF7
Mean 33.2
Standard deviation 3.6
Values 31 36
[52]
HepG2.C3A CPSF7
Mean 34.4
Standard deviation 1.7
Values 33 36
[53]
HuH.7 CPSF7
Mean 46.7
Standard deviation 9.6
Values 53 36 51
[54]
SNU475 CPSF7
Mean 33.6
Standard deviation 2.1
Values 32 35
[55]
THLE CPSF7
Mean 44
Standard deviation 0.59
Values 44 44
[56]
liver CPSF7
Mean 16.7
Standard deviation 6.5
Values 18 11 25 12
[57]
ref_hepatocyte CPSF2
Mean 7.3
Standard deviation 3.9
Values 7.8 13 8 3.8 3.7
[58]
HepG2 CPSF2
Mean 23.3
Standard deviation 11
Values 16 31
[59]
HepG2.C3A CPSF2
Mean 30.8
Standard deviation 9.5
Values 24 37
[60]
HuH.7 CPSF2
Mean 29
Standard deviation 5.9
Values 35 23 30
[61]
SNU475 CPSF2
Mean 39
Standard deviation 2.7
Values 41 37
[62]
THLE CPSF2
Mean 43.6
Standard deviation 1.2
Values 43 44
[63]
liver CPSF2
Mean 19.7
Standard deviation 7
Values 12 28 17 21
[64]
ref_hepatocyte CSTF1
Mean 7.19
Standard deviation 3.9
Values 14 3.5 7.9 5.9 5.1
[65]
HepG2 CSTF1
Mean 31.1
Standard deviation 7.5
Values 26 36
[66]
HepG2.C3A CSTF1
Mean 24.8
Standard deviation 4.6
Values 22 28
[67]
HuH.7 CSTF1
Mean 17.8
Standard deviation 2.3
Values 19 15 19
[68]
SNU475 CSTF1
Mean 20.1
Standard deviation 0.083
Values 20 20
[69]
THLE CSTF1
Mean 14.9
Standard deviation 0.42
Values 15 15
[70]
liver CSTF1
Mean 10.3
Standard deviation 1.8
Values 9.8 11 12 8.1
[71]
ref_hepatocyte SYMPK
Mean 6.81
Standard deviation 1.5
Values 5.1 6.1 6.9 9.1 6.9
[72]
HepG2 SYMPK
Mean 47.6
Standard deviation 13
Values 57 38
[73]
HepG2.C3A SYMPK
Mean 35.7
Standard deviation 4.7
Values 39 32
[74]
HuH.7 SYMPK
Mean 70.2
Standard deviation 17
Values 84 52 75
[75]
SNU475 SYMPK
Mean 23.6
Standard deviation 4.4
Values 27 20
[76]
THLE SYMPK
Mean 38.3
Standard deviation 2.8
Values 36 40
[77]
liver SYMPK
Mean 12.6
Standard deviation 6.1
Values 5.2 18 10 17
[78]
ref_hepatocyte CPSF4
Mean 6.62
Standard deviation 2
Values 9.7 6.4 5.7 6.9 4.4
[79]
HepG2 CPSF4
Mean 21
Standard deviation 3.6
Values 24 18
[80]
HepG2.C3A CPSF4
Mean 15.9
Standard deviation 1.8
Values 15 17
[81]
HuH.7 CPSF4
Mean 17.3
Standard deviation 5.1
Values 19 12 22
[82]
SNU475 CPSF4
Mean 10.4
Standard deviation 1.1
Values 9.6 11
[83]
THLE CPSF4
Mean 11.3
Standard deviation 1.2
Values 12 10
[84]
liver CPSF4
Mean 3.1
Standard deviation 0.9
Values 4.3 2.4 3.2 2.5
[85]
ref_hepatocyte WDR33
Mean 6
Standard deviation 2.3
Values 9.2 2.7 5.6 6.6 5.9
[86]
HepG2 WDR33
Mean 42.7
Standard deviation 5.3
Values 39 46
[87]
HepG2.C3A WDR33
Mean 47.8
Standard deviation 0.73
Values 48 47
[88]
HuH.7 WDR33
Mean 40.4
Standard deviation 3.6
Values 44 37 40
[89]
SNU475 WDR33
Mean 25.7
Standard deviation 0.26
Values 26 26
[90]
THLE WDR33
Mean 29.7
Standard deviation 2.7
Values 28 32
[91]
liver WDR33
Mean 29.3
Standard deviation 3.9
Values 32 28 24 33
[92]
ref_hepatocyte CPSF1
Mean 6
Standard deviation 1.4
Values 7.3 4.1 6 7.3 5.2
[93]
HepG2 CPSF1
Mean 51.4
Standard deviation 0.23
Values 51 52
[94]
HepG2.C3A CPSF1
Mean 47.7
Standard deviation 12
Values 56 39
[95]
HuH.7 CPSF1
Mean 61.8
Standard deviation 10
Values 72 52 61
[96]
SNU475 CPSF1
Mean 28.2
Standard deviation 4.8
Values 32 25
[97]
THLE CPSF1
Mean 22.6
Standard deviation 0.044
Values 23 23
[98]
liver CPSF1
Mean 16.7
Standard deviation 2.9
Values 15 18 14 20
[99]
ref_hepatocyte NCBP1
Mean 5.21
Standard deviation 2.7
Values 8.1 8.2 2.7 3.9 3.2
[100]
HepG2 NCBP1
Mean 27.5
Standard deviation 12
Values 19 36
[101]
HepG2.C3A NCBP1
Mean 28.5
Standard deviation 8.5
Values 23 35
[102]
HuH.7 NCBP1
Mean 24.1
Standard deviation 6.3
Values 30 17 25
[103]
SNU475 NCBP1
Mean 32.3
Standard deviation 2.4
Values 31 34
[104]
THLE NCBP1
Mean 52.8
Standard deviation 5
Values 49 56
[105]
liver NCBP1
Mean 17.5
Standard deviation 5.4
Values 11 24 15 19
[106]
ref_hepatocyte CSTF2
Mean 4.01
Standard deviation 2.1
Values 6.2 5.9 4.3 2.1 1.6
[107]
HepG2 CSTF2
Mean 14.8
Standard deviation 1.7
Values 14 16
[108]
HepG2.C3A CSTF2
Mean 9.63
Standard deviation 4.4
Values 6.5 13
[109]
HuH.7 CSTF2
Mean 12.9
Standard deviation 6.4
Values 17 5.6 16
[110]
SNU475 CSTF2
Mean 15.1
Standard deviation 2.5
Values 13 17
[111]
THLE CSTF2
Mean 15.4
Standard deviation 1.4
Values 14 16
[112]
liver CSTF2
Mean 3.48
Standard deviation 0.77
Values 3.5 3.8 4.3 2.4
[113]
ref_hepatocyte PCF11
Mean 3.71
Standard deviation 2.1
Values 5.8 4 5.6 1.5 1.6
[114]
HepG2 PCF11
Mean 8.73
Standard deviation 3.8
Values 6 11
[115]
HepG2.C3A PCF11
Mean 21.8
Standard deviation 1.7
Values 21 23
[116]
HuH.7 PCF11
Mean 19.8
Standard deviation 3.9
Values 20 24 16
[117]
SNU475 PCF11
Mean 14.1
Standard deviation 0.86
Values 15 14
[118]
THLE PCF11
Mean 12.5
Standard deviation 2.4
Values 14 11
[119]
liver PCF11
Mean 18.8
Standard deviation 9.5
Values 9.3 24 12 30
[120]
ref_hepatocyte CLP1
Mean 3.46
Standard deviation 1
Values 2.1 3.6 4.9 3.8 2.9
[121]
HepG2 CLP1
Mean 11.7
Standard deviation 0.32
Values 11 12
[122]
HepG2.C3A CLP1
Mean 7.65
Standard deviation 2.7
Values 5.7 9.6
[123]
HuH.7 CLP1
Mean 21.2
Standard deviation 4.5
Values 22 16 25
[124]
SNU475 CLP1
Mean 6.03
Standard deviation 0.43
Values 5.7 6.3
[125]
THLE CLP1
Mean 8.13
Standard deviation 0.84
Values 7.5 8.7
[126]
liver CLP1
Mean 3.87
Standard deviation 1.2
Values 4.6 2.7 5.1 3.1
[127]
ref_hepatocyte CSTF2T
Mean 3.46
Standard deviation 1.7
Values 1.8 6 2.4 3 4
[128]
HepG2 CSTF2T
Mean 7.09
Standard deviation 0.87
Values 6.5 7.7
[129]
HepG2.C3A CSTF2T
Mean 0.525
Standard deviation 0.15
Values 0.42 0.63
[130]
HuH.7 CSTF2T
Mean 12.4
Standard deviation 2.9
Values 14 9 14
[131]
SNU475 CSTF2T
Mean 20.7
Standard deviation 1.4
Values 20 22
[132]
THLE CSTF2T
Mean 25.9
Standard deviation 5.7
Values 22 30
[133]
liver CSTF2T
Mean 8.27
Standard deviation 3.1
Values 5.4 11 5.9 11