REACTOME_POLB_DEPENDENT_LONG_PATCH_BASE_EXCISION_REPAIR Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 APEX1 DNA-(apurinic or apyrimidinic site) lyase [1] -0.09[2] -0.25[3] -0.04[4] -0.75[5] -1.08[6] -0.72[7]
2 PARP1 Poly [ADP-ribose] polymerase 1 [8] -0.06[9] -0.11[10] -0.09[11] 0.59[12] 0.12[13] 0.54[14]
3 POLB DNA polymerase beta [15] -1.12[16] -0.88[17] -1.54[18] -2.23[19] -2.02[20] -0.55[21]
4 PARP2 Poly [ADP-ribose] polymerase 2 [22] -0.26[23] -0.44[24] -0.40[25] -0.22[26] 0.58[27] -0.52[28]
5 FEN1 Flap endonuclease 1 [29] 0.84[30] 0.82[31] 0.97[32] 0.74[33] 1.65[34] -0.14[35]
6 PARG Poly(ADP-ribose) glycohydrolase [36] -0.27[37] 0.96[38] -0.68[39] 0.82[40] 0.48[41] 1.41[42]
7 LIG1 DNA ligase 1 [43] 1.44[44] 1.66[45] 1.58[46] 0.57[47] 1.33[48] 0.59[49]
8 ADPRS [50] [51] [52] [53] [54] [55] [56]
[1]
ref_hepatocyte APEX1
Mean 47.5
Standard deviation 8.3
Values 54 48 56 42 37
[2]
HepG2 APEX1
Mean 112
Standard deviation 14
Values 1.2e+02 1e+02
[3]
HepG2.C3A APEX1
Mean 78.4
Standard deviation 5.9
Values 83 74
[4]
HuH.7 APEX1
Mean 142
Standard deviation 16
Values 1.4e+02 1.3e+02 1.6e+02
[5]
SNU475 APEX1
Mean 49.7
Standard deviation 2
Values 48 51
[6]
THLE APEX1
Mean 43.8
Standard deviation 9.3
Values 37 50
[7]
liver APEX1
Mean 21.1
Standard deviation 12
Values 32 12 31 9.4
[8]
ref_hepatocyte PARP1
Mean 36.6
Standard deviation 31
Values 26 91 33 17 16
[9]
HepG2 PARP1
Mean 88.3
Standard deviation 6.6
Values 84 93
[10]
HepG2.C3A PARP1
Mean 66.3
Standard deviation 14
Values 56 76
[11]
HuH.7 PARP1
Mean 106
Standard deviation 38
Values 1.3e+02 62 1.3e+02
[12]
SNU475 PARP1
Mean 96.8
Standard deviation 5.2
Values 1e+02 93
[13]
THLE PARP1
Mean 77.5
Standard deviation 13
Values 68 87
[14]
liver PARP1
Mean 39.1
Standard deviation 10
Values 31 44 51 31
[15]
ref_hepatocyte POLB
Mean 10.8
Standard deviation 1.8
Values 9.3 13 12 8.8 11
[16]
HepG2 POLB
Mean 12.5
Standard deviation 2.5
Values 11 14
[17]
HepG2.C3A POLB
Mean 11.5
Standard deviation 2.8
Values 9.5 13
[18]
HuH.7 POLB
Mean 11.5
Standard deviation 2.4
Values 10 10 14
[19]
SNU475 POLB
Mean 4.06
Standard deviation 0.015
Values 4.1 4.1
[20]
THLE POLB
Mean 5.21
Standard deviation 0.74
Values 5.7 4.7
[21]
liver POLB
Mean 5.42
Standard deviation 4
Values 7.1 2.8 10 1.5
[22]
ref_hepatocyte PARP2
Mean 9.38
Standard deviation 6.1
Values 15 17 5.5 4.8 4.6
[23]
HepG2 PARP2
Mean 19.7
Standard deviation 5.2
Values 16 23
[24]
HepG2.C3A PARP2
Mean 13.6
Standard deviation 4
Values 11 16
[25]
HuH.7 PARP2
Mean 22
Standard deviation 9.2
Values 24 12 30
[26]
SNU475 PARP2
Mean 14.2
Standard deviation 3.8
Values 12 17
[27]
THLE PARP2
Mean 27.3
Standard deviation 2.1
Values 29 26
[28]
liver PARP2
Mean 4.8
Standard deviation 3.1
Values 8 2.1 6.9 2.2
[29]
ref_hepatocyte FEN1
Mean 8.88
Standard deviation 4.9
Values 17 9.6 7.8 7 3.4
[30]
HepG2 FEN1
Mean 40
Standard deviation 13
Values 31 49
[31]
HepG2.C3A FEN1
Mean 30.8
Standard deviation 20
Values 17 45
[32]
HuH.7 FEN1
Mean 53.6
Standard deviation 31
Values 63 19 79
[33]
SNU475 FEN1
Mean 26.1
Standard deviation 5.2
Values 22 30
[34]
THLE FEN1
Mean 54.6
Standard deviation 11
Values 47 62
[35]
liver FEN1
Mean 5.91
Standard deviation 2.9
Values 3.7 5.8 10 4.1
[36]
ref_hepatocyte PARG
Mean 4.42
Standard deviation 2.1
Values 7 5.8 4.5 2.1 2.7
[37]
HepG2 PARG
Mean 9.22
Standard deviation 1.7
Values 8 10
[38]
HepG2.C3A PARG
Mean 16.8
Standard deviation 2.6
Values 15 19
[39]
HuH.7 PARG
Mean 8.52
Standard deviation 1
Values 9 7.3 9.2
[40]
SNU475 PARG
Mean 13.8
Standard deviation 1.1
Values 15 13
[41]
THLE PARG
Mean 12
Standard deviation 0.045
Values 12 12
[42]
liver PARG
Mean 8.64
Standard deviation 2.8
Values 6.1 12 7.2 8.9
[43]
ref_hepatocyte LIG1
Mean 3.08
Standard deviation 2.7
Values 7.4 3.8 0.82 2.1 1.3
[44]
HepG2 LIG1
Mean 21.1
Standard deviation 4.6
Values 18 24
[45]
HepG2.C3A LIG1
Mean 19
Standard deviation 5
Values 15 23
[46]
HuH.7 LIG1
Mean 28.4
Standard deviation 13
Values 35 13 37
[47]
SNU475 LIG1
Mean 8.05
Standard deviation 0.33
Values 8.3 7.8
[48]
THLE LIG1
Mean 15.1
Standard deviation 4
Values 12 18
[49]
liver LIG1
Mean 3.39
Standard deviation 0.66
Values 3.3 3.3 4.3 2.7
[50]
ref_hepatocyte ADPRS
Missing
[51]
HepG2 ADPRS
Missing
[52]
HepG2.C3A ADPRS
Missing
[53]
HuH.7 ADPRS
Missing
[54]
SNU475 ADPRS
Missing
[55]
THLE ADPRS
Missing
[56]
liver ADPRS
Missing