REACTOME_ANCHORING_FIBRIL_FORMATION Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 LAMC2 Laminin subunit gamma-2 [1] -8.07[2] -8.65[3] -5.47[4] -7.36[5] -6.45[6] -7.52[7]
2 LAMB3 Laminin subunit beta-3 [8] -2.55[9] -4.76[10] -1.41[11] -3.05[12] -4.25[13] -3.57[14]
3 BMP1 Bone morphogenetic protein 1 [15] 0.99[16] 0.14[17] 1.38[18] -0.28[19] -1.10[20] -0.26[21]
4 COL4A5 Collagen alpha-5(IV) chain [22] 3.52[23] -5.13[24] 2.58[25] 0.32[26] 1.37[27] -1.85[28]
5 COL4A2 Collagen alpha-2(IV) chain [29] 0.19[30] 1.16[31] 0.37[32] 4.80[33] 4.46[34] 3.97[35]
6 COL1A1 Collagen alpha-1(I) chain [36] 4.99[37] -1.87[38] 1.86[39] 4.61[40] 5.92[41] 5.17[42]
7 LAMA3 Laminin subunit alpha-3 [43] 3.78[44] 4.27[45] 2.14[46] 2.09[47] -0.85[48] 0.34[49]
8 COL7A1 Collagen alpha-1(VII) chain [50] 3.14[51] 6.77[52] 5.70[53] 3.40[54] 2.11[55] -0.91[56]
9 COL1A2 Collagen alpha-2(I) chain [57] -5.89[58] -5.17[59] -0.78[60] 2.58[61] 2.38[62] 5.24[63]
10 COL4A1 Collagen alpha-1(IV) chain [64] -2.47[65] -2.82[66] 0.44[67] 4.99[68] 4.53[69] 4.88[70]
11 COL4A6 Collagen alpha-6(IV) chain [71] 4.75[72] -3.90[73] -1.43[74] -0.98[75] 2.55[76] -2.81[77]
12 COL4A3 Collagen alpha-3(IV) chain [78] -3.04[79] -2.14[80] 1.18[81] 3.75[82] -3.71[83] 2.33[84]
13 COL4A4 Collagen alpha-4(IV) chain [85] -1.13[86] -3.32[87] 2.82[88] 5.95[89] 1.31[90] 4.82[91]
14 TLL1 Tolloid-like protein 1 [92] [93] -2.85[94] 5.38[95] -7.11[96] 2.30[97] 1.00[98]
15 TLL2 Tolloid-like protein 2 [99] 2.55[100] 1.19[101] 5.28[102] 1.29[103] -1.99[104] -0.16[105]
[1]
ref_hepatocyte LAMC2
Mean 23.7
Standard deviation 33
Values 0.29 46 72 0.22 0.16
[2]
HepG2 LAMC2
Mean 0.163
Standard deviation 0.037
Values 0.19 0.14
[3]
HepG2.C3A LAMC2
Mean 0.0618
Standard deviation 0.019
Values 0.049 0.075
[4]
HuH.7 LAMC2
Mean 0.144
Standard deviation 0.059
Values 0.09 0.13 0.21
[5]
SNU475 LAMC2
Mean 1.39
Standard deviation 1.2
Values 0.55 2.2
[6]
THLE LAMC2
Mean 3.45
Standard deviation 1.6
Values 2.3 4.6
[7]
liver LAMC2
Mean 0.419
Standard deviation 0.1
Values 0.45 0.3 0.39 0.54
[8]
ref_hepatocyte LAMB3
Mean 23
Standard deviation 34
Values 0.028 30 80 4.1 1.7
[9]
HepG2 LAMB3
Mean 7.27
Standard deviation 7
Values 12 2.3
[10]
HepG2.C3A LAMB3
Mean 0.893
Standard deviation 0.026
Values 0.87 0.91
[11]
HuH.7 LAMB3
Mean 2.34
Standard deviation 0.23
Values 2.6 2.1 2.4
[12]
SNU475 LAMB3
Mean 26.8
Standard deviation 6.3
Values 22 31
[13]
THLE LAMB3
Mean 15.4
Standard deviation 3.8
Values 13 18
[14]
liver LAMB3
Mean 6.28
Standard deviation 1
Values 6.7 5.2 5.7 7.5
[15]
ref_hepatocyte BMP1
Mean 4.74
Standard deviation 2
Values 3.6 8.1 4.8 3.4 3.8
[16]
HepG2 BMP1
Mean 17.4
Standard deviation 1.6
Values 19 16
[17]
HepG2.C3A BMP1
Mean 5.5
Standard deviation 0.036
Values 5.5 5.5
[18]
HuH.7 BMP1
Mean 3.31
Standard deviation 0.52
Values 3.7 2.7 3.4
[19]
SNU475 BMP1
Mean 37.7
Standard deviation 14
Values 47 28
[20]
THLE BMP1
Mean 28.1
Standard deviation 4
Values 31 25
[21]
liver BMP1
Mean 12.8
Standard deviation 3.2
Values 12 11 10 17
[22]
ref_hepatocyte COL4A5
Mean 1.22
Standard deviation 2.3
Values 5.3 0.58 0 0.069 0.15
[23]
HepG2 COL4A5
Mean 25.8
Standard deviation 4.1
Values 23 29
[24]
HepG2.C3A COL4A5
Mean 0.0365
Standard deviation 0.024
Values 0.019 0.054
[25]
HuH.7 COL4A5
Mean 1.95
Standard deviation 2.1
Values 0.85 4.4 0.63
[26]
SNU475 COL4A5
Mean 14.6
Standard deviation 6.5
Values 19 10
[27]
THLE COL4A5
Mean 39.9
Standard deviation 4.9
Values 36 43
[28]
liver COL4A5
Mean 1.09
Standard deviation 1
Values 0.4 2.6 0.59 0.78
[29]
ref_hepatocyte COL4A2
Mean 0.513
Standard deviation 0.39
Values 0 0.18 0.81 0.78 0.8
[30]
HepG2 COL4A2
Mean 1.08
Standard deviation 0.47
Values 1.4 0.75
[31]
HepG2.C3A COL4A2
Mean 1.2
Standard deviation 0.062
Values 1.2 1.2
[32]
HuH.7 COL4A2
Mean 0.178
Standard deviation 0.11
Values 0.25 0.23 0.056
[33]
SNU475 COL4A2
Mean 137
Standard deviation 66
Values 1.8e+02 90
[34]
THLE COL4A2
Mean 144
Standard deviation 70
Values 94 1.9e+02
[35]
liver COL4A2
Mean 26
Standard deviation 16
Values 6.2 43 20 35
[36]
ref_hepatocyte COL1A1
Mean 0.396
Standard deviation 0.34
Values 0.021 0.18 0.62 0.31 0.85
[37]
HepG2 COL1A1
Mean 23.3
Standard deviation 12
Values 15 32
[38]
HepG2.C3A COL1A1
Mean 0.114
Standard deviation 0.051
Values 0.078 0.15
[39]
HuH.7 COL1A1
Mean 0.386
Standard deviation 0.18
Values 0.55 0.41 0.2
[40]
SNU475 COL1A1
Mean 93.4
Standard deviation 25
Values 76 1.1e+02
[41]
THLE COL1A1
Mean 304
Standard deviation 1.2e+02
Values 2.2e+02 3.9e+02
[42]
liver COL1A1
Mean 46
Standard deviation 44
Values 24 30 1.1e+02 19
[43]
ref_hepatocyte LAMA3
Mean 0.394
Standard deviation 0.27
Values 0.19 0.87 0.29 0.35 0.27
[44]
HepG2 LAMA3
Mean 10
Standard deviation 3.2
Values 12 7.7
[45]
HepG2.C3A LAMA3
Mean 7.99
Standard deviation 3.7
Values 5.4 11
[46]
HuH.7 LAMA3
Mean 0.467
Standard deviation 0.18
Values 0.48 0.64 0.28
[47]
SNU475 LAMA3
Mean 16.2
Standard deviation 10
Values 24 8.8
[48]
THLE LAMA3
Mean 2.8
Standard deviation 0.21
Values 2.7 2.9
[49]
liver LAMA3
Mean 1.61
Standard deviation 1.2
Values 0.66 2.4 0.49 2.9
[50]
ref_hepatocyte COL7A1
Mean 0.37
Standard deviation 0.42
Values 0.58 0.036 0.13 1 0.081
[51]
HepG2 COL7A1
Mean 6.03
Standard deviation 2.3
Values 7.7 4.4
[52]
HepG2.C3A COL7A1
Mean 42.3
Standard deviation 7.3
Values 47 37
[53]
HuH.7 COL7A1
Mean 5.19
Standard deviation 4.1
Values 2.2 9.9 3.5
[54]
SNU475 COL7A1
Mean 37.6
Standard deviation 16
Values 26 49
[55]
THLE COL7A1
Mean 20.4
Standard deviation 0.33
Values 20 21
[56]
liver COL7A1
Mean 0.638
Standard deviation 0.54
Values 0.16 1 0.18 1.2
[57]
ref_hepatocyte COL1A2
Mean 0.368
Standard deviation 0.45
Values 0 0.065 0.43 0.23 1.1
[58]
HepG2 COL1A2
Mean 0.0114
Standard deviation 0.0081
Values 0.0057 0.017
[59]
HepG2.C3A COL1A2
Mean 0.0107
Standard deviation 0.015
Values 0 0.021
[60]
HuH.7 COL1A2
Mean 0.0577
Standard deviation 0.036
Values 0.09 0.064 0.019
[61]
SNU475 COL1A2
Mean 21.3
Standard deviation 0.8
Values 21 22
[62]
THLE COL1A2
Mean 24.5
Standard deviation 0.21
Values 25 24
[63]
liver COL1A2
Mean 44.8
Standard deviation 24
Values 20 51 76 32
[64]
ref_hepatocyte COL4A1
Mean 0.353
Standard deviation 0.31
Values 0 0.11 0.76 0.43 0.46
[65]
HepG2 COL4A1
Mean 0.117
Standard deviation 0.069
Values 0.17 0.069
[66]
HepG2.C3A COL4A1
Mean 0.0526
Standard deviation 0.047
Values 0.019 0.086
[67]
HuH.7 COL4A1
Mean 0.129
Standard deviation 0.08
Values 0.19 0.16 0.037
[68]
SNU475 COL4A1
Mean 108
Standard deviation 58
Values 1.5e+02 67
[69]
THLE COL4A1
Mean 104
Standard deviation 59
Values 62 1.5e+02
[70]
liver COL4A1
Mean 33.7
Standard deviation 21
Values 8.2 58 32 36
[71]
ref_hepatocyte COL4A6
Mean 0.221
Standard deviation 0.41
Values 0.95 0.052 0.084 0.017 0
[72]
HepG2 COL4A6
Mean 11
Standard deviation 3.2
Values 8.7 13
[73]
HepG2.C3A COL4A6
Mean 0.0156
Standard deviation 0.0083
Values 0.0097 0.021
[74]
HuH.7 COL4A6
Mean 0.022
Standard deviation 0.012
Values 0.025 0.032 0.0094
[75]
SNU475 COL4A6
Mean 1.08
Standard deviation 0.73
Values 0.57 1.6
[76]
THLE COL4A6
Mean 16.5
Standard deviation 3.5
Values 14 19
[77]
liver COL4A6
Mean 0.102
Standard deviation 0.098
Values 0 0.043 0.15 0.21
[78]
ref_hepatocyte COL4A3
Mean 0.0635
Standard deviation 0.097
Values 0 0.23 0.062 0 0.024
[79]
HepG2 COL4A3
Mean 0.0143
Standard deviation 0.004
Values 0.011 0.017
[80]
HepG2.C3A COL4A3
Mean 0.0151
Standard deviation 0.0062
Values 0.019 0.011
[81]
HuH.7 COL4A3
Mean 0.0386
Standard deviation 0.023
Values 0.033 0.064 0.019
[82]
SNU475 COL4A3
Mean 8.22
Standard deviation 7.6
Values 14 2.9
[83]
THLE COL4A3
Mean 0.0618
Standard deviation 0.0046
Values 0.065 0.059
[84]
liver COL4A3
Mean 1.03
Standard deviation 0.79
Values 0.47 0.83 0.64 2.2
[85]
ref_hepatocyte COL4A4
Mean 0.0509
Standard deviation 0.081
Values 0 0.19 0.046 0.0086 0.0081
[86]
HepG2 COL4A4
Mean 0.0429
Standard deviation 0.012
Values 0.052 0.034
[87]
HepG2.C3A COL4A4
Mean 0.00536
Standard deviation 0.0076
Values 0 0.011
[88]
HuH.7 COL4A4
Mean 0.0969
Standard deviation 0.052
Values 0.13 0.12 0.037
[89]
SNU475 COL4A4
Mean 30.4
Standard deviation 30
Values 52 9.1
[90]
THLE COL4A4
Mean 1.61
Standard deviation 0.54
Values 1.2 2
[91]
liver COL4A4
Mean 4.66
Standard deviation 2.8
Values 2.9 4.2 2.7 8.8
[92]
ref_hepatocyte TLL1
Mean 0.0333
Standard deviation 0.027
Values 0 0.049 0.049 0.06 0.0081
[93]
HepG2 TLL1
Mean 0
Standard deviation 0
Values 0 0
[94]
HepG2.C3A TLL1
Mean 0.00486
Standard deviation 0.0069
Values 0.0097 0
[95]
HuH.7 TLL1
Mean 0.372
Standard deviation 0.36
Values 0.14 0.79 0.19
[96]
SNU475 TLL1
Mean 0.00232
Standard deviation 0.0033
Values 0.0046 0
[97]
THLE TLL1
Mean 2.09
Standard deviation 0.73
Values 1.6 2.6
[98]
liver TLL1
Mean 0.216
Standard deviation 0.11
Values 0.12 0.31 0.13 0.3
[99]
ref_hepatocyte TLL2
Mean 0.0235
Standard deviation 0.032
Values 0 0 0 0.06 0.057
[100]
HepG2 TLL2
Mean 0.254
Standard deviation 0.035
Values 0.23 0.28
[101]
HepG2.C3A TLL2
Mean 0.056
Standard deviation 0.0033
Values 0.058 0.054
[102]
HuH.7 TLL2
Mean 0.246
Standard deviation 0.13
Values 0.3 0.096 0.34
[103]
SNU475 TLL2
Mean 0.554
Standard deviation 0.18
Values 0.68 0.43
[104]
THLE TLL2
Mean 0.0751
Standard deviation 0.014
Values 0.065 0.085
[105]
liver TLL2
Mean 0.0679
Standard deviation 0.053
Values 0 0.11 0.051 0.11