REACTOME_2_LTR_CIRCLE_FORMATION Return to index
Order Gene Description ref_hepatocyte HepG2 HepG2.C3A HuH.7 SNU475 THLE liver
1 XRCC6 X-ray repair cross-complementing protein 6 [1] -0.10[2] -0.15[3] -0.08[4] -0.32[5] -0.54[6] 0.01[7]
2 BANF1 Barrier-to-autointegration factor [8] -2.12[9] -1.70[10] -2.25[11] -1.35[12] -1.97[13] -1.34[14]
3 HMGA1 High mobility group protein HMG-I/HMG-Y [15] 0.63[16] -0.11[17] 0.25[18] -0.23[19] 0.45[20] -3.39[21]
4 XRCC5 X-ray repair cross-complementing protein 5 [22] 0.96[23] 1.38[24] 1.13[25] 1.37[26] 1.12[27] 1.62[28]
5 PSIP1 PC4 and SFRS1-interacting protein [29] -1.21[30] 0.10[31] 0.61[32] 1.04[33] 1.59[34] 0.73[35]
6 LIG4 DNA ligase 4 [36] -1.31[37] 0.91[38] -0.31[39] 1.32[40] 0.65[41] 2.97[42]
7 XRCC4 DNA repair protein XRCC4 [43] -0.69[44] 1.22[45] 0.88[46] 0.74[47] 0.25[48] 0.73[49]
[1]
ref_hepatocyte XRCC6
Mean 131
Standard deviation 74
Values 1.7e+02 2.4e+02 1.2e+02 73 58
[2]
HepG2 XRCC6
Mean 289
Standard deviation 39
Values 2.6e+02 3.2e+02
[3]
HepG2.C3A XRCC6
Mean 200
Standard deviation 42
Values 1.7e+02 2.3e+02
[4]
HuH.7 XRCC6
Mean 220
Standard deviation 54
Values 2.6e+02 1.6e+02 2.4e+02
[5]
SNU475 XRCC6
Mean 132
Standard deviation 1.1
Values 1.3e+02 1.3e+02
[6]
THLE XRCC6
Mean 176
Standard deviation 61
Values 1.3e+02 2.2e+02
[7]
liver XRCC6
Mean 67.3
Standard deviation 21
Values 80 58 89 42
[8]
ref_hepatocyte BANF1
Mean 94
Standard deviation 30
Values 1.3e+02 1.2e+02 82 60 77
[9]
HepG2 BANF1
Mean 51.3
Standard deviation 3.2
Values 49 54
[10]
HepG2.C3A BANF1
Mean 49.2
Standard deviation 10
Values 42 56
[11]
HuH.7 BANF1
Mean 35
Standard deviation 13
Values 36 22 47
[12]
SNU475 BANF1
Mean 46.4
Standard deviation 4.2
Values 49 43
[13]
THLE BANF1
Mean 47.2
Standard deviation 7.6
Values 42 53
[14]
liver BANF1
Mean 19
Standard deviation 19
Values 35 2.4 37 2
[15]
ref_hepatocyte HMGA1
Mean 79
Standard deviation 95
Values 27 1.3e+02 2.3e+02 6.2 10
[16]
HepG2 HMGA1
Mean 291
Standard deviation 1.5e+02
Values 3.9e+02 1.9e+02
[17]
HepG2.C3A HMGA1
Mean 124
Standard deviation 23
Values 1.1e+02 1.4e+02
[18]
HuH.7 HMGA1
Mean 167
Standard deviation 39
Values 2e+02 1.2e+02 1.8e+02
[19]
SNU475 HMGA1
Mean 84.9
Standard deviation 63
Values 41 1.3e+02
[20]
THLE HMGA1
Mean 212
Standard deviation 88
Values 1.5e+02 2.7e+02
[21]
liver HMGA1
Mean 3.84
Standard deviation 3.2
Values 7.1 0.86 6 1.4
[22]
ref_hepatocyte XRCC5
Mean 49.2
Standard deviation 25
Values 80 72 28 35 31
[23]
HepG2 XRCC5
Mean 227
Standard deviation 47
Values 1.9e+02 2.6e+02
[24]
HepG2.C3A XRCC5
Mean 218
Standard deviation 87
Values 1.6e+02 2.8e+02
[25]
HuH.7 XRCC5
Mean 192
Standard deviation 57
Values 2.4e+02 1.3e+02 2.1e+02
[26]
SNU475 XRCC5
Mean 160
Standard deviation 1.4
Values 1.6e+02 1.6e+02
[27]
THLE XRCC5
Mean 209
Standard deviation 38
Values 1.8e+02 2.4e+02
[28]
liver XRCC5
Mean 77.5
Standard deviation 10
Values 78 81 87 63
[29]
ref_hepatocyte PSIP1
Mean 11.3
Standard deviation 8.9
Values 22 19 5.5 3.2 5.9
[30]
HepG2 PSIP1
Mean 11.6
Standard deviation 0.53
Values 11 12
[31]
HepG2.C3A PSIP1
Mean 20.6
Standard deviation 2.5
Values 19 22
[32]
HuH.7 PSIP1
Mean 30.6
Standard deviation 9.2
Values 35 20 37
[33]
SNU475 PSIP1
Mean 29.1
Standard deviation 2.1
Values 31 28
[34]
THLE PSIP1
Mean 66.5
Standard deviation 7.6
Values 72 61
[35]
liver PSIP1
Mean 9.56
Standard deviation 3.2
Values 14 8.5 9.9 6.1
[36]
ref_hepatocyte LIG4
Mean 2.34
Standard deviation 2.7
Values 1.1 7.2 0.77 1.2 1.4
[37]
HepG2 LIG4
Mean 2.23
Standard deviation 0.57
Values 1.8 2.6
[38]
HepG2.C3A LIG4
Mean 7.5
Standard deviation 2.4
Values 9.2 5.8
[39]
HuH.7 LIG4
Mean 3.33
Standard deviation 0.78
Values 2.8 4.2 2.9
[40]
SNU475 LIG4
Mean 7.33
Standard deviation 1.1
Values 6.6 8.1
[41]
THLE LIG4
Mean 7.2
Standard deviation 1
Values 7.9 6.5
[42]
liver LIG4
Mean 9.32
Standard deviation 2.7
Values 8.1 13 8.1 7.7
[43]
ref_hepatocyte XRCC4
Mean 1.95
Standard deviation 0.62
Values 2.8 1.4 1.3 2 2.3
[44]
HepG2 XRCC4
Mean 2.86
Standard deviation 0.8
Values 2.3 3.4
[45]
HepG2.C3A XRCC4
Mean 7.71
Standard deviation 4.4
Values 4.6 11
[46]
HuH.7 XRCC4
Mean 6.38
Standard deviation 0.78
Values 6.3 5.6 7.2
[47]
SNU475 XRCC4
Mean 4.1
Standard deviation 0.37
Values 3.8 4.4
[48]
THLE XRCC4
Mean 4.53
Standard deviation 0.45
Values 4.2 4.9
[49]
liver XRCC4
Mean 1.65
Standard deviation 0.81
Values 1.8 1.4 2.7 0.77