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Sites
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Genotyping Services
Who
Has My
Genetically Engineered Mouse/ES Cell Clone?
NIH KnockOut Mouse Project (KOMP) Federation of International Mouse Resources (FIMRe)
International Knockout Mouse Consortium (IKMC)
European Conditional Mouse Mutagenesis Program (EUCOMM)
Texas A&M Institute of Genomic Medicine (TIGM)
Unitrap Database of Gene Trapped ES Cell Clones
Canadian Mouse Mutant Repository (CMMR)
Center for Animal Resources and Development Database (CARD)
European Mouse Mutant Archive (EMMA)
Japan Mouse/Rat Strain Resources Database
Taconic Knockout RepositorySanger KOMP
Targeted
Mutagenesis
International Gene Trap
Consortium
European Conditional Mouse
Mutagenesis
Program
Sanger
Institute
Genetrap
Resource
Baylor
Mouse
Mutagenesis Center for Developmental Defects
CMHD
Mutagenesis Core
and Gene Trap Core
International
Mouse Mutagenesis Consortium (IMMC)
Riken
Large Scale Mutagenesis
Project
Stem Cells at the
National Academies
See
also
Trans-NIH
Mouse Initiative
More Mouse
Databases - Has Someone
Made Your Cre or Conditional Mouse?
Brian Condie's
Cre Transgenic Database
Cre Mouse Portal at The Jackson Laboratory
Andras Nagy's Cre-X-Mice:
A Database of Cre
Transgenic Lines
Mouse
Cre Database at the Institut Clinique de la Souris
Cre Zoo Database at the Fleming
Institute
Mutant
Mouse Regional
Resource Centers
The Jackson
Laboratory Induced Mutant Resource
Onformation
Resources for Animal Welfare and Alternatives
Guide
for the Care and Use of Laboratory Animals (1996)
Online Atlases of Mouse Developmental Anatomy
Edinburgh Mouse Atlas Project (EMAP)
Edinburgh Mouse Atlas Project Anatomy Browser
Edinburgh Mouse Atlas Project 3D Digital Atlas
Duke Center for In Vivo Microscopy Mouse Atlas
Mouse Biomedical Research Informatics Network (BIRN) Atlasing Toolkit
Caltech µMRI Atlas of Mouse Development
NIEHS Developing Heart Images
For password to database see
Allen Institute for Brain Science: Developing Mouse Brain Atlas
Mouse Diffusion Tensor Imaging Atlas of Developing Mouse Brains at BIRN
Laboratory of Neuro Imaging at UCLA: Mouse Atlas Project
The Electronic Prenatal Mouse Brain Atlas
Vascular Atlas of the Developing Mouse Embryo
The Mouse Anatomical Dictionary
In Situ
Hybridization Mouse
Gene Expression Databases
Edinburgh Mouse Atlas of Gene Expression (EMAGE)
Gene Expression Database (GXD)
Gene Expression Database Notebook
GenePaint Digital Atlas of Gene Expression
EURExpress Transcriptome Atlas
The Allen Developing Mouse Brain Atlas
GENSAT Brain Atlas of Gene Expression
Preimplantation Embryo Whole Mount in situ Hybridization
GenitoUrinary Development Molecular Anatomy Project (GUDMAP)
European Renal Genome Projet Kidney Atlas
Genomic Libraries
of Gene
Expression
Mouse Atlas of Gene Expression
GermSAGE: Male Germ Cell Transcriptome
GonadSAGE: Male Embryonic Gonad Transcriptome
ArrayExpress Gene Expression Atlas
Gene Expression Database in 4D
Cerebellar Development Transcriptome Database
Baylor
College of Medicine Genetically Engineered Mouse Core
Case Western
Reserve
University Transgenesis
and Targeting Service
Columbia-Presbyterian
Cancer Center Transgenic Mouse Research Center
Duke University Trangenic
Mouse Facility
Emory
University Transgenic
Mouse
Core Facility
Johns
Hopkins
University
Transgenic Core Laboratory
Indiana
University School of Medicine Transgenic & Knockout Mouse
Massachusetts
General Hospital Transgenic Core
Medical
College of
Georgia
Mouse Embryonic Stem Cell and Transgenesis Core Laboratories
Medical
College
of Wisconsin Transgenic Core Facility
Medical
University of South Carolina in Charleston Transgenic Core
Mount
Sinai School of Medicine, Mouse Genetics Shared
Resource Facility
New
York
University Cancer Institute Transgenic Mouse/Embryonic Stem Cell
Chimera
Facility
Northwestern
University Transgenic and Targeted Mutagenesis Core Facility
Ohio State University Transgenic
Animal
Facility
Oregon Health
and Science
University Transgenics/Gene Targeting
Facility
Penn
State
College
of Medicine Transgenic Core Research Facility
Princeton
University
Transgenic Core Facility
Purdue
University Transgenic Mouse Core Facility
Roswell
Park Cancer Institute Gene Targeting and Transgenics
Facility
Stanford
Transgenic
Research
Facility Shared Resource
SUNY-Stony
Brook
Transgenic Mouse
and ES-cell Facility
Thomas Jefferson
University
Transgenic and Gene Targeting Facility
Tufts-New
England Medical Center Transgenic Core Facility
Tulane
University
Transgenic
Mouse Facility
University of
Alabama,
Birmingham Transgenic Mouse Facility
University
of
Albany Transgenic Mouse Core
University
of Arizona Cancer Center Genetically Engineered Mouse Shared Service
University
of California, Davis Murine Targeted
Genomics
Laboratory
University of
California,
Irvine
Transgenic Mouse Facility
University of California,
Los Angeles
Transgenic Mouse Facility
University
of Chicago Transgenic Core
University
of Cincinnati Gene Targeted Mouse Facility
University
of
Cincinnati
Transgenic Mouse Facility
University
of
Colorado, Boulder, Transgenic Facility
University
of
Colorado Health Science Center Transgenic and Gene Targeting Core
University of
Illinois,
Chicago,
Transgenic Production Service
University
of
Iowa, Transgenic Animal Facility
University of Kansas
Transgenic and
Gene
Targeting Institutional Facility
University
of KentuckyTransgenic Facility
University of
Massachusetts
Transgenic
Animal Modeling Core
University of
Michigan
Transgenic Animal
Model Core
University
of Minnesota Mouse Genetics Laboratory
University of
Missouri,
Columbia
University
of Medicine and Dentistry of New Jersey Transgenic Core Facility
Universty of Nevada Transgenic Center
University
of North Carolina at Chapel Hill
University of Pennsylvania
Transgenic and
Chimeric Mouse Facility
University
of
Rochester Medical Center Transgenic Facility
University
of
Texas at
Austin Mouse Genetic Engineering Facility
University
of Texas Health Science Center at Houston
University
of Texas
Health
Science Center at San Antonio
University
of Texas
M.D.
Anderson Cancer Center
University of Texas Medical
Branch
Transgenic Mouse Facility
Universtity of Texas Southwestern Medical Center
at Dallas
Transgenic Core Facility
University
of
Utah
Transgenic/Gene Targeting Facility
University
of Virginia Gene Targeting and Transgenic Facility
University
of
Washington Transgenic Animal Resources
University
of Wisconsin Biotechnology Center, Transgenic Animal Facility
Vanderbilt
University
Transgenic Mouse/ES Cell Shared Resource
Virginia
Commonwealth
University Transgenic Mouse Core Facility
Wadsworth
Center,
New York
State Department of Health, Transgenic and Gene-Knockout Mouse Facility
Washington University School
of Medicine
Mouse
Genetics Core
CMMT/CGDN Transgenic Core Facility
Searching the Web for Mouse Models of Human
Disease and
Genetically
Altered Mouse Strains.
The
number of genetically engineered mice available for study is rapidly
increasing. Considerable savings in animal life and research dollars
are
possible when existing transgenic or gene targeted mouse strains can be
used
for experimental studies. In addition, investigators may find that a
spontaneous mouse mutant may provide insight into their research
questions.
Unfortunately, there is no single comprehensive repository for all
genetically
altered mice.We list vendors that have
mice for sale.
In addition, there are information databases which describe mouse
models.
The Jackson Laboratory in Bar Harbor, Maine, has a large number of
mouse
strains for distribution. Lines with specific genetic alterations can
be found
by searching various databases for the Induced Mutant Resource, the
Mouse
Mutant Resource, and the Lane List of Named Mutations Maintained at the
Jackson
Laboratory.
http://www.jax.org/imr/imr_info.html.
The Jackson Laboratory Induced Mutant Resource of genetically engineered mice can be searched over the internet. The database lists several disease model categories. For example, there are 47 listings in the Strain Category of Breast Cancer of the search form (http://www.jax.org/pub-cgi/imrpub.sh?objtype=rptquery). Linking to the first listing takes us to information on a mouse with an experimentally induced mutation in the ataxia telangiectasia gene. Another takes us to the Mouse Locus Catalog entry and a detailed comparison of human disease and the phenotype of this mouse model, including 10 references.
The Jackson Laboratory also maintains the Mouse Genome Database. This excellent source of information includes information on spontaneous mouse mutants. When spina bifida is entered as a search term in the phenotype field of the "Genes, Markers and Phenotypes Query Form" (http://www.informatics.jax.org/locus.html), 8 known mouse genes are returned. Linking to the first gene in the list returns a description of mice with the "curly tail" mutation and 18 research papers.
The Transgenic/Targeted Mutation Database (TBase) hosted at The Jackson Laboratory. Selecting mouse in the common name of organism filed and entering muscular dystrophy as the search term in the phenotype field of the search form (http://tbase.jax.org/docs/tb.html) returns a list of mouse lines related to this disease. Linking to the first mouse line on the list provides a detailed description of the line and links to other related lines.
Access to the Mouse Knock-Out and Mutation database is obtained through BioMedNet (http://biomednet.com/db/mkmd). Enter arthritis into the search filed and 8 published studies of arthritis models that use gene targeted mice are retrieved.
Frontiers in Bioscience also maintains a database of gene knockout mice at http://www.bioscience.org/knockout/knochome.htm. Genes are listed in alphabetical order, with links to published research papers.
The Medical Research Council's Mammalian Genetics Unit at Harwell, UK, has more than 200 mouse strains available for distribution. These include both genetically engineered mice and spontaneous mutants. A searchable database is available at http://www.mgu.har.mrc.ac.uk/facilities/stocklist/
The National Institute of Genetics of Japan lists more than 100 strains of mice available for study at http://www.shigen.nig.ac.jp/mouse/strain/index_e.php
A more limited number of transgenic, gene targeted, and mutant mouse lines are also available from commercial vendors such as: Charles River Laboratory , Taconic, and Harlan Sprague Dawley. B & K Universal offer a partial listing of their available mice.
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